Pre_GI: BLASTP Hits

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Query: NC_020134:1783000:1794372 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 1794372, End: 1795247, Length: 876

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_000918:246792:2511582511582522311074Aquifex aeolicus VF5, complete genomehypothetical protein5e-37154
NC_017096:260333:263762263762264679918Caldisericum exile AZM16c01, complete genomeputative CRISPR-associated protein1e-61236
NC_010803:483713:4935824935824946071026Chlorobium limicola DSM 245, complete genomeCRISPR-associated autoregulator, DevR family2e-0756.6
NC_020134:2067476:207264920726492073572924Clostridium stercorarium subsp. stercorarium DSM 8532, completeCRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP3e-66251
NC_013216:921377:926369926369927241873Desulfotomaculum acetoxidans DSM 771, complete genomeCRISPR-associated autoregulator, DevR family1e-75283
NC_014206:1467000:147334014733401474227888Geobacillus sp. C56-T3 chromosome, complete genomeCRISPR-associated regulatory protein, DevR family2e-62239
NC_015557:583475:594898594898595884987Hydrogenobaculum sp. 3684 chromosome, complete genomeCRISPR-associated autoregulator DevR family2e-1170.1
NC_020411:583503:594926594926595912987Hydrogenobaculum sp. HO, complete genomeCRISPR-associated autoregulator, Cst2 family2e-1170.1
NC_015587:583530:594953594953595939987Hydrogenobaculum sp. SHO chromosome, complete genomeCRISPR-associated autoregulator DevR family2e-1170.1
NC_015975:1056731:107375210737521074642891Lactobacillus ruminis ATCC 27782 chromosome, complete genomecrispr-associated regulatory protein, devr family7e-82303
NC_005823:1105524:112770811277081128547840Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130fruiting body developmental protein6e-0755.1
NC_004342:3164500:317168531716853172524840Leptospira interrogans serovar Lai str. 56601 chromosome I,fruiting body developmental protein R-like protein6e-0755.1
NC_000916:983500:1004466100446610056411176Methanothermobacter thermautotrophicus str. Delta H, completehypothetical protein2e-23109
NC_008095:8837612:886532288653228866230909Myxococcus xanthus DK 1622, complete genomefruiting body developmental protein R (CRISPR-associated)7e-0754.7
NC_012440:1249941:125768112576811258613933Persephonella marina EX-H1, complete genomecrispr-associated regulatory protein, devr family4e-58225
NC_000961:135493:1482051482051492151011Pyrococcus horikoshii OT3, complete genomehypothetical protein8e-0651.2
NC_015966:1316901:132113813211381322067930Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeCRISPR-associated autoregulator, DevR family2e-1479.7
NC_016051:460624:4722094722094733901182Thermococcus sp. AM4 chromosome, complete genomeCRISPR-associated negative autoregulator, DevR family6e-24111
NC_013894:1:112271122712216990Thermocrinis albus DSM 14484 chromosome, complete genomeCRISPR-associated autoregulator, DevR family2e-37156
NC_013510:1023348:1038181103818110392421062Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated autoregulator, DevR family1e-0860.5
NC_011978:699500:7074087074087084241017Thermotoga neapolitana DSM 4359, complete genomeCRISPR-associated autoregulator, Cst2 family2e-1790.1
NC_009486:1103915:111510111151011116099999Thermotoga petrophila RKU-1 chromosome, complete genomeCRISPR-associated autoregulator DevR family protein1e-21103