Pre_GI: BLASTP Hits

Some Help

Query: NC_020134:1783000:1793623 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 1793623, End: 1794375, Length: 753

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014150:1423758:142302114230211423761741Brachyspira murdochii DSM 12563 chromosome, complete genomeCRISPR-associated protein Cas53e-41168
NC_013216:921377:927228927228927980753Desulfotomaculum acetoxidans DSM 771, complete genomeCRISPR-associated protein Cas55e-44177
NC_015975:1056731:107299510729951073765771Lactobacillus ruminis ATCC 27782 chromosome, complete genomeCRISPR-associated protein Cas52e-35149
NC_014206:1467000:147422414742241474931708Geobacillus sp. C56-T3 chromosome, complete genomeCRISPR-associated protein Cas5 family6e-2097.8
NC_012440:1249941:125918912591891259950762Persephonella marina EX-H1, complete genomecrispr-associated protein Cas5, tneap subtype7e-1270.9
NC_020134:2067476:207363720736372074347711Clostridium stercorarium subsp. stercorarium DSM 8532, completecrispr-associated protein Cas5, tneap subtype2e-52205
NC_000918:246792:250518250518251177660Aquifex aeolicus VF5, complete genomehypothetical protein4e-0962
NC_017096:260333:264676264676265395720Caldisericum exile AZM16c01, complete genomeputative CRISPR-associated protein4e-22105