Pre_GI: BLASTP Hits

Some Help

Query: NC_020134:1783000:1790736 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 1790736, End: 1791239, Length: 504

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015571:290355:301917301917302348432Porphyromonas gingivalis TDC60, complete genomeCRISPR-associated Cas4 family protein2e-1064.7
NC_009718:1024000:103147610314761031967492Fervidobacterium nodosum Rt17-B1, complete genomeCRISPR-associated Cas4 family protein3e-1994.4
NC_009486:1103915:111150711115071112025519Thermotoga petrophila RKU-1 chromosome, complete genomeCRISPR-associated Cas4 family protein3e-24110
NC_015634:2492771:250495025049502505366417Bacillus coagulans 2-6 chromosome, complete genomeCRISPR-associated Cas4 family protein5e-0753.5
NC_013799:1117750:112633411263341126840507Hydrogenobacter thermophilus TK-6, complete genomeCRISPR-associated exonuclease1e-21102
NC_016609:5986500:599181659918165992322507Niastella koreensis GR20-10 chromosome, complete genomeCRISPR-associated exonuclease, Cas4 family2e-24111
NC_014935:1047411:106079910607991061296498Nitratifractor saLSUginis DSM 16511 chromosome, complete genomecrispr-associated exonuclease, cas4 family1e-0755.5
NC_011978:699500:711549711549712067519Thermotoga neapolitana DSM 4359, complete genomeCRISPR-associated exonuclease, Cas4 family3e-24110
NC_017161:1117741:112619211261921126698507Hydrogenobacter thermophilus TK-6 chromosome, complete genomeCRISPR-associated exonuclease, Cas4 family1e-21102
NC_016884:3219030:325076832507683251280513Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeCRISPR-associated exonuclease, Cas4 family1e-1168.9
NC_016610:2489415:249990424999042500434531Tannerella forsythia ATCC 43037 chromosome, complete genomeCRISPR-associated protein Cas43e-25114
NC_014206:1467000:147714614771461477643498Geobacillus sp. C56-T3 chromosome, complete genomeCRISPR-associated protein Cas43e-22104
NC_015387:2072237:208160920816092082127519Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein Cas47e-1889.7
NC_013526:567500:579081579081579578498Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated protein Cas44e-1684
NC_013510:1023348:104243710424371042946510Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated protein Cas42e-1478.2
NC_015975:1056731:107010810701081070596489Lactobacillus ruminis ATCC 27782 chromosome, complete genomeCRISPR-associated protein Cas41e-33141
NC_015680:841783:847106847106847621516Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated protein Cas45e-26116
NC_015865:685882:698981698981699493513Thermococcus sp. 4557 chromosome, complete genomeCRISPR-associated protein Cas41e-24112
NC_002950:2098454:210559221055922106104513Porphyromonas gingivalis W83, complete genomeCRISPR-associated protein Cas46e-1890.1
NC_013926:974668:979781979781980266486Aciduliprofundum boonei T469 chromosome, complete genomeCRISPR-associated protein Cas46e-1580.1
NC_014915:332784:346954346954347463510Geobacillus sp. Y412MC52 chromosome, complete genomeCRISPR-associated protein Cas42e-1272
NC_015757:2343193:237269823726982373210513Sulfobacillus acidophilus TPY chromosome, complete genomeCRISPR-associated protein Cas41e-1168.9
NC_010003:2056000:207511620751162075628513Petrotoga mobilis SJ95, complete genomeCRISPR-associated protein Cas45e-0857
NC_013216:921377:930256930256930744489Desulfotomaculum acetoxidans DSM 771, complete genomeCRISPR-associated protein Cas49e-38155
NC_019942:1370872:137681713768171377323507Aciduliprofundum sp. MAR08-339, complete genomeCRISPR-associated protein Cas47e-29126
NC_010803:483713:499042499042499542501Chlorobium limicola DSM 245, complete genomeCRISPR-associated protein Cas48e-25112
NC_013501:1881692:189948418994841900026543Rhodothermus marinus DSM 4252, complete genomeCRISPR-associated protein Cas45e-22103
NC_014209:2204515:220833822083382208835498Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CRISPR-associated protein Cas42e-1995.1
NC_015589:3053504:306256030625603063066507Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeCRISPR-associated protein Cas47e-1993.2
NC_019897:3251639:328650232865023287020519Thermobacillus composti KWC4 chromosome, complete genomeCRISPR-associated protein Cas46e-1580.1
NC_014624:140000:147799147799148293495Eubacterium limosum KIST612 chromosome, complete genomeCRISPR-associated protein Cas45e-1373.9
NC_007955:1198994:121052612105261211125600Methanococcoides burtonii DSM 6242, complete genomeCRISPR-associated protein Cas42e-31135
NC_014150:1423758:142606014260601426563504Brachyspira murdochii DSM 12563 chromosome, complete genomeCRISPR-associated protein Cas42e-24111
NC_015966:1316901:132550513255051326047543Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeCRISPR-associated protein Cas45e-22103
NC_012440:1249941:126312012631201263632513Persephonella marina EX-H1, complete genomecrispr-associated protein Cas46e-1993.2
NC_011296:1039749:107237610723761072879504Thermodesulfovibrio yellowstonii DSM 11347, complete genomeCRISPR-associated protein Cas42e-1581.6
NC_021184:823000:830924830924831430507Desulfotomaculum gibsoniae DSM 7213, complete genomeCRISPR-associated protein Cas42e-1375.1
NC_008148:258292:274071274071274559489Rubrobacter xylanophilus DSM 9941, complete genomeCRISPR-associated protein Cas49e-1269.3
NC_009715:873280:880351880351880848498Campylobacter curvus 525.92 chromosome, complete genomeCRISPR-associated protein Cas43e-1064.3
NC_016051:460624:468237468237468773537Thermococcus sp. AM4 chromosome, complete genomeCRISPR-associated RecB family exonuclease Cas4a4e-1994
NC_000916:983500:100064310006431001170528Methanothermobacter thermautotrophicus str. Delta H, completehypothetical protein3e-33140
NC_000961:135493:153401153401153889489Pyrococcus horikoshii OT3, complete genomehypothetical protein3e-1787.8
NC_000918:246792:246281246281246814534Aquifex aeolicus VF5, complete genomehypothetical protein3e-25114
NC_007681:482445:488317488317488814498Methanosphaera stadtmanae DSM 3091, complete genomepredicted exonuclease3e-1787.8
NC_007681:1082000:108938810893881089909522Methanosphaera stadtmanae DSM 3091, complete genomepredicted RecB family exonuclease1e-21102
NC_009921:1668306:168463116846311685146516Frankia sp. EAN1pec, complete genomeprotein of unknown function DUF836e-1270.1
NC_017096:260333:267628267628268137510Caldisericum exile AZM16c01, complete genomeputative CRISPR-associated protein2e-1788.6
NC_021184:504728:527639527639528124486Desulfotomaculum gibsoniae DSM 7213, complete genomeRecB family exonuclease1e-0962.4