Pre_GI: BLASTP Hits

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Query: NC_020134:134875:145277 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 145277, End: 145588, Length: 312

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010003:1360472:138164213816421382154513Petrotoga mobilis SJ95, complete genomeregulatory protein MarR2e-1580.9
NC_015152:272500:278645278645279199555Spirochaeta sp. Buddy chromosome, complete genomeregulatory protein MarR5e-1372.8
NC_011653:748844:762556762556763053498Thermosipho africanus TCF52B, complete genometranscriptional regulator3e-1270.5
NC_009654:866124:879358879358879678321Marinomonas sp. MWYL1, complete genomeAsnC family transcriptional regulator2e-1167.8
NC_015732:1636368:163994016399401640536597Spirochaeta caldaria DSM 7334 chromosome, complete genomeregulatory protein MarR6e-1166.2
NC_011979:1590432:162327616232761623887612Geobacter sp. FRC-32, complete genometranscriptional regulator, MarR family3e-1063.9
NC_019902:626934:630913630913631215303Thioalkalivibrio nitratireducens DSM 14787, complete genomeTranscriptional regulator, MarR family5e-1063.2
NC_014394:3036758:306398730639873064325339Gallionella capsiferriformans ES-2 chromosome, complete genomeregulatory protein MarR7e-1062.8
NC_013959:2892660:292141229214122921759348Sideroxydans lithotrophicus ES-1 chromosome, complete genomeregulatory protein MarR3e-0960.5
NC_009659:2523874:255783725578372558202366Janthinobacterium sp. Marseille chromosome, complete genomeMarR family transcriptional regulator5e-0960.1
NC_016026:997225:100198610019861002627642Micavibrio aeruginosavorus ARL-13 chromosome, complete genomeMarR family transcriptional regulator domain-containing protein4e-0960.1
NC_007908:1328832:133154413315441331948405Rhodoferax ferrireducens T118, complete genomehypothetical protein2e-0857.8
NC_012968:1108687:111286511128651113257393Methylotenera mobilis JLW8, complete genomeputative transcriptional regulator3e-0857
NC_002977:1198438:120200712020071202387381Methylococcus capsulatus str. Bath, complete genomehypothetical protein4e-0856.6
NC_008340:2614000:262657926265792626956378Alkalilimnicola ehrlichei MLHE-1, complete genomeputative transcriptional regulator, AsnC family2e-0754.3
NC_008789:835909:840678840678841052375Halorhodospira halophila SL1, complete genometranscriptional regulator, MarR family3e-0753.9
NC_010424:1778459:179752217975221797950429Candidatus Desulforudis audaxviator MP104C, complete genomehypothetical protein1e-0652
NC_015850:217495:229914229914230282369Acidithiobacillus caldus SM-1 chromosome, complete genomeMarR family transcriptional regulator1e-0652
NC_014506:1482401:149384814938481494156309Sulfurimonas autotrophica DSM 16294 chromosome, complete genomeAsnC family transcriptional regulator2e-0651.2
NC_010723:3133302:3133302313330231351611860Clostridium botulinum E3 str. Alaska E43, complete genomecholine/ethanolamine kinase family protein7e-0649.3
NC_015850:761500:7669117669117679181008Acidithiobacillus caldus SM-1 chromosome, complete genomeMarR family transcriptional regulator8e-0649.3