Pre_GI: BLASTP Hits

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Query: NC_020134:1328302:1331646 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 1331646, End: 1332338, Length: 693

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009012:3204696:3205863320586332069751113Clostridium thermocellum ATCC 27405, complete genomeIntegrase, catalytic region2e-112404
NC_002967:1804412:1804412180441218054881077Treponema denticola ATCC 35405, complete genomeISTde2, transposase7e-35147
NC_010321:244371:2503022503022513451044Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeintegrase catalytic subunit4e-25114
NC_013921:1614397:1629322162932216303651044Thermoanaerobacter italicus Ab9 chromosome, complete genomeIntegrase catalytic region4e-25114
NC_010320:1949852:1966054196605419670971044Thermoanaerobacter sp. X514 chromosome, complete genomeintegrase catalytic subunit2e-24112
NC_014538:985339:9872479872479882901044Thermoanaerobacter sp. X513 chromosome, complete genomeIntegrase catalytic region2e-24112
NC_014721:11437:4066640666417481083Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase catalytic region4e-24111
NC_014721:2135500:2135505213550521365871083Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeintegrase catalytic region4e-24111
NC_014721:2135500:2185716218571621867971082Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete4e-24111
NC_015958:2527376:2541519254151925425621044Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeintegrase catalytic subunit1e-22106
NC_020134:205000:2094132094132104831071Clostridium stercorarium subsp. stercorarium DSM 8532, completetransposase for insertion-like sequence element IS11614e-1995.1
NC_020134:1173000:1174298117429811753681071Clostridium stercorarium subsp. stercorarium DSM 8532, completetransposase for insertion-like sequence element IS11614e-1995.1
NC_009012:3204696:3204696320469632057661071Clostridium thermocellum ATCC 27405, complete genomeIntegrase, catalytic region4e-1995.1
NC_014721:729942:7464717464717488692399Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete4e-1891.7
NC_008262:381323:3823233823233833751053Clostridium perfringens SM101, complete genomeIS1470, transposase1e-1789.7
NC_014721:135982:1418521418521442512400Caldicellulosiruptor kristjanssonii 177R1B chromosome, complete3e-1478.6
NC_008529:1514000:1527553152755315285781026Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeTransposase, IS30 family3e-1478.6
NC_008054:1502210:1516392151639215174411050Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeTransposase4e-1478.2
NC_008054:1502210:151280315128031513483681Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete5e-1478.2
NC_015385:1875671:1904199190419919052361038Treponema succinifaciens DSM 2489 chromosome, complete genomeIntegrase catalytic region1e-1170.1
NC_008262:297960:3104373104373115951159Clostridium perfringens SM101, complete genome2e-1066.2
NC_010080:1911932:1944241194424119453231083Lactobacillus helveticus DPC 4571, complete genometransposase3e-0962
NC_014727:1136589:1156317115631711573511035Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,transposase, is30 family1e-0860.5
NC_014727:95875:1039931039931050421050Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,transposase, is30 family9e-0960.5
NC_008054:1649160:168572116857211686179459Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete9e-0960.5
NC_008054:1815723:182230018223001822860561Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete9e-0960.5
NC_014727:1832144:183972318397231840580858Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,transposase, is30 family2e-0859.7
NC_015420:35384:353843538436205822Lactobacillus buchneri NRRL B-30929 plasmid pLBUC01, complete2e-0858.9
NC_009437:2579161:258557725855772585891315Caldicellulosiruptor saccharolyticus DSM 8903, complete genomehypothetical protein3e-0755.5
NC_008054:1194000:1200024120002412010581035Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeTransposase5e-0754.7
NC_016048:3261166:3269334326933432703891056Oscillibacter valericigenes Sjm18-20, complete genomeputative transposase for insertion sequence element9e-0753.9
NC_010556:1292232:132555813255581326496939Exiguobacterium sibiricum 255-15, complete genomeIntegrase catalytic region6e-0651.2
NC_008526:74500:8548585485865011017Lactobacillus casei ATCC 334, complete genomeTransposase, IS30 family6e-0651.2