Pre_GI: BLASTP Hits

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Query: NC_019896:1483073:1484188 Bacillus subtilis subsp. subtilis str. BSP1 chromosome, complete

Start: 1484188, End: 1484718, Length: 531

Host Lineage: Bacillus subtilis; Bacillus; Bacillaceae; Bacillales; Firmicutes; Bacteria

General Information: This organism was one of the first bacteria studied, and was named Vibrio subtilis in 1835 and renamed Bacillus subtilis in 1872. It is one of the most well characterized bacterial organisms, and is a model system for cell differentiation and development. This soil bacterium can divide asymmetrically, producing an endospore that is resistant to environmental factors such as heat, acid, and salt, and which can persist in the environment for long periods of time. The endospore is formed at times of nutritional stress, allowing the organism to persist in the environment until conditions become favorable. Prior to the decision to produce the spore the bacterium might become motile, through the production of flagella, and also take up DNA from the environment through the competence system. The sporulation process is complex and involves the coordinated regulation of hundreds of genes in the genome. This initial step results in the coordinated asymmetric cellular division and endospore formation through multiple stages that produces a single spore from the mother cell.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010337:2793667:280469028046902805241552Heliobacterium modesticaldum Ice1, complete genomeRNA polymerase sigma factor2e-45181
NC_007517:3151742:315661031566103157230621Geobacter metallireducens GS-15, complete genomeRNA polymerase sigma-70 factor8e-41166
NC_018866:108812:128036128036128620585Dehalobacter sp. DCA chromosome, complete genomeRNA polymerase sigma factor SigZ1e-27122
NC_018867:179975:195631195631196215585Dehalobacter sp. CF chromosome, complete genomeRNA polymerase sigma factor SigZ1e-27122
NC_019904:5130458:514084151408415141389549Echinicola vietnamensis DSM 17526 chromosome, complete genomesigma-70 family RNA polymerase sigma factor2e-22105
NC_008781:2981868:298748929874892988013525Polaromonas naphthalenivorans CJ2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-1994.7
NC_014910:2779573:279193627919362792454519Alicycliphilus denitrificans BC chromosome, complete genomeRNA polymerase sigma factor, sigma-70 family1e-1685.9
NC_003909:1205605:122684212268421227327486Bacillus cereus ATCC 10987, complete genomeRNA polymerase sigma-70 factor4e-1373.9
NC_015172:1075592:107559210755921076101510Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-1272
NC_012483:1567253:158365615836561584234579Acidobacterium capsulatum ATCC 51196, complete genomeRNA polymerase sigma-70 factor, ECF subfamily1e-1169.3
NC_004193:1335626:133948713394871340014528Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase ECF-type sigma factor3e-1167.8
NC_012483:1408500:143124014312401431812573Acidobacterium capsulatum ATCC 51196, complete genomesigma-70 factor domain protein1e-1066.2
NC_006510:1731939:175291017529101753395486Geobacillus kaustophilus HTA426, complete genomeDNA-directed RNA polymerase ECF-type sigma factor3e-1064.7
NC_015660:1918307:191991019199101920395486Geobacillus thermoglucosidasius C56-YS93 chromosome, completeECF subfamily RNA polymerase sigma-24 subunit3e-1064.7
NC_015844:1188360:120641312064131207012600Zobellia galactanivorans, complete genomeRNA polymerase ECF-type sigma factor4e-1064.3
NC_019897:329945:346389346389346979591Thermobacillus composti KWC4 chromosome, complete genomesigma-70 family RNA polymerase sigma factor8e-1063.2
NC_014650:1893758:189647118964711896956486Geobacillus sp. Y4.1MC1 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit1e-0962.4
NC_015846:790374:805927805927806496570Capnocytophaga canimorsus Cc5 chromosome, complete genomesigma-W factor2e-0962
NC_015589:2019370:202926920292692029814546Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesigma-70 family RNA polymerase sigma factor2e-0962
NC_016631:5378810:537881053788105379649840Granulicella mallensis MP5ACTX8 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-0962
NC_011830:1190502:120506412050641205564501Desulfitobacterium hafniense DCB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0962
NC_017208:5339331:535609453560945356621528Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeRNA polymerase sigma factor4e-0960.8
NC_010475:2188827:218983121898312190430600Synechococcus sp. PCC 7002, complete genometranscription initiation factor sigma E6e-0960.5
NC_013406:2866000:2867473286747328686931221Paenibacillus sp. Y412MC10 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor8e-0960.1
NC_016048:2907702:297798929779892978513525Oscillibacter valericigenes Sjm18-20, complete genomeputative RNA polymerase ECF subfamily sigma factor7e-0960.1
NC_008700:2451798:247336124733612474008648Shewanella amazonensis SB2B, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-0960.1
NC_009012:3224000:322403932240393224593555Clostridium thermocellum ATCC 27405, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0960.1
NC_014829:178000:186205186205186768564Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-0959.7
NC_014335:5038601:505489950548995055426528Bacillus cereus biovar anthracis str. CI chromosome, completeRNA polymerase sigma-70 factor9e-0959.7
NC_011961:304158:307073307073307639567Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily1e-0859.7
NC_012673:1540000:154720815472081547783576Exiguobacterium sp. AT1b, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0859.3
NC_012472:5126186:514219551421955142722528Bacillus cereus 03BB102, complete genomeRNA polymerase sigma-70 factor, ECF subfamily1e-0859.3
NC_016779:5079460:509547950954795096006528Bacillus cereus F837/76 chromosome, complete genomeECF subfamily RNA polymerase sigma-70 factor1e-0859.3
NC_014393:4541000:454485545448554545400546Clostridium cellulovorans 743B chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0859.3
NC_008600:5113765:512978451297845130407624Bacillus thuringiensis str. Al Hakam, complete genomeRNA polymerase sigma-70 factor, ECF subfamily1e-0859.3
NC_010505:5967324:597965759796575980331675Methylobacterium radiotolerans JCM 2831, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.9
NC_008536:2961460:296649229664922967064573Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.5
NC_011773:5144990:516152451615245162051528Bacillus cereus AH820 chromosome, complete genomeRNA polymerase sigma factor2e-0858.5
NC_013166:1149760:116568711656871166253567Kangiella koreensis DSM 16069, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.5
NC_005957:5091150:510720551072055107735531Bacillus thuringiensis serovar konkukian str. 97-27, completeRNA polymerase sigma-70 factor3e-0858.2
NC_007907:2306561:230812823081282308652525Desulfitobacterium hafniense Y51, complete genomehypothetical protein3e-0858.2
NC_015277:2283530:229844122984412299025585Sphingobacterium sp. 21 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0858.2
NC_020126:1274071:129318212931821293763582Myxococcus stipitatus DSM 14675, complete genomeECF family RNA polymerase sigma factor2e-0858.2
NC_012880:3982383:400842040084204008974555Dickeya dadantii Ech703, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0857.8
NC_006350:1938631:196639319663931966929537Burkholderia pseudomallei K96243 chromosome 1, complete sequenceRNA polymerase sigma-70 factor3e-0857.8
NC_014171:1018338:103091910309191031539621Bacillus thuringiensis BMB171 chromosome, complete genomeRNA polymerase ECF-type sigma factor4e-0857.8
NC_010995:2547164:254810525481052548695591Cellvibrio japonicus Ueda107, complete genomeRNA polymerase sigma-H factor (Sigma-30)4e-0857.8
NC_021182:3409199:341352734135273414072546Clostridium pasteurianum BC1, complete genomeRNA polymerase sigma factor, sigma-70 family4e-0857.8
NC_011566:3994239:399821439982143998792579Shewanella piezotolerans WP3, complete genomeRNA polymerse sigmaE factor5e-0857.4
NC_015589:1899329:190623419062341906758525Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesigma-70 family RNA polymerase sigma factor5e-0857.4
NC_011386:3723019:373535037353503735937588Oligotropha carboxidovorans OM5, complete genomeRNA polymerase sigma factor4e-0857.4
NC_011772:5222917:524277052427705243297528Bacillus cereus G9842, complete genomeRNA polymerase sigma-70 factor, ECF subfamily5e-0857
NC_015953:4908069:492497149249714925813843Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit5e-0857
NC_006274:5155395:517165151716515172184534Bacillus cereus E33L, complete genomeRNA polymerase sigma-70 factor6e-0857
NC_010172:1522707:154378715437871544350564Methylobacterium extorquens PA1, complete genomeRNA polymerase sigma factor, sigma-70 family6e-0857
NC_016627:762000:776639776639777193555Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor8e-0856.6
NC_011830:3369282:338259733825973383103507Desulfitobacterium hafniense DCB-2, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily7e-0856.6
NC_011567:139598:151917151917152480564Anoxybacillus flavithermus WK1, complete genomeDNA-directed RNA polymerase specialized sigma subunit7e-0856.6
NC_014829:4422314:442603644260364426554519Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily9e-0856.2
NC_007298:2170181:217566021756602176259600Dechloromonas aromatica RCB, complete genomeRNA polymerase sigma-70 factor9e-0856.2
NC_013037:5395951:539916253991625399872711Dyadobacter fermentans DSM 18053, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0756.2
NC_016048:2678205:270587327058732706352480Oscillibacter valericigenes Sjm18-20, complete genomeRNA polymerase ECF subfamily sigma factor1e-0756.2
NC_012581:5085915:510147551014755102002528Bacillus anthracis str. CDC 684 chromosome, complete genomeRNA polymerase sigma factor1e-0756.2
NC_008435:854576:876605876605877288684Rhodopseudomonas palustris BisA53, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0756.2
NC_004193:241480:250169250169250732564Oceanobacillus iheyensis HTE831, complete genomeRNA polymerase sigma-70 factor1e-0755.8
NC_009438:1282022:129610312961031296681579Shewanella putrefaciens CN-32 chromosome, complete genomeRNA polymerase sigma factor RpoE2e-0755.5
NC_008750:3435495:343614234361423436720579Shewanella sp. W3-18-1, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.5
NC_014375:1146328:117242311724231172977555Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.5
NC_018750:3964784:398322139832213983961741Streptomyces venezuelae ATCC 10712, complete genomeRNA polymerase sigma-70 factor2e-0755.1
NC_012982:711122:746813746813747382570Hirschia baltica ATCC 49814, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.1
NC_010337:2848360:286534728653472865868522Heliobacterium modesticaldum Ice1, complete genomeRNA polymerase sigma-70, region 42e-0755.1
NC_008536:5192235:520608052060805206640561Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0755.1
NC_011134:1360122:136463013646301365100471Streptococcus equi subsp. zooepidemicus str. MGCS10565, completeRNA polymerase ECF-type sigma factor2e-0755.1
NC_014758:10687:185401854018992453Calditerrivibrio nitroreducens DSM 19672 chromosome, completeRNA polymerase, sigma-24 subunit, ecf subfamily3e-0754.7
NC_013943:1019213:103299510329951033477483Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit4e-0754.3
NC_012225:1657248:166270016627001663245546Brachyspira hyodysenteriae WA1, complete genomeR polymerase sigma-70 factor 24e-0754.3
NC_017243:424132:440723440723441268546Brachyspira intermedia PWS/A chromosome, complete genomeR polymerase sigma-70 factor 24e-0754.3
NC_020272:3706722:372792437279243728487564Bacillus amyloliquefaciens IT-45, complete genomeRNA polymerase sigma factor SigW4e-0754.3
NC_020410:198000:198744198744199307564Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeRNA polymerase ECF(Extracytoplasmic function)-type sigma factor W4e-0754.3
NC_014551:199500:199660199660200223564Bacillus amyloliquefaciens DSM 7, complete genomeRNA polymerase ECF(extracytoplasmic function)-type sigma factor W4e-0754.3
NC_017188:177500:177639177639178202564Bacillus amyloliquefaciens TA208 chromosome, complete genomeRNA polymerase sigma factor SigW4e-0754.3
NC_017190:182449:182449182449183012564Bacillus amyloliquefaciens LL3 chromosome, complete genomeRNA polymerase sigma factor4e-0754.3
NC_017191:183500:183549183549184112564Bacillus amyloliquefaciens XH7 chromosome, complete genomeRNA polymerase sigma factor SigW4e-0754.3
NC_013037:2231006:224359722435972244193597Dyadobacter fermentans DSM 18053, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0753.9
NC_014933:602312:614199614199614702504Bacteroides helcogenes P 36-108 chromosome, complete genomeRNA polymerase, sigma subunit, ECF family5e-0753.9
NC_008536:3160540:318629731862973186758462Solibacter usitatus Ellin6076, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily5e-0753.9
NC_009615:3581619:358324535832453583757513Parabacteroides distasonis ATCC 8503 chromosome, complete genomeRNA polymerase ECF-type sigma factor7e-0753.5
NC_008358:263458:267448267448268089642Hyphomonas neptunium ATCC 15444, complete genomeRNA polymerase sigma-70 factor, ECF family7e-0753.5
NC_011969:5063283:507947350794735080006534Bacillus cereus Q1 chromosome, complete genomeRNA polymerase sigma factor6e-0753.5
NC_016622:1599681:160103816010381601589552Azospirillum lipoferum 4B, complete genomeECF family sigma factor6e-0753.5
NC_011831:2795819:281806128180612818645585Chloroflexus aggregans DSM 9485, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily6e-0753.5
NC_013061:3390399:339834033983403398918579Pedobacter heparinus DSM 2366, complete genomeRNA polymerase sigma-70 factor1e-0653.1
NC_004557:558500:573257573257573847591Clostridium tetani E88, complete genomeRNA polymerase sigma-70 factor1e-0652.8
NC_012704:1747539:176790617679061768508603Corynebacterium kroppenstedtii DSM 44385, complete genomeECF-family sigma factor H1e-0652.8
NC_013595:3952196:396014139601413960653513Streptosporangium roseum DSM 43021, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0652.8
NC_012660:1579204:161309716130971613678582Pseudomonas fluorescens SBW25 chromosome, complete genomeRNA polymerase sigma factor AlgU1e-0652.8
NC_009454:1577319:163526116352611635848588Pelotomaculum thermopropionicum SI, complete genomeDNA-directed RNA polymerase specialized sigma subunit1e-0652.8
NC_018665:139646:154042154042154605564Exiguobacterium antarcticum B7 chromosome, complete genomeRNA polymerase sigma factor SigW2e-0652.4
NC_007677:241846:245884245884246468585Salinibacter ruber DSM 13855, complete genomepossible sigma-70 factor, ECF subfamily, putative2e-0652.4
NC_016627:4270949:428432542843254284810486Clostridium clariflavum DSM 19732 chromosome, complete genomesigma-70 family RNA polymerase sigma factor1e-0652.4
NC_011725:1032500:104531410453141045847534Bacillus cereus B4264 chromosome, complete genomeRNA polymerase factor sigma C1e-0652.4
NC_010556:141374:154091154091154654564Exiguobacterium sibiricum 255-15, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily1e-0652.4
NC_016112:1735044:174948717494871749993507Methylomicrobium alcaliphilum chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit2e-0652
NC_021177:4124839:414665741466574147223567Streptomyces fulvissimus DSM 40593, complete genomeRNA polymerase ECF-subfamily sigma factor2e-0652
NC_010322:768849:792731792731793237507Pseudomonas putida GB-1 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 factor2e-0652
AC_000091:4501430:452239445223944522915522Escherichia coli W3110 DNA, complete genomeRNA polymerase, sigma 19 factor2e-0652
NC_010473:4596500:461754546175454618066522Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; RNA polymerase, sigma 19 factor2e-0652
NC_012759:4433500:445447244544724454993522Escherichia coli BW2952 chromosome, complete genomeRNA polymerase sigma factor FecI2e-0652
NC_016822:4889656:489396448939644894485522Shigella sonnei 53G, complete genomeRNA polymerase sigma factor FecI2e-0652
NC_015436:440033:442515442515443042528Spirochaeta coccoides DSM 17374 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0651.6
NC_008542:2631138:264774226477422648323582Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceRNA polymerase, sigma-24 subunit, ECF subfamily2e-0651.6
NC_011831:2795819:281678328167832817325543Chloroflexus aggregans DSM 9485, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily2e-0651.6
NC_015953:3782302:380522238052223805776555Streptomyces sp. SirexAA-E chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit3e-0651.2
NC_013440:1727134:174839817483981749084687Haliangium ochraceum DSM 14365, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0651.2
NC_015172:850802:875550875550876032483Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0651.2
NC_011894:2747491:276819727681972768877681Methylobacterium nodulans ORS 2060, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily3e-0651.2
NC_013061:2288134:229508222950822295651570Pedobacter heparinus DSM 2366, complete genomeRNA polymerase sigma factor, sigma-70 family3e-0651.2
NC_013730:2490000:249877424987742499262489Spirosoma linguale DSM 74, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily4e-0651.2
NC_014032:269844:274798274798275382585Salinibacter ruber M8 chromosome, complete genomeRNA polymerase sigma factor5e-0650.8
NC_021184:3174500:320020332002033200760558Desulfotomaculum gibsoniae DSM 7213, complete genomeRNA polymerase sigma factor, sigma-70 family4e-0650.8
NC_015589:3241364:324630432463043246867564Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesigma-70 family RNA polymerase sigma factor5e-0650.4
NC_011772:1011220:102153510215351022068534Bacillus cereus G9842, complete genomeRNA polymerase sigma-70 factor, ECF subfamily6e-0650.4
NC_015673:464630:467907467907468443537Corynebacterium resistens DSM 45100 chromosome, complete genomeECF-family sigma factor W6e-0650.4
NC_009012:2953638:301233430123343012897564Clostridium thermocellum ATCC 27405, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0650.1
NC_015577:383071:383071383071383628558Treponema azotonutricium ZAS-9 chromosome, complete genomeECF subfamily RNA polymerase sigma-24 subunit8e-0650.1
NC_015496:2279829:228225522822552282800546Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomeRNA polymerase, sigma-24 subunit, ECF subfamily8e-0650.1
NC_015589:2281054:228795522879552288491537Desulfotomaculum ruminis DSM 2154 chromosome, complete genomesigma-70 family RNA polymerase sigma factor9e-0649.7
NC_009615:2902871:291847629184762919027552Parabacteroides distasonis ATCC 8503 chromosome, complete genomeRNA polymerase ECF-type sigma factor1e-0549.7