Pre_GI: BLASTP Hits

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Query: NC_018870:1417851:1428717 Thermacetogenium phaeum DSM 12270 chromosome, complete genome

Start: 1428717, End: 1429586, Length: 870

Host Lineage: Thermacetogenium phaeum; Thermacetogenium; Thermoanaerobacteraceae; Thermoanaerobacterales; Firmicutes; Bacteria

General Information: Nitrogen fixation. Thermophilic strictly anaerobic bacterium oxidizing acetate to CO2 in syntrophic association with a methanogenic partner. Capable of growing with various substrates such as alcohols and methylated nitrogen compounds, and to reduce sulfate in the presence of acetate. Isolated from sludge of an anaerobic digester run at 58 degrees C. Thermacetogenium phaeum is a strictly anaerobic, homoacetogenic bacterium. It is exceptional because it can use the homoacetogenic Wood-Ljungdahl (CO- dehydrogenase) pathway both for acetate formation and acetate oxidation. Acetate oxidation is possible only in syntrophic cooperation with a methanogenic partner which maintains a low hydrogen and/or formate concentration in the coculture. With this, the bacterium operates close to the thermodynamic equilibrium of substrate conversion, similar to other syntrophically fermenting bacteria such as Syntrophomonas wolfei the genomes of which have been sequenced as well in the recent past.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014152:554656:556201556201557064864Thermincola sp. JR, complete genometranscriptional regulator, LuxR family1e-41170
NC_013385:1064188:107668910766891077216528Ammonifex degensii KC4, complete genome1e-36154
NC_014152:554656:566782566782567639858Thermincola sp. JR, complete genometranscriptional regulator, LuxR family2e-36152
NC_013385:1064188:107107810710781071446369Ammonifex degensii KC4, complete genomehypothetical protein7e-23107
NC_019897:2696587:270251527025152703342828Thermobacillus composti KWC4 chromosome, complete genometranscriptional activator of acetoin/glycerol metabolism1e-1687.4
NC_012563:2203037:2209814220981422117091896Clostridium botulinum A2 str. Kyoto, complete genomeaor transcriptional regulator3e-1479.3
NC_009495:2056546:2063323206332320652181896Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeaor transcriptional regulator3e-1479.3
NC_009697:1985187:1991964199196419938591896Clostridium botulinum A str. ATCC 19397 chromosome, completeaor transcriptional regulator3e-1479.3
NC_009698:1985404:1992181199218119940761896Clostridium botulinum A str. Hall chromosome, complete genomeaor transcriptional regulator3e-1479.3
NC_010516:2064027:2071399207139920732941896Clostridium botulinum B1 str. Okra, complete genomeaor transcriptional regulator3e-1479.3
NC_009699:2116500:2121467212146721233621896Clostridium botulinum F str. Langeland chromosome, complete genomeaor transcriptional regulator3e-1479.3
NC_014377:2033781:2044106204410620460701965Thermosediminibacter oceani DSM 16646 chromosome, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family5e-1478.6
NC_017297:2114222:2122424212242421234641041Clostridium botulinum F str. 230613 chromosome, complete genome6e-1478.2
NC_010520:2171584:2180905218090521828001896Clostridium botulinum A3 str. Loch Maree, complete genomeaor transcriptional regulator7e-1478.2
NC_014328:2643588:2646788264678826487161929Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative sigma-54-interacting transcriptional regulator2e-1376.6
NC_014328:2643588:2659027265902726609251899Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative sigma-54-interacting transcriptional regulator1e-1273.9
NC_010723:622928:6289516289516309061956Clostridium botulinum E3 str. Alaska E43, complete genomesignal-transduction and transcriptional-control protein6e-1168.2
NC_009495:1759759:1765651176565117676031953Clostridium botulinum A str. ATCC 3502 chromosome, complete genomesignal-transduction and transcriptional-control protein1e-1067
NC_010674:658596:6637586637586657131956Clostridium botulinum B str. Eklund 17B, complete genomeaco operon expression regulatory protein3e-1066.2
NC_014551:809025:8322718322718340791809Bacillus amyloliquefaciens DSM 7, complete genometranscriptional activator of the ''acoA-acoB-acoC-acoL'' operon4e-1065.9
NC_017188:753039:7762817762817780891809Bacillus amyloliquefaciens TA208 chromosome, complete genometranscriptional activator of the acoA-acoB-acoC-acoL operon4e-1065.9
NC_017190:794820:8180628180628198701809Bacillus amyloliquefaciens LL3 chromosome, complete genometranscriptional activator of the acoA-acoB-acoC-acoL operon4e-1065.9
NC_017191:754453:7776957776957795031809Bacillus amyloliquefaciens XH7 chromosome, complete genometranscriptional regulator4e-1065.9
NC_015589:3556197:3556197355619735582122016Desulfotomaculum ruminis DSM 2154 chromosome, complete genomePAS sensor protein3e-1065.9
NC_018643:1309804:1324444132444413255321089Alpha proteobacterium HIMB5 chromosome, complete genomeDNA-binding protein with resolvase-like helix-turn-helix domain protein5e-1065.1
NC_016584:4478200:4494340449434044963011962Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional activator of acetoin/glycerol metabolism8e-1064.7
NC_018870:1953748:1969744196974419717622019Thermacetogenium phaeum DSM 12270 chromosome, complete genomesigma54 specific transcriptional regulator1e-0963.9
NC_009937:3324793:3342477334247733444201944Azorhizobium caulinodans ORS 571, complete genomesigma54 specific transcriptional regulator1e-0963.9
NC_015573:162000:1663901663901684712082Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeFis family PAS modulated sigma-54 specific transcriptional regulator2e-0963.5
NC_014034:1418681:1435179143517914369721794Rhodobacter capsulatus SB1003 chromosome, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family2e-0963.5
NC_014206:2971304:2974878297487829768091932Geobacillus sp. C56-T3 chromosome, complete genomeFis family GAF modulated sigma-54 specific transcriptional regulator1e-0963.5
NC_008593:2020473:2034360203436020363391980Clostridium novyi NT, complete genomeaco operon expression regulatory protein3e-0962.8
UCMB5137:409500:4323014323014341121812Bacillus atrophaeus UCMB-5137transcriptional regulator1e-0860.5
NC_016845:4077293:4099713409971341015001788Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative Fis-type transcriptional regulator2e-0860.1
NC_015425:2389400:2409757240975724116521896Clostridium botulinum BKT015925 chromosome, complete genomesensory box sigma-54 dependent transcriptional regulator2e-0859.7
NC_020291:744329:7523267523267542271902Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeAor transcriptional regulator3e-0859.3
NC_015573:2900906:2926688292668829286701983Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeGAF modulated Fis family sigma54 specific transcriptional regulator4e-0858.9
NC_008593:2136759:2153232215323221551271896Clostridium novyi NT, complete genomeSignal-transduction and transcriptional-control protein4e-0858.9
NC_014098:1114076:1123982112398211259551974Bacillus tusciae DSM 2912 chromosome, complete genomeGAF modulated sigma54 specific transcriptional regulator, Fis family1e-0757.8
NC_015379:3175500:318305931830593183796738Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative response regulator, NarL family1e-0757.4
NC_014220:2102000:2114839211483921167971959Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomePAS modulated sigma54 specific transcriptional regulator, Fis family2e-0756.6
NC_008826:539835:5619935619935639871995Methylibium petroleiphilum PM1 plasmid RPME01, complete sequencesigma-54 dependent transcriptional activator4e-0755.5
NC_009523:585367:6023956023956038101416Roseiflexus sp. RS-1 chromosome, complete genomeresponse regulator receiver protein5e-0755.1
NC_010552:335989:3359893359893375331545Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetranscriptional regulator, LuxR family8e-0754.7
NC_016582:6811273:682559468255946826280687Streptomyces bingchenggensis BCW-1 chromosome, complete genometwo component LuxR family transcriptional regulator8e-0754.7
NC_016830:3697173:370346837034683703962495Pseudomonas fluorescens F113 chromosome, complete genomeLuxR family transcriptional regulator7e-0754.7
NC_004129:3123000:312730831273083128099792Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, LuxR family1e-0654.3
NC_008027:3844355:386445738644573865245789Pseudomonas entomophila L48, complete genometranscriptional regulator, LuxR family1e-0654.3
NC_008148:2498000:252802925280292528718690Rubrobacter xylanophilus DSM 9941, complete genometwo component transcriptional regulator, LuxR family1e-0653.9
NC_007298:750361:757449757449758060612Dechloromonas aromatica RCB, complete genomeregulatory protein, LuxR:Response regulator receiver2e-0653.5
NC_015564:2870631:2901783290178329034231641Amycolicicoccus subflavus DQS3-9A1 chromosome, complete genomeregulatory protein LuxR2e-0653.5
NC_016582:6811273:681717068171706817877708Streptomyces bingchenggensis BCW-1 chromosome, complete genometwo component LuxR family transcriptional regulator2e-0653.1
NC_008596:6009511:605290960529096053826918Mycobacterium smegmatis str. MC2 155, complete genometwo-component regulator2e-0653.1
NC_013947:656140:678880678880679542663Stackebrandtia nassauensis DSM 44728 chromosome, complete genometwo component transcriptional regulator, LuxR family2e-0653.1
NC_014654:1581689:160007716000771600844768Halanaerobium sp. 'sapolanicus' chromosome, complete genometranscriptional regulator, LuxR family3e-0652.8
NC_007333:2674596:268305126830512683704654Thermobifida fusca YX, complete genomeregulatory protein, LuxR:Response regulator receiver7e-0651.6