Pre_GI: BLASTN Hits

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Query: NC_018581:32092 Gordonia sp. KTR9 chromosome, complete genome

Start: 32092, End: 51193, Length: 19102

Host Lineage: Gordonia; Gordonia; Gordoniaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Isolated from soil at an explosives testing facility. Can transform hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX), a cyclic nitramine explosive. Many military ranges in the United States and Canada are contaminated with explosive and propellant residues. Of the nitroaromatic and nitramine explosives that exist on these sites, hexahydro-1,3,5-trinitro-1,3,5-triazine (RDX) has a low sorption capacity and can migrate through soil into surface water and groundwater.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013441:27877*278775974431868Gordonia bronchialis DSM 43247, complete genome01023BLASTN svgBLASTP svg
NC_008705:27434*274345721729784Mycobacterium sp. KMS, complete genome6e-90339BLASTN svgBLASTP svg
NC_008146:20047*200475317433128Mycobacterium sp. MCS, complete genome6e-90339BLASTN svgBLASTP svg
NC_012522:58476995847699587179324095Rhodococcus opacus B4, complete genome5e-41176BLASTN svgBLASTP svg
NC_014151:30488*304886009929612Cellulomonas flavigena DSM 20109 chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_013947:15700001570000159398623987Stackebrandtia nassauensis DSM 44728 chromosome, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_004369:41236*412366188820653Corynebacterium efficiens YS-314, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_015514:33972*339726268928718Cellulomonas fimi ATCC 484 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_006087:28490*284907567147182Leifsonia xyli subsp. xyli str. CTCB07, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_014215:49285549285551339920545Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,2e-1385.7BLASTN svgBLASTP svg
NC_020302:1241504*1241504127635534852Corynebacterium halotolerans YIM 70093 = DSM 44683, complete2e-1385.7BLASTN svgBLASTP svg
NC_002935:48687*486876982821142Corynebacterium diphtheriae NCTC 13129, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_012590:37697*376977357935883Corynebacterium aurimucosum ATCC 700975, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_018581:11809511180951122156540615Gordonia sp. KTR9 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015312:61752*617528144419693Pseudonocardia dioxanivorans CB1190 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_013757:21245212454675925515Geodermatophilus obscurus DSM 43160, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_002935:1237585*1237585131159974015Corynebacterium diphtheriae NCTC 13129, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_011750:5045927*5045927506827722351Escherichia coli IAI39 chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_013716:5141269*5141269517008828820Citrobacter rodentium ICC168, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_018581:38710003871000389120420205Gordonia sp. KTR9 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_013169:1410384*1410384143716826785Kytococcus sedentarius DSM 20547, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_018681:53781975378197541859940403Nocardia brasiliensis ATCC 700358 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_015859:16315731631573165925327681Corynebacterium variabile DSM 44702 chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_003155:22110872211087223044019354Streptomyces avermitilis MA-4680, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010572:12937861293786131684623061Streptomyces griseus subsp. griseus NBRC 13350, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015656:3232809*3232809325197319165Frankia symbiont of Datisca glomerata chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015671:20114622011462203421622755Cellvibrio gilvus ATCC 13127 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015957:2678544*2678544271162733084Streptomyces violaceusniger Tu 4113 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_018750:69506956950695697113120437Streptomyces venezuelae ATCC 10712, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_021177:71596547159654718278823135Streptomyces fulvissimus DSM 40593, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009077:33232913323291335489131601Mycobacterium sp. JLS, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008705:33776973377697340929731601Mycobacterium sp. KMS, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008146:33494153349415338101531601Mycobacterium sp. MCS, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015434:228912*22891225262723716Verrucosispora maris AB-18-032 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_009142:2480608*2480608252218941582Saccharopolyspora erythraea NRRL 2338, complete genome9e-0660BLASTN svgBLASTP svg