Pre_GI: BLASTP Hits

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Query: NC_018145:147759:147759 Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, complete

Start: 147759, End: 148916, Length: 1158

Host Lineage: Zymomonas mobilis; Zymomonas; Sphingomonadaceae; Sphingomonadales; Proteobacteria; Bacteria

General Information: Isolation: Fermenting Elaeis palm sap; Temp: Mesophile. The natural habitat of this organism includes sugar-rich plant saps where the bacterium ferments sugar to ethanol. The high conversion of sugars to ethanol makes this organism useful in industrial production systems, particularly in production of bioethanol for fuel. A recombinant strain of this bacterium is utilized for the conversion of sugars, particularly xylose, which is not utilized by another common sugar-fermenting organism such as yeast, to ethanol. Since xylose is a common breakdown product of cellulose or a waste component of the agricultural industry, it is an attractive source for ethanol production. Zymomonas mobilis was chosen for this process as it is ethanol-tolerant (up to 120 grams of ethanol per litre) and productive (5-10% more ethanol than Saccharomyces). This bacterium ferments using the Enter-Doudoroff pathway, with the result that less carbon is used in cellular biomass production and more ends up as ethanol, another factor that favors this organism for ethanol production.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006526:1202000:1218755121875512199121158Zymomonas mobilis subsp. mobilis ZM4, complete genomeDNA processing chain A0723
NC_017501:121902:1232701232701244571188Neisseria meningitidis 8013, complete genomeSmf protein (DNA processing chain A)2e-52206
NC_017513:115870:1172381172381184251188Neisseria meningitidis G2136 chromosome, complete genomeputative DNA processing protein DprA4e-52205
NC_017516:123618:1249861249861261791194Neisseria meningitidis H44/76 chromosome, complete genomeputative DNA processing protein DprA7e-52204
NC_013016:2041890:2061326206132620625131188Neisseria meningitidis alpha14 chromosome, complete genomeDNA processing protein DprA7e-52204
NC_017512:2116295:2135729213572921369161188Neisseria meningitidis WUE 2594, complete genomeSmf protein (DNA processing chain A)1e-51203
NC_010120:2055803:2075239207523920764261188Neisseria meningitidis 053442, complete genomeDNA processing chain A2e-51203
NC_015573:997629:1014479101447910155881110Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeDNA protecting protein DprA2e-47190
NC_008577:44184:4418444184452001017Shewanella sp. ANA-3 chromosome 1, complete sequenceDNA protecting protein DprA2e-45183
NC_007940:782207:793644793644794321678Rickettsia bellii RML369-C, complete genomePutative DNA processing protein DprA1e-44181
NC_015565:1647554:1647554164755416486451092Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeDNA protecting protein DprA1e-44180
NC_008752:5213431:5229981522998152312071227Acidovorax avenae subsp. citrulli AAC00-1, complete genomeDNA protecting protein DprA5e-44179
NC_014377:1060000:1062283106228310633621080Thermosediminibacter oceani DSM 16646 chromosome, complete genomeDNA protecting protein DprA1e-43177
NC_013216:1219775:1239497123949712405971101Desulfotomaculum acetoxidans DSM 771, complete genomeDNA protecting protein DprA2e-43177
NC_011992:3615517:3632024363202436331841161Acidovorax ebreus TPSY, complete genomeDNA protecting protein DprA3e-43176
NC_007798:301456:3177673177673189031137Neorickettsia sennetsu str. Miyayama, complete genomeputative DNA processing protein DprA3e-43176
NC_009883:871594:882031882031882702672Rickettsia bellii OSU 85-389, complete genomePutative DNA processing protein DprA2e-43176
NC_015422:4822636:4840955484095548420941140Alicycliphilus denitrificans K601 chromosome, complete genomeDNA protecting protein DprA1e-42174
NC_010611:208268:2082682082682093981131Acinetobacter baumannii ACICU, complete genomepredicted Rossmann fold nucleotide-binding protein2e-42173
NC_010410:3719599:3740583374058337417131131Acinetobacter baumannii AYE, complete genomeputative Rossmann-fold nucleotide-binding protein involved in DNA uptake (Smf)2e-42173
NC_014960:1735786:1790547179054717916591113Anaerolinea thermophila UNI-1, complete genomeputative DNA processing protein5e-42172
NC_015138:5276857:5295164529516452963751212Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeDNA protecting protein DprA2e-41170
NC_008260:125500:1441411441411452021062Alcanivorax borkumensis SK2, complete genomepeptide deformylase, DNA processing protein1e-40167
NC_013939:1812259:1823583182358318247191137Deferribacter desulfuricans SSM1, complete genomeDNA processing protein A8e-41167
NC_009053:1942973:1942973194297319441271155Actinobacillus pleuropneumoniae L20, complete genomeProtein smf (DNA-processing chain A)5e-40165
NC_009749:289695:309012309012309818807Francisella tularensis subsp. holarctica FTA, complete genomeDNA protecting protein DprA9e-40164
NC_014844:2056943:2061979206197920632981320Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeDNA protecting protein DprA1e-39164
NC_016826:929259:931492931492932334843Streptococcus infantarius subsp. infantarius CJ18 chromosome,DprA/SMF protein, putative DNA processingfactor1e-39164
NC_014314:576465:6619486619486630361089Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeDNA protecting protein DprA6e-39161
NC_012471:1197534:119976711997671200612846Streptococcus equi subsp. equi 4047, complete genomeSMF family protein2e-38160
NC_014328:1379437:1396457139645713975571101Clostridium ljungdahlii ATCC 49587 chromosome, complete genomeputative Smf protein2e-38160
NC_014721:434501:4426364426364437331098Caldicellulosiruptor kristjanssonii 177R1B chromosome, completeDNA protecting protein dpra5e-38158
NC_010730:578493:5826215826215836911071Sulfurihydrogenibium sp. YO3AOP1, complete genomeDNA protecting protein DprA2e-37157
NC_007880:290059:309372309372310109738Francisella tularensis subsp. holarctica, complete genome7e-37155
NC_020291:1437431:1453854145385414549121059Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeDNA protecting protein DprA3e-36153
NC_014483:1973233:1995184199518419963711188Paenibacillus polymyxa E681 chromosome, complete genomeSmf protein2e-35150
NC_010003:1360472:140726114072611408253993Petrotoga mobilis SJ95, complete genomeDNA protecting protein DprA1e-34147
NC_012438:159927:1645131645131655831071Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeDNA protecting protein DprA1e-34147
NC_014335:3589726:360138036013803602129750Bacillus cereus biovar anthracis str. CI chromosome, completenucleotide-binding protein, Smf family1e-34147
NC_008312:4555499:4555499455549945566411143Trichodesmium erythraeum IMS101, complete genomeDNA protecting protein DprA1e-34147
NC_005957:3665657:367219936721993673068870Bacillus thuringiensis serovar konkukian str. 97-27, completenucleotide-binding protein, SMF family1e-34147
NC_013282:3962188:3977295397729539784401146Cronobacter turicensis, complete genomeProtein smf9e-35147
NC_017294:758992:7621257621257632191095Candidatus Arthromitus sp. SFB-mouse-Yit, complete genomeDNA protecting protein DprA7e-34145
NC_011969:3575988:358253135825313583400870Bacillus cereus Q1 chromosome, complete genomeDNA processing protein (smf family)6e-34145
NC_006511:3364448:3382067338206733831911125Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein6e-34145
NC_008699:2418722:2419839241983924208881050Nocardioides sp. JS614, complete genomeDNA protecting protein DprA4e-34145
NC_009848:1542978:156300915630091563911903Bacillus pumilus SAFR-032, complete genomeSmf family DNA processing protein8e-34144
NC_011658:3603009:363857136385713639440870Bacillus cereus AH187 chromosome, complete genomeDNA processing Smf protein2e-33143
NC_014171:3726054:373450037345003735369870Bacillus thuringiensis BMB171 chromosome, complete genomenucleotide-binding SMF protein2e-33143
NC_003909:3606177:362592436259243626793870Bacillus cereus ATCC 10987, complete genomeDNA processing protein (smf family)2e-33143
NC_009495:2571732:2571732257173225728171086Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeDNA protecting protein DprA6e-33142
NC_018607:1865972:1865972186597218672101239Brachyspira pilosicoli B2904 chromosome, complete genomeDNA protecting protein DprA5e-33142
NC_017208:3816753:385063538506353851504870Bacillus thuringiensis serovar chinensis CT-43 chromosome, completenucleotide-binding SMF protein3e-33142
NC_005835:1773482:1775457177545717764611005Thermus thermophilus HB27, complete genomecompetence protein dprA2e-32140
NC_013199:1407742:142346114234611424276816Lactobacillus rhamnosus Lc 705, complete genomeDNA processing Smf protein / Rossmann fold nucleotide-binding protein for DNA uptake2e-32140
NC_019908:1043401:1045622104562210467641143Brachyspira pilosicoli P43/6/78 chromosome, complete genomeDNA protecting protein DprA3e-32139
NC_013162:811763:8154028154028164961095Capnocytophaga ochracea DSM 7271, complete genomeDNA protecting protein DprA3e-32139
NC_014624:2297000:2320474232047423215801107Eubacterium limosum KIST612 chromosome, complete genomeDNA protecting protein DprA7e-32138
CP002185:3627992:3645405364540536465291125Escherichia coli W, complete genomeDNA protecting protein DprA2e-31137
NC_002695:4153394:4167448416744841685721125Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-31137
NC_012440:197728:2123492123492134071059Persephonella marina EX-H1, complete genomeprotein smf (DNA-processing chain A)4e-31135
NC_010572:2216309:2217400221740022187161317Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative DNA processing Smf-family protein1e-29130
NC_007168:1705763:171998417199841720850867Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein1e-27124
NC_014643:1986440:2000796200079620022801485Rothia dentocariosa ATCC 17931 chromosome, complete genomeDNA protecting protein DprA2e-27124
NC_021177:6127431:6129765612976561308141050Streptomyces fulvissimus DSM 40593, complete genomeDNA processing Smf-family protein6e-27122
NC_007513:1764739:1788619178861917896861068Synechococcus sp. CC9902, complete genomeSMF protein8e-26118
NC_016787:1509831:1514783151478315159341152Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein8e-25115
NC_016788:1509943:1518248151824815193991152Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein8e-25115
NC_016782:1520324:1523215152321515243661152Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein8e-25115
NC_016786:1519481:1523480152348015246311152Corynebacterium diphtheriae HC01 chromosome, complete genomehypothetical protein8e-25115
NC_004461:921364:925144925144926016873Staphylococcus epidermidis ATCC 12228, complete genomeDNA processing Smf protein4e-25115
NC_016790:1480441:1490742149074214918931152Corynebacterium diphtheriae VA01 chromosome, complete genomehypothetical protein1e-24114
NC_002935:1534889:1534889153488915360401152Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein2e-24114
NC_003888:6103534:6106490610649061076381149Streptomyces coelicolor A3(2), complete genomehypothetical protein8e-24111
NC_014169:515957:523221523221524009789Bifidobacterium longum subsp. longum JDM301 chromosome, completeSMF family protein3e-23109
NC_012658:2498087:2498087249808724992441158Clostridium botulinum Ba4 str. 657 chromosome, complete genomeDNA uptake protein7e-23108
NC_017303:1420758:1436300143630014374751176Corynebacterium pseudotuberculosis I19 chromosome, complete genomeRossmann-fold nucleotide-binding protein/SMF1e-22107
NC_017301:1425293:1436222143622214373971176Corynebacterium pseudotuberculosis C231 chromosome, completeRossmann-fold nucleotide-binding protein/SMF1e-22107
NC_017300:1426975:1433834143383414350091176Corynebacterium pseudotuberculosis 1002 chromosome, completeRossmann-fold nucleotide-binding protein/SMF1e-22107
NC_014329:1407880:1436477143647714376521176Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein1e-22107
NC_016781:1408235:1436415143641514375901176Corynebacterium pseudotuberculosis 3/99-5 chromosome, completeRossmann-fold nucleotide-binding protein/SMF1e-22107
NC_015312:1265797:129858112985811299459879Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeDNA protecting protein DprA2e-22107
NC_017031:1420738:1436279143627914374541176Corynebacterium pseudotuberculosis P54B96 chromosome, completeRossmann-fold nucleotide-binding protein/SMF6e-22105
NC_014656:1161188:1172044117204411730601017Bifidobacterium longum subsp. longum BBMN68 chromosome, completesmf family protein2e-21103
NC_010408:79855:659065907543954Clavibacter michiganensis subsp. sepedonicus plasmid pCSL1,putative DNA processing SMF-family protein2e-20100
NC_010673:291679:308358308358309302945Borrelia hermsii DAH, complete genomeSmf protein3e-20100
NC_016010:1822212:185250718525071853496990Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeRossmann fold nucleotide-binding protein3e-2099.8
NC_014815:1686409:168954816895481690285738Micromonospora sp. L5 chromosome, complete genome3e-2099.8
NC_011138:318168:325983325983326870888Alteromonas macleodii 'Deep ecotype', complete genomeSMF protein6e-2099
NC_011601:846358:864090864090865049960Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein9e-2098.2
NC_008710:277207:307652307652308596945Borrelia turicatae 91E135, complete genomeSmf protein1e-1997.8
NC_010572:4181403:4190954419095441919821029Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein8e-1995.1
NC_007645:6500059:653267165326716533372702Hahella chejuensis KCTC 2396, complete genomepredicted Rossmann fold nucleotide-binding protein involved in DNA uptake7e-1892
NC_012997:4545875:458510345851034585996894Teredinibacter turnerae T7901, complete genomeSMF protein3e-1790.1
NC_016818:1605918:161583616158361616822987Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative Rossmann fold nucleotide-binding protein involved in DNA uptake4e-1789.4
NC_008687:302450:312313312313313308996Paracoccus denitrificans PD1222 chromosome 2, complete sequenceSMF family protein9e-1788.2
NC_014910:1734634:174680617468061747702897Alicycliphilus denitrificans BC chromosome, complete genomesmf family protein3e-1686.7
NC_017238:272980:304783304783305727945Borrelia afzelii PKo chromosome, complete genomeDNA protecting protein DprA3e-1686.7
NC_014833:3444550:3455787345578734569291143Ruminococcus albus 7 chromosome, complete genomeSMF family protein7e-1685.1
NC_017046:2869873:287598728759872876964978Salmonella enterica subsp. enterica serovar Typhimurium str. 798competence protein1e-1584.3
NC_016857:2871689:287724528772452878222978Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative competence protein1e-1584.3
NC_016810:2871689:287724528772452878222978Salmonella enterica subsp. enterica serovar Typhimurium strputative competence protein1e-1584.3
NC_015658:319296:327387327387328331945Halopiger xanaduensis SH-6 plasmid pHALXA01, complete sequenceSMF family protein1e-1481.3
NC_009051:1455183:148880314888031489747945Methanoculleus marisnigri JR1, complete genomeSMF family protein1e-1377.8
NC_009778:2951207:296554729655472966524978Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1377
NC_007333:810381:834415834415835383969Thermobifida fusca YX, complete genomesimilar to Rossmann fold nucleotide-binding protein involved in DNA uptake2e-1273.9
NC_016048:2873669:290451629045162905475960Oscillibacter valericigenes Sjm18-20, complete genomeputative smf protein2e-1170.5
NC_014921:777047:776319776319777050732Mycoplasma fermentans M64 chromosome, complete genomeDNA processing protein smf1e-1067.8
NC_012659:3617000:365075636507563651421666Bacillus anthracis str. A0248, complete genome2e-1067
NC_012581:559182:587166587166587831666Bacillus anthracis str. CDC 684 chromosome, complete genomeDNA processing Smf protein2e-1067
NC_005945:3636321:365142436514243652089666Bacillus anthracis str. Sterne, complete genomenucleotide-binding SMF protein2e-1067
NC_007005:4515853:4524298452429845256651368Pseudomonas syringae pv. syringae B728a, complete genomeunnamed protein product; similar to a putative DNA processing protein7e-1065.1
NC_008268:7052202:706616170661617066598438Rhodococcus sp. RHA1, complete genomehypothetical protein2e-0963.9
NC_012796:2757500:2765810276581027668201011Desulfovibrio magneticus RS-1, complete genomeSMF protein1e-0861.6
NC_014366:478000:4969284969284983131386Gamma proteobacterium HdN1, complete genomepredicted Rossmann fold nucleotide-binding protein involved in DNA uptake1e-0861.2
NC_015164:2473496:248019924801992481125927Bacteroides salanitronis DSM 18170 chromosome, complete genomeSMF family protein3e-0860.1
NC_005126:5188976:5206762520676252081831422Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-0756.6
NC_008268:7052202:705544470554447055860417Rhodococcus sp. RHA1, complete genomeSmf protein4e-0756.2
NC_013216:1335789:1338059133805913394201362Desulfotomaculum acetoxidans DSM 771, complete genomehypothetical protein3e-0653.1