Pre_GI: BLASTN Hits

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Query: NC_018080:4280401 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 4280401, End: 4308679, Length: 28279

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008463:4389721*4389721441663526915Pseudomonas aeruginosa UCBPP-PA14, complete genome013270BLASTN svgBLASTP svg
NC_002516:1236644*1236644126316626523Pseudomonas aeruginosa PAO1, complete genome011550BLASTN svgBLASTP svg
NC_011770:45915004591500460979518296Pseudomonas aeruginosa LESB58, complete genome09636BLASTN svgBLASTP svg
NC_009439:34850003485000350721722218Pseudomonas mendocina ymp, complete genome02960BLASTN svgBLASTP svg
NC_015410:3791500*3791500381292521426Pseudomonas mendocina NK-01 chromosome, complete genome02805BLASTN svgBLASTP svg
NC_015740:15943761594376161634721972Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete02767BLASTN svgBLASTP svg
NC_009434:17436961743696176409920404Pseudomonas stutzeri A1501, complete genome02763BLASTN svgBLASTP svg
NC_015556:18998501899850192183821989Pseudomonas fulva 12-X chromosome, complete genome02625BLASTN svgBLASTP svg
NC_002516:21131862113186213336720182Pseudomonas aeruginosa PAO1, complete genome02411BLASTN svgBLASTP svg
NC_005773:4282840*4282840431412131282Pseudomonas syringae pv. phaseolicola 1448A, complete genome02357BLASTN svgBLASTP svg
NC_008463:282565*28256532073638172Pseudomonas aeruginosa UCBPP-PA14, complete genome02284BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome02268BLASTN svgBLASTP svg
NC_002516:1031386*1031386109196460579Pseudomonas aeruginosa PAO1, complete genome02206BLASTN svgBLASTP svg
NC_011770:18118741811874183622424351Pseudomonas aeruginosa LESB58, complete genome01953BLASTN svgBLASTP svg
NC_008463:2467219*2467219250339236174Pseudomonas aeruginosa UCBPP-PA14, complete genome01396BLASTN svgBLASTP svg
NC_011770:2499432*2499432255697257541Pseudomonas aeruginosa LESB58, complete genome01384BLASTN svgBLASTP svg
NC_009434:20065002006500203099424495Pseudomonas stutzeri A1501, complete genome01080BLASTN svgBLASTP svg
NC_012660:52423925242392526802925638Pseudomonas fluorescens SBW25 chromosome, complete genome01021BLASTN svgBLASTP svg
NC_011901:27399842739984276222422241Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete0769BLASTN svgBLASTP svg
NC_013889:1514799*1514799153542720629Thioalkalivibrio sp. K90mix chromosome, complete genome0747BLASTN svgBLASTP svg
NC_016002:1975000*1975000202494749948Pseudogulbenkiania sp. NH8B, complete genome0658BLASTN svgBLASTP svg
NC_005085:24572952457295248428326989Chromobacterium violaceum ATCC 12472, complete genome0652BLASTN svgBLASTP svg
NC_007347:32046373204637323548530849Ralstonia eutropha JMP134 chromosome 1, complete sequence6e-159569BLASTN svgBLASTP svg
NC_019902:23720972372097239285820762Thioalkalivibrio nitratireducens DSM 14787, complete genome2e-143517BLASTN svgBLASTP svg
NC_007404:20480002048000206896120962Thiobacillus denitrificans ATCC 25259, complete genome2e-127464BLASTN svgBLASTP svg
NC_019940:13093591309359133197622618Thioflavicoccus mobilis 8321 chromosome, complete genome3e-111410BLASTN svgBLASTP svg
NC_015556:45433804543380456955726178Pseudomonas fulva 12-X chromosome, complete genome5e-110406BLASTN svgBLASTP svg
NC_011206:22391092239109225942920321Acidithiobacillus ferrooxidans ATCC 53993, complete genome2e-109404BLASTN svgBLASTP svg
NC_010645:3239420*3239420326166922250Bordetella avium 197N, complete genome3e-102381BLASTN svgBLASTP svg
NC_015942:25444072544407256835223946Acidithiobacillus ferrivorans SS3 chromosome, complete genome9e-87329BLASTN svgBLASTP svg
NC_013959:26663212666321269260826288Sideroxydans lithotrophicus ES-1 chromosome, complete genome4e-64254BLASTN svgBLASTP svg
NC_009439:3394174*3394174341925525082Pseudomonas mendocina ymp, complete genome3e-62248BLASTN svgBLASTP svg
NC_007925:39113233911323393315121829Rhodopseudomonas palustris BisB18, complete genome1e-51212BLASTN svgBLASTP svg
NC_003295:2507850*2507850254415436305Ralstonia solanacearum GMI1000, complete genome1e-51212BLASTN svgBLASTP svg
NC_015410:37010003701000372390022901Pseudomonas mendocina NK-01 chromosome, complete genome3e-46194BLASTN svgBLASTP svg
NC_007651:36564333656433367931922887Burkholderia thailandensis E264 chromosome I, complete sequence5e-42180BLASTN svgBLASTP svg
NC_007650:841408414010870224563Burkholderia thailandensis E264 chromosome II, complete sequence5e-42180BLASTN svgBLASTP svg
NC_008061:21930002193000221082217823Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence2e-41178BLASTN svgBLASTP svg
NC_008543:61000610008061919620Burkholderia cenocepacia HI2424 chromosome 2, complete sequence2e-41178BLASTN svgBLASTP svg
NC_010515:12052581205258122726722010Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence3e-40174BLASTN svgBLASTP svg
NC_005773:32205003220500325277732278Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-34155BLASTN svgBLASTP svg
NC_005773:56366065636606566314526540Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-32149BLASTN svgBLASTP svg
NC_007005:44113884411388444643035043Pseudomonas syringae pv. syringae B728a, complete genome7e-32147BLASTN svgBLASTP svg
NC_005773:4028500*4028500405209923600Pseudomonas syringae pv. phaseolicola 1448A, complete genome1e-30143BLASTN svgBLASTP svg
NC_015947:22318422318424748524302Burkholderia sp. JV3 chromosome, complete genome3e-28135BLASTN svgBLASTP svg
NC_014107:17117017117019899927830Enterobacter cloacae subsp. cloacae ATCC 13047 plasmid pECL_A,1e-27133BLASTN svgBLASTP svg
NC_008786:15538331553833157650522673Verminephrobacter eiseniae EF01-2, complete genome4e-27131BLASTN svgBLASTP svg
NC_015733:26583372658337270338145045Pseudomonas putida S16 chromosome, complete genome4e-24121BLASTN svgBLASTP svg
NC_015850:21476822147682217960631925Acidithiobacillus caldus SM-1 chromosome, complete genome3e-22115BLASTN svgBLASTP svg
NC_008095:63234566323456634843724982Myxococcus xanthus DK 1622, complete genome3e-22115BLASTN svgBLASTP svg
NC_010512:86693286693289209925168Burkholderia cenocepacia MC0-3 chromosome 3, complete sequence2e-20109BLASTN svgBLASTP svg
NC_015711:81697528169752821033740586Myxococcus fulvus HW-1 chromosome, complete genome6e-20107BLASTN svgBLASTP svg
NC_020209:5077410*5077410511615938750Pseudomonas poae RE*1-1-14, complete genome2e-19105BLASTN svgBLASTP svg
NC_010515:14286641428664144787219209Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence2e-19105BLASTN svgBLASTP svg
NC_009512:469000*46900049317124172Pseudomonas putida F1, complete genome2e-19105BLASTN svgBLASTP svg
NC_009348:2631759*2631759265138819630Aeromonas salmonicida subsp. salmonicida A449, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_014541:3642241*3642241367858636346Ferrimonas balearica DSM 9799 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_015424:25107642510764253353522772Aeromonas veronii B565 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015424:23162282316228235664140414Aeromonas veronii B565 chromosome, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_015376:33208183320818335828337466Burkholderia gladioli BSR3 chromosome chromosome 2, complete1e-1179.8BLASTN svgBLASTP svg
NC_012721:16864501686450170480118352Burkholderia glumae BGR1 chromosome 2, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014972:23716472371647239964127995Desulfobulbus propionicus DSM 2032 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_012721:770651*77065183681366163Burkholderia glumae BGR1 chromosome 2, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007510:22840002284000230620022201Burkholderia sp. 383 chromosome 1, complete sequence2e-1075.8BLASTN svgBLASTP svg
NC_008739:41793417936534823556Marinobacter aquaeolei VT8 plasmid pMAQU02, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_008740:443274*44327451891675643Marinobacter aquaeolei VT8, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011662:535613*53561355787622264Thauera sp. MZ1T, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014800:32986132986135277422914Pseudoalteromonas sp. SM9913 chromosome chromosome II, complete8e-0763.9BLASTN svgBLASTP svg
NC_009512:21086862108686214231433629Pseudomonas putida F1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_007492:45639814563981458949625516Pseudomonas fluorescens PfO-1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_002505:514732*51473255228437553Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete8e-0763.9BLASTN svgBLASTP svg
NC_009654:1729159*1729159175248223324Marinomonas sp. MWYL1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008027:2051821*2051821207333821518Pseudomonas entomophila L48, complete genome3e-0661.9BLASTN svgBLASTP svg