Pre_GI: BLASTN Hits

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Query: NC_018080:2732962 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 2732962, End: 2753704, Length: 20743

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002516:27501282750128277880428677Pseudomonas aeruginosa PAO1, complete genome014880BLASTN svgBLASTP svg
NC_011770:30498303049830308131431485Pseudomonas aeruginosa LESB58, complete genome06579BLASTN svgBLASTP svg
NC_008463:28485682848568287992931362Pseudomonas aeruginosa UCBPP-PA14, complete genome06500BLASTN svgBLASTP svg
NC_011770:18118741811874183622424351Pseudomonas aeruginosa LESB58, complete genome04157BLASTN svgBLASTP svg
NC_008463:17564341756434177764821215Pseudomonas aeruginosa UCBPP-PA14, complete genome04149BLASTN svgBLASTP svg
NC_002516:42914429146861625703Pseudomonas aeruginosa PAO1, complete genome2e-47198BLASTN svgBLASTP svg
NC_011770:42901429016842125521Pseudomonas aeruginosa LESB58, complete genome4e-45190BLASTN svgBLASTP svg
NC_021150:42019654201965423232130357Azotobacter vinelandii CA6, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_012560:42019694201969423232530357Azotobacter vinelandii DJ, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_009439:31040003104000312885524856Pseudomonas mendocina ymp, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004129:57814135781413580497523563Pseudomonas fluorescens Pf-5, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_007005:2686551*2686551274062754077Pseudomonas syringae pv. syringae B728a, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_013722:30814593081459310680725349Xanthomonas albilineans, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007508:30656213065621309125825638Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008027:4889662*4889662491964529984Pseudomonas entomophila L48, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007508:237771*23777127801540245Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_011071:10842108423591025069Stenotrophomonas maltophilia R551-3, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014623:9363409*9363409938654423136Stigmatella aurantiaca DW4/3-1 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_020126:20421620421622291418699Myxococcus stipitatus DSM 14675, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008314:26118732611873263563323761Ralstonia eutropha H16 chromosome 2, complete sequence2e-0661.9BLASTN svgBLASTP svg
NC_014972:19823151982315200871426400Desulfobulbus propionicus DSM 2032 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_013959:82686882686887209945232Sideroxydans lithotrophicus ES-1 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_002516:14740001474000150946535466Pseudomonas aeruginosa PAO1, complete genome1e-0560BLASTN svgBLASTP svg