Pre_GI: BLASTN Hits

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Query: NC_018080:1100047 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 1100047, End: 1123099, Length: 23053

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011770:1226923*1226923124809921177Pseudomonas aeruginosa LESB58, complete genome040860BLASTN svgBLASTP svg
NC_002516:4285477*4285477430981124335Pseudomonas aeruginosa PAO1, complete genome036580BLASTN svgBLASTP svg
NC_008463:1223012*1223012124137318362Pseudomonas aeruginosa UCBPP-PA14, complete genome019410BLASTN svgBLASTP svg
NC_005773:1333863*1333863135559921737Pseudomonas syringae pv. phaseolicola 1448A, complete genome0846BLASTN svgBLASTP svg
NC_011770:42901429016842125521Pseudomonas aeruginosa LESB58, complete genome9e-136492BLASTN svgBLASTP svg
NC_002516:42914429146861625703Pseudomonas aeruginosa PAO1, complete genome9e-136492BLASTN svgBLASTP svg
NC_015138:2364500*2364500238381719318Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete3e-129470BLASTN svgBLASTP svg
NC_020211:554736*55473659042335688Serratia marcescens WW4, complete genome2e-87331BLASTN svgBLASTP svg
NC_014500:443874*44387446959925726Dickeya dadantii 3937 chromosome, complete genome1e-79305BLASTN svgBLASTP svg
NC_012912:4194821*4194821421439319573Dickeya zeae Ech1591, complete genome6e-69270BLASTN svgBLASTP svg
NC_012856:15859891585989160425818270Ralstonia pickettii 12D chromosome 1, complete genome6e-66260BLASTN svgBLASTP svg
NC_015733:3736104*37361043837697101594Pseudomonas putida S16 chromosome, complete genome3e-49204BLASTN svgBLASTP svg
NC_009092:1047500*1047500107272925230Shewanella loihica PV-4, complete genome3e-49204BLASTN svgBLASTP svg
NC_012880:4117376*4117376413569218317Dickeya dadantii Ech703, complete genome7e-47196BLASTN svgBLASTP svg
NC_005085:2869159*2869159289234223184Chromobacterium violaceum ATCC 12472, complete genome3e-46194BLASTN svgBLASTP svg
NC_007963:32253063225306325338328078Chromohalobacter salexigens DSM 3043, complete genome2e-35159BLASTN svgBLASTP svg
NC_014733:107394*10739413952432131Methylovorus sp. MP688 chromosome, complete genome9e-31143BLASTN svgBLASTP svg
NC_008825:20639902063990208713723148Methylibium petroleiphilum PM1, complete genome1e-29139BLASTN svgBLASTP svg
NC_007712:3629358*3629358365546826111Sodalis glossinidius str. 'morsitans', complete genome2e-28135BLASTN svgBLASTP svg
NC_007613:4217557*4217557425611838562Shigella boydii Sb227, complete genome5e-26127BLASTN svgBLASTP svg
NC_010002:38879263887926390943921514Delftia acidovorans SPH-1, complete genome5e-26127BLASTN svgBLASTP svg
NC_010658:4494103*4494103451209917997Shigella boydii CDC 3083-94, complete genome5e-26127BLASTN svgBLASTP svg
NC_015566:547387*54738757761030224Serratia sp. AS12 chromosome, complete genome5e-26127BLASTN svgBLASTP svg
NC_015567:547500*54750057779630297Serratia sp. AS9 chromosome, complete genome5e-26127BLASTN svgBLASTP svg
NC_020063:4127161*4127161415360026440Enterobacteriaceae bacterium strain FGI 57, complete genome2e-25125BLASTN svgBLASTP svg
NC_004547:442927*44292748635443428Erwinia carotovora subsp. atroseptica SCRI1043, complete genome9e-25123BLASTN svgBLASTP svg
NC_002977:2254440*2254440228000425565Methylococcus capsulatus str. Bath, complete genome9e-25123BLASTN svgBLASTP svg
NC_010498:4821519*4821519484497023452Escherichia coli SMS-3-5, complete genome1e-23119BLASTN svgBLASTP svg
NC_015677:3339181*3339181336388124701Ramlibacter tataouinensis TTB310 chromosome, complete genome5e-23117BLASTN svgBLASTP svg
AC_000091:4472000*4472000449474322744Escherichia coli W3110 DNA, complete genome5e-20107BLASTN svgBLASTP svg
NC_000913:4462782*4462782448642323642Escherichia coli K12, complete genome5e-20107BLASTN svgBLASTP svg
NC_010473:4564590*4564590458823123642Escherichia coli str. K-12 substr. DH10B, complete genome5e-20107BLASTN svgBLASTP svg
NC_012559:10648211064821109367428854Laribacter hongkongensis HLHK9, complete genome2e-19105BLASTN svgBLASTP svg
NC_003888:2814360*2814360285868544326Streptomyces coelicolor A3(2), complete genome2e-19105BLASTN svgBLASTP svg
NC_008781:3365468*3365468340127235805Polaromonas naphthalenivorans CJ2, complete genome8e-19103BLASTN svgBLASTP svg
NC_015061:4203767*4203767424223938473Rahnella sp. Y9602 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_014752:98117*9811712709928983Neisseria lactamica ST-640, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_003116:93576*9357612141127836Neisseria meningitidis Z2491, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_008767:136958*13695816389726940Neisseria meningitidis FAM18, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_010120:2029880*2029880205559925720Neisseria meningitidis 053442, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_021177:2451000*2451000247327922280Streptomyces fulvissimus DSM 40593, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_003112:149593*14959317620526613Neisseria meningitidis MC58, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_019673:1456999*1456999147793620938Saccharothrix espanaensis DSM 44229 complete genome7e-1383.8BLASTN svgBLASTP svg
NC_019673:16566801656680168172225043Saccharothrix espanaensis DSM 44229 complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014165:2888961*2888961290818919229Thermobispora bispora DSM 43833 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015436:1758257*1758257178406425808Spirochaeta coccoides DSM 17374 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009832:622969*62296965041627448Serratia proteamaculans 568, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014225:1403007*1403007142895325947Waddlia chondrophila WSU 86-1044 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013169:1661135*1661135168009918965Kytococcus sedentarius DSM 20547, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003198:4676536*4676536471603539500Salmonella enterica subsp. enterica serovar Typhi str. CT18,4e-0867.9BLASTN svgBLASTP svg
NC_011901:3363500*3363500338699623497Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_014960:3009500*3009500302719917700Anaerolinea thermophila UNI-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013592:446092*44609246819222101Dickeya dadantii Ech586, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008319:2471341*2471341249128119941Synechococcus sp. CC9311, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_006361:18279911827991184618418194Nocardia farcinica IFM 10152, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_002939:17383317383319586722035Geobacter sulfurreducens PCA, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015690:79050079050081630625807Paenibacillus mucilaginosus KNP414 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015436:440033*44003346023320201Spirochaeta coccoides DSM 17374 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg