Pre_GI: BLASTP Hits

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Query: NC_018080:5070687:5078764 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 5078764, End: 5079303, Length: 540

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015422:4822636:483340048334004833978579Alicycliphilus denitrificans K601 chromosome, complete genometype IV pilin structural subunit2e-27121
NC_015563:6357653:636608763660876366611525Delftia sp. Cs1-4 chromosome, complete genometype IV pilin structural subunit1e-25115
NC_010084:695817:720070720070720669600Burkholderia multivorans ATCC 17616 chromosome 1, completegeneral secretion pathway protein H3e-1477.8
NC_008740:2989856:300134130013413001850510Marinobacter aquaeolei VT8, complete genomeFimbrial protein pilin1e-1375.9
NC_011000:1023800:104696210469621047558597Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative type IV pilin protein2e-1375.5
NC_003902:3666544:367389136738913674331441Xanthomonas campestris pv. campestris str. ATCC 33913, completepilin1e-1168.9
NC_007086:1224867:127404712740471274487441Xanthomonas campestris pv. campestris str. 8004, complete genomepilin1e-1168.9
NC_007912:1111093:112108911210891121508420Saccharophagus degradans 2-40, complete genomePeptidase S49, protease IV2e-1168.9
NC_017267:3612682:361831136183113618736426Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completepilin2e-1168.6
NC_011992:3615517:362501936250193625609591Acidovorax ebreus TPSY, complete genomefgenesh4_pg.C_scaffold_28830000025e-1167.4
NC_006834:1602994:162396516239651624471507Xanthomonas oryzae pv. oryzae KACC10331, complete genomepilin6e-1167
NC_007705:1583373:160621716062171606642426Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomepilin7e-1166.6
NC_010717:1469911:148991414899141490339426Xanthomonas oryzae pv. oryzae PXO99A, complete genomepilin7e-1166.6
NC_011901:837085:860386860386860832447Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completepilin2e-1065.1
NC_010002:960027:970388970388970879492Delftia acidovorans SPH-1, complete genomepilin3e-1064.7
NC_007508:3835000:384048438404843840912429Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeTfp pilus assembly protein major pilin6e-1063.9
NC_011992:3615517:362355936235593624158600Acidovorax ebreus TPSY, complete genomefgenesh4_pg.C_scaffold_28830000021e-0963.2
NC_020829:1068438:107537410753741075835462Pseudomonas denitrificans ATCC 13867, complete genomeTfp pilus assembly protein major pilin PilA9e-1063.2
NC_020541:1014176:103127510312751031715441Rhodanobacter sp. 2APBS1, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein7e-0960.1
NC_018868:3943088:395314139531413953581441Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomefimbrial protein pilin1e-0859.3
NC_015677:3965716:397561839756183976127510Ramlibacter tataouinensis TTB310 chromosome, complete genometype 4 fimbrial PilA1e-0859.3
NC_015556:4074367:409119640911964091624429Pseudomonas fulva 12-X chromosome, complete genomeFimbrial protein pilin4e-0857.8
NC_008752:5213431:522344652234465223952507Acidovorax avenae subsp. citrulli AAC00-1, complete genomeTfp pilus assembly protein major pilin PilA2e-0755.5
NC_007908:1328832:135976413597641360246483Rhodoferax ferrireducens T118, complete genomemethylation2e-0755.5
NC_009256:2945059:296758429675842968042459Burkholderia vietnamiensis G4 chromosome 1, complete sequencefimbrial protein pilin3e-0754.7
NC_014924:725380:732490732490732912423Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeFimbrial protein pilin3e-0754.7
NC_007086:1224867:127456712745671275001435Xanthomonas campestris pv. campestris str. 8004, complete genomepilin6e-0753.9
NC_003902:3666544:367337736733773673811435Xanthomonas campestris pv. campestris str. ATCC 33913, completepilin6e-0753.9
NC_019902:27574:389703897039404435Thioalkalivibrio nitratireducens DSM 14787, complete genomeFimbrial protein precursor (Pilin)8e-0753.1
NC_009656:5297000:530881553088155309354540Pseudomonas aeruginosa PA7 chromosome, complete genometype IV pilin structural subunit2e-0651.6
NC_010688:1192410:124714812471481247561414Xanthomonas campestris pv. campestris, complete genomefimbrial protein precursor4e-0650.8
NC_019940:2546500:2547890254789025489121023Thioflavicoccus mobilis 8321 chromosome, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein1e-0549.7