Pre_GI: BLASTP Hits

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Query: NC_018080:5070687:5072898 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 5072898, End: 5073734, Length: 837

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020829:1068438:108546810854681086304837Pseudomonas denitrificans ATCC 13867, complete genomesignaling modulator of AmpD, AmpE3e-72271
NC_009439:860571:879289879289880122834Pseudomonas mendocina ymp, complete genomesignaling modulator of AmpD, AmpE2e-67255
NC_015410:969526:986891986891987724834Pseudomonas mendocina NK-01 chromosome, complete genomesignaling modulator of AmpD, AmpE2e-66252
NC_007912:1111093:113576911357691136614846Saccharophagus degradans 2-40, complete genomesignaling modulator of AmpD, AmpE1e-1067.4
NC_018868:3943088:396290439629043963776873Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomesignaling modulator of AmpD, AmpE3e-0859.3