Pre_GI: BLASTP Hits

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Query: NC_018080:4465618:4487949 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 4487949, End: 4488335, Length: 387

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011770:4763506:478673547867354787259525Pseudomonas aeruginosa LESB58, complete genomeHolliday junction resolvase RuvC7e-60228
NC_008463:4566976:459987945998794600403525Pseudomonas aeruginosa UCBPP-PA14, complete genomeHolliday junction resolvase RuvC7e-60228
NC_002516:1031386:105113210511321051656525Pseudomonas aeruginosa PAO1, complete genomeHolliday junction resolvase7e-60228
NC_004129:5481629:550243555024355502959525Pseudomonas fluorescens Pf-5, complete genomeHolliday junction resolvase1e-49194
NC_009483:1636189:165336916533691653884516Geobacter uraniireducens Rf4 chromosome, complete genomeHolliday junction resolvase3e-28124
NC_004757:230541:246771246771247316546Nitrosomonas europaea ATCC 19718, complete genomeCrossover junction endodeoxyribonuclease RuvC5e-26116
NC_015222:386000:402484402484403002519Nitrosomonas sp. AL212 chromosome, complete genomeCrossover junction endodeoxyribonuclease ruvC9e-26115
NC_013416:1783349:178334917833491783921573Aggregatibacter actinomycetemcomitans D11S-1, complete genomeHolliday junction resolvase1e-24112
NC_010513:1128000:114623611462361146781546Xylella fastidiosa M12 chromosome, complete genomeHolliday junction resolvase1e-24111
NC_004547:2810151:281015128101512810663513Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeHolliday junction resolvase2e-24111
NC_004556:1076063:109688510968851097406522Xylella fastidiosa Temecula1, complete genomeHolliday junction resolvase2e-24111
NC_010577:1087092:110667911066791107293615Xylella fastidiosa M23, complete genomecrossover junction endodeoxyribonuclease RuvC2e-24110
NC_013364:2355298:238753123875312388052522Escherichia coli O111:H- str. 11128, complete genomeendonuclease RuvC1e-23108
CU928160:1978500:201076420107642011285522Escherichia coli IAI1 chromosome, complete genomecomponent of RuvABC resolvasome, endonuclease1e-23108
AP010958:2134556:213604621360462136567522Escherichia coli O103:H2 str. 12009 DNA, complete genomeendonuclease RuvC1e-23108
NC_011741:1978500:201076420107642011285522Escherichia coli IAI1 chromosome, complete genomeHolliday junction resolvase1e-23108
NC_013353:2134556:213604621360462136567522Escherichia coli O103:H2 str. 12009, complete genomeendonuclease RuvC1e-23108
NC_013361:2591829:262406126240612624582522Escherichia coli O26:H11 str. 11368 chromosome, complete genomeHolliday junction resolvase1e-23108
NC_017505:1370128:139509413950941395630537Neisseria meningitidis alpha710 chromosome, complete genomecrossover junction endodeoxyribonuclease3e-23107
NC_017518:1449923:147332114733211473857537Neisseria meningitidis NZ-05/33 chromosome, complete genomecrossover junction endodeoxyribonuclease RuvC3e-22103
NC_017513:1331623:135899413589941359530537Neisseria meningitidis G2136 chromosome, complete genomecrossover junction endodeoxyribonuclease RuvC3e-22103
NC_013016:1289975:131080513108051311341537Neisseria meningitidis alpha14 chromosome, complete genomeHolliday junction resolvase2e-22103
NC_017512:1294970:131496413149641315500537Neisseria meningitidis WUE 2594, complete genomecrossover junction endodeoxyribonuclease RuvC (Holliday junction nuclease RuvC; Holliday junction resolvase RuvC)2e-22103
NC_008767:1321129:134388113438811344423543Neisseria meningitidis FAM18, complete genomecrossover junction endodeoxyribonuclease2e-22103
NC_003116:1518110:153792115379211538463543Neisseria meningitidis Z2491, complete genomeHolliday junction resolvase2e-22103
NC_003112:1423528:145465214546521455188537Neisseria meningitidis MC58, complete genomeHolliday junction resolvase2e-22103
NC_009454:1042592:105709410570941057588495Pelotomaculum thermopropionicum SI, complete genomeholliday junction resolvasome, endonuclease subunit2e-21100
NC_015731:402280:406448406448406981534Nitrosomonas sp. Is79A3 chromosome, complete genomeCrossover junction endodeoxyribonuclease ruvC4e-21100
NC_014315:114151:135695135695136219525Nitrosococcus watsoni C-113 chromosome, complete genomecrossover junction endodeoxyribonuclease RuvC1e-2098.2
NC_020054:2679676:269100126910012691594594Fibrella aestuarina BUZ 2 drat genomecrossover junction endodeoxyribonuclease RuvC6e-2095.9
NC_007484:130896:150942150942151466525Nitrosococcus oceani ATCC 19707, complete genomeCrossover junction endodeoxyribonuclease RuvC1e-1995.1
NC_007759:723675:747141747141747686546Syntrophus aciditrophicus SB, complete genomecrossover junction endodeoxyribonuclease4e-1993.2
NC_008786:3291700:329700432970043297552549Verminephrobacter eiseniae EF01-2, complete genomecrossover junction endodeoxyribonuclease RuvC1e-1892
NC_014774:1210004:121175312117531212259507Candidatus Liberibacter solanacearum CLso-ZC1 chromosome, completeHolliday junction resolvase2e-1891.3
NC_015408:404778:426151426151426657507Chlamydophila pecorum E58 chromosome, complete genomecrossover junction endodeoxyribonuclease RuvC1e-1788.2
NC_006833:902744:906111906111906599489Wolbachia endosymbiont strain TRS of Brugia malayi, completeHolliday junction resolvasome, endonuclease subunit, RuvC2e-1787.4
NC_015496:1590674:159167715916771592231555Krokinobacter diaphorus 4H-3-7-5 chromosome, complete genomecrossover junction endodeoxyribonuclease RuvC4e-1787
NC_013385:1617338:161895316189531619435483Ammonifex degensii KC4, complete genomecrossover junction endodeoxyribonuclease RuvC6e-1785.9
NC_015732:1507473:151487315148731515412540Spirochaeta caldaria DSM 7334 chromosome, complete genomeCrossover junction endodeoxyribonuclease ruvC2e-1684.3
NC_010741:546573:559336559336559926591Treponema pallidum subsp. pallidum SS14, complete genomeHolliday junction nuclease, subunit C4e-1683.2
NC_000919:545141:557904557904558494591Treponema pallidum subsp. pallidum str. Nichols, complete genomeHolliday junction nuclease (ruvC)4e-1683.2
NC_016842:546661:559424559424560014591Treponema pallidum subsp. pertenue str. SamoaD chromosome, completecrossover junction endoribonuclease subunit C4e-1683.2
NC_016843:547149:559912559912560502591Treponema pallidum subsp. pertenue str. Gauthier chromosome,crossover junction endoribonuclease subunit C4e-1683.2
NC_016844:547069:559832559832560422591Treponema pallidum subsp. pallidum DAL-1 chromosome, completecrossover junction endoribonuclease subunit C4e-1683.2
NC_016848:547115:559878559878560468591Treponema pallidum subsp. pertenue str. CDC2 chromosome, completecrossover junction endoribonuclease subunit C4e-1683.2
NC_017268:546376:559139559139559729591Treponema pallidum subsp. pallidum str. Chicago chromosome,crossover junction endodeoxyribonuclease RuvC4e-1683.2
NC_021508:546592:559355559355559945591Treponema pallidum subsp. pallidum SS14, complete genomecrossover junction endoribonuclease subunit C4e-1683.2
NC_015714:542679:555447555447556037591Treponema paraluiscuniculi Cuniculi A chromosome, complete genomecrossover junction endoribonuclease subunit C4e-1683.2
NC_014377:1335963:134022813402281340761534Thermosediminibacter oceani DSM 16646 chromosome, complete genomecrossover junction endodeoxyribonuclease RuvC1e-1582
NC_008783:145305:163151163151163654504Bartonella bacilliformis KC583, complete genomecrossover junction endodeoxyribonuclease RuvC2e-1580.9
NC_003454:822804:838758838758839330573Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeCrossover junction endodeoxyribonuclease ruvC5e-1579.7
NC_009523:5475812:548223054822305482736507Roseiflexus sp. RS-1 chromosome, complete genomeHolliday junction resolvase5e-1579.7
NC_015519:1205049:122627212262721226772501Tepidanaerobacter sp. Re1 chromosome, complete genomeCrossover junction endodeoxyribonuclease ruvC8e-1579
NC_012026:1135041:114994611499461150443498Anaplasma marginale str. Florida, complete genomeholliday (crossover) junction endodeoxyribonuclease (ruvC)3e-1477
NC_004842:1132441:114574211457421146239498Anaplasma marginale str. St. Maries, complete genomeholliday (crossover) junction endodeoxyribonuclease4e-1476.6
NC_013946:2050871:205087120508712051365495Meiothermus ruber DSM 1279 chromosome, complete genomecrossover junction endodeoxyribonuclease RuvC7e-1475.9
NC_013939:1688400:169216516921651692665501Deferribacter desulfuricans SSM1, complete genomecrossover junction endodeoxyribonuclease RuvC6e-1372.8
NC_013532:85371:974439744397931489Anaplasma centrale str. Israel, complete genomeHolliday (crossover) junction endodeoxyribonuclease7e-1372.4
NC_013174:1459730:146802214680221468594573Jonesia denitrificans DSM 20603, complete genomecrossover junction endodeoxyribonuclease RuvC1e-1065.5
NC_012526:2483000:249646724964672496976510Deinococcus deserti VCD115, complete genomeputative crossover junction endodeoxyribonuclease (Holliday junction resolvase)8e-0959.3
NC_005823:3487108:348710834871083487680573Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130putative holliday junction endodeoxyribonuclease protein7e-0959.3
NC_011896:563641:581233581233581799567Mycobacterium leprae Br4923, complete genomecrossover junction endodeoxyribonuclease7e-0959.3
NC_002677:563500:581224581224581790567Mycobacterium leprae TN, complete genomeHolliday junction resolvase7e-0959.3
NC_014958:66120:719907199072484495Deinococcus maricopensis DSM 21211 chromosome, complete genomeCrossover junction endodeoxyribonuclease ruvC7e-0959.3
NC_015161:2018493:203196820319682032504537Deinococcus proteolyticus MRP chromosome, complete genomeCrossover junction endodeoxyribonuclease ruvC1e-0858.5
NC_016782:1359000:136903713690371369576540Corynebacterium diphtheriae 241 chromosome, complete genomeholliday junction resolvase5e-0856.6
NC_016786:1359064:136900713690071369546540Corynebacterium diphtheriae HC01 chromosome, complete genomeholliday junction resolvase5e-0856.6
NC_016787:1350676:136211413621141362653540Corynebacterium diphtheriae HC03 chromosome, complete genomeholliday junction resolvase5e-0856.6
NC_016789:1334514:141271514127151413254540Corynebacterium diphtheriae PW8 chromosome, complete genomeholliday junction resolvase5e-0856.6
NC_016790:1319060:133818213381821338721540Corynebacterium diphtheriae VA01 chromosome, complete genomeholliday junction resolvase5e-0856.6
NC_016800:1378728:139549913954991396038540Corynebacterium diphtheriae BH8 chromosome, complete genomeholliday junction resolvase5e-0856.6
NC_016801:1361597:141203514120351412574540Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeholliday junction resolvase5e-0856.6
NC_002935:1378566:139469413946941395185492Corynebacterium diphtheriae NCTC 13129, complete genomeHolliday junction resolvase4e-0856.6
NC_008025:316302:323826323826324332507Deinococcus geothermalis DSM 11300, complete genomeCrossover junction endodeoxyribonuclease RuvC4e-0856.6
NC_006085:1234587:125907112590711259661591Propionibacterium acnes KPA171202, complete genomeHolliday junction resolvase1e-0755.5
NC_016783:1374464:139121513912151391754540Corynebacterium diphtheriae INCA 402 chromosome, complete genomeholliday junction resolvase1e-0755.1
NC_016785:1321700:134851813485181349057540Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeholliday junction resolvase1e-0755.1
NC_016788:1349500:136561713656171366156540Corynebacterium diphtheriae HC04 chromosome, complete genomeholliday junction resolvase1e-0755.1
NC_016799:1343020:142235814223581422897540Corynebacterium diphtheriae 31A chromosome, complete genomeholliday junction resolvase1e-0755.1
NC_016802:1317365:136782713678271368366540Corynebacterium diphtheriae HC02 chromosome, complete genomeholliday junction resolvase1e-0755.1
NC_016516:1203000:122565012256501226240591Propionibacterium acnes TypeIA2 P.acn33 chromosome, completeCrossover junction endodeoxyribonuclease RuvC8e-0752.4
NC_016512:1211653:123420412342041234794591Propionibacterium acnes TypeIA2 P.acn17 chromosome, completeCrossover junction endodeoxyribonuclease RuvC8e-0752.4
NC_014039:1238500:126118012611801261770591Propionibacterium acnes SK137 chromosome, complete genomeCrossover junction endodeoxyribonuclease RuvC8e-0752.4