Pre_GI: BLASTP Hits

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Query: NC_018080:4465618:4479173 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 4479173, End: 4479248, Length: 76

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002516:1031386:10603561060356106043176Pseudomonas aeruginosa PAO1, complete genometRNA-Lys1e-0652
NC_008463:4566976:45911064591106459117873Pseudomonas aeruginosa UCBPP-PA14, complete genometRNA-Lys5e-0650.1
NC_011770:4763506:47779624777962477803473Pseudomonas aeruginosa LESB58, complete genometRNA-Lys5e-0650.1
NC_005773:866157:87106387106387113876Pseudomonas syringae pv. phaseolicola 1448A, complete genometRNA-Lys7e-0649.3
NC_004578:895019:89897289897289904776Pseudomonas syringae pv. tomato str. DC3000, complete genometRNA-Lys7e-0649.3
NC_004578:4465247:44764344476434447650976Pseudomonas syringae pv. tomato str. DC3000, complete genometRNA-Lys7e-0649.3
NC_004129:5481629:54935115493511549358676Pseudomonas fluorescens Pf-5, complete genometRNA-Lys7e-0649.3
NC_009439:860571:86329186329186336676Pseudomonas mendocina ymp, complete genometRNA-Lys7e-0649.3
NC_015556:4074367:40989984098998409907376Pseudomonas fulva 12-X chromosome, complete genometRNA-Lys7e-0649.3
NC_007005:830467:83537283537283544776Pseudomonas syringae pv. syringae B728a, complete genometRNA-Lys7e-0649.3
NC_008027:4953432:49761584976158497623376Pseudomonas entomophila L48, complete genometRNA-Lys7e-0649.3