Pre_GI: BLASTP Hits

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Query: NC_018080:4465618:4474660 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 4474660, End: 4475259, Length: 600

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011770:4763506:477344847734484774047600Pseudomonas aeruginosa LESB58, complete genomefimbrial subunit CupC11e-64245
NC_008463:4566976:457601545760154576632618Pseudomonas aeruginosa UCBPP-PA14, complete genomefimbrial subunit CupC17e-49193
NC_002516:1031386:107328510732851073902618Pseudomonas aeruginosa PAO1, complete genomefimbrial subunit CupC16e-47186
NC_009656:4527457:453838045383804538991612Pseudomonas aeruginosa PA7 chromosome, complete genomefimbrial subunit CupC11e-27122
NC_010552:196457:201787201787202380594Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceFimbrial protein4e-27120