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Query: NC_018080:4436646:4461478 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 4461478, End: 4462476, Length: 999

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002516:1031386:108609710860971087095999Pseudomonas aeruginosa PAO1, complete genomeTranscriptional regulator5e-180630
NC_009092:1305355:132354813235481324423876Shewanella loihica PV-4, complete genometranscriptional regulator, LysR family4e-1479
NC_009831:4539952:455655145565514557429879Shewanella sediminis HAW-EB3, complete genomeconserved hypothetical transcriptional regulator2e-1170.1
NC_006841:1264555:128656712865671287454888Vibrio fischeri ES114 chromosome II, complete sequencetranscriptional regulators, LysR family2e-1066.6
NC_021066:460292:516210516210517100891Raoultella ornithinolytica B6, complete genomeLysR family transcriptional regulator2e-0963.5
NC_015663:4950000:496489549648954965776882Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative DNA-binding transcriptional regulator1e-0654.3
NC_014618:1752434:179011517901151791032918Enterobacter cloacae SCF1 chromosome, complete genomeLysR family transcriptional regulator1e-0551.2