Pre_GI: BLASTP Hits

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Query: NC_018080:4436646:4455507 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 4455507, End: 4456064, Length: 558

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:1645879:164749016474901648050561Pseudomonas fluorescens F113 chromosome, complete genomeprotein GcvR5e-71266
NC_012660:1579204:162053216205321621092561Pseudomonas fluorescens SBW25 chromosome, complete genomeputative regulatory protein2e-69261
NC_007005:1738500:174045517404551741018564Pseudomonas syringae pv. syringae B728a, complete genomeglycine cleavage system transcriptional repressor2e-67254
NC_010501:4379920:439795643979564398516561Pseudomonas putida W619, complete genomeglycine cleavage system transcriptional repressor8e-67252
NC_017986:4091051:409153640915364092096561Pseudomonas putida ND6 chromosome, complete genomeglycine cleavage system transcriptional repressor1e-66251
NC_018012:1274500:128677712867771287316540Thiocystis violascens DSM 198 chromosome, complete genomeglycine cleavage system regulatory protein5e-23107
NC_013889:413909:433267433267433821555Thioalkalivibrio sp. K90mix chromosome, complete genomeamino acid-binding ACT domain protein6e-1580.5
NC_016613:2596464:259881325988132599355543Vibrio sp. EJY3 chromosome 1, complete sequenceglycine cleavage system transcriptional repressor1e-0859.7
NC_014541:1414627:143521814352181435757540Ferrimonas balearica DSM 9799 chromosome, complete genomeglycine cleavage system transcriptional repressor, putative8e-0650.1