Pre_GI: BLASTP Hits

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Query: NC_018080:3448392:3469583 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 3469583, End: 3470059, Length: 477

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013385:1617338:162415716241571624852696Ammonifex degensii KC4, complete genomeMotA/TolQ/ExbB proton channel2e-1375.1
NC_008702:2892605:291225029122502912711462Azoarcus sp. BH72, complete genomeconserved hypothetical membrane protein8e-1269.7
NC_014658:816282:825606825606826259654Methanothermus fervidus DSM 2088 chromosome, complete genomehypothetical protein1e-1168.9
NC_009975:688667:692045692045692686642Methanococcus maripaludis C6, complete genomeMotA/TolQ/ExbB proton channel5e-1167
NC_013790:2617014:264046126404612641207747Methanobrevibacter ruminantium M1 chromosome, complete genomeMotA/TolQ/ExbB proton channel family protein7e-1063.2
NC_006347:3082921:309520430952043095806603Bacteroides fragilis YCH46, complete genomeintegral membrane protein6e-1063.2
NC_003228:3143470:315649531564953157097603Bacteroides fragilis NCTC 9343, complete genomehypothetical protein6e-1063.2
NC_016776:3181706:319398931939893194591603Bacteroides fragilis 638R, complete genomehypothetical protein6e-1063.2
NC_010424:697187:758869758869759549681Candidatus Desulforudis audaxviator MP104C, complete genomehypothetical protein3e-0960.8
NC_007681:1254566:125914012591401259784645Methanosphaera stadtmanae DSM 3091, complete genomeconserved hypothetical membrane-spanning protein4e-0960.5
NC_021184:823000:836947836947837636690Desulfotomaculum gibsoniae DSM 7213, complete genomebiopolymer transport protein1e-0755.5
NC_009515:1409912:142664914266491427290642Methanobrevibacter smithii ATCC 35061, complete genomebiopolymer transport protein3e-0754.3
NC_014328:2872721:287872128787212879422702Clostridium ljungdahlii ATCC 49587 chromosome, complete genomehypothetical protein2e-0651.2