Pre_GI: BLASTP Hits

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Query: NC_018080:1100047:1117956 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 1117956, End: 1119074, Length: 1119

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011770:1226923:1243383124338312445011119Pseudomonas aeruginosa LESB58, complete genomeputative permease0698
NC_002516:4285477:4285477428547742865951119Pseudomonas aeruginosa PAO1, complete genomehypothetical protein0698
NC_008463:1223012:1239195123919512403131119Pseudomonas aeruginosa UCBPP-PA14, complete genomeputative permease0698
NC_020829:4246847:4262040426204042631641125Pseudomonas denitrificans ATCC 13867, complete genomepermease5e-151534
NC_007963:3225306:3249254324925432504141161Chromohalobacter salexigens DSM 3043, complete genomepermease YjgP/YjgQ2e-64246
NC_013861:469500:4724954724954735741080Legionella longbeachae NSW150, complete genomePredicted membrane protein4e-59229
NC_017270:2500815:2515848251584825169481101Vibrio cholerae LMA3984-4 chromosome chromosome I, completepermease2e-46186
NC_008800:575141:5769325769325780261095Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein4e-37155
NC_009381:3680638:3703829370382937049231095Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-36153
NC_015136:813701:8263838263838274801098Burkholderia sp. CCGE1001 chromosome 1, complete sequencepermease YjgP/YjgQ family protein2e-36153
NC_003198:4676536:4678442467844246795421101Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative inner membrane protein8e-35148
NC_004631:4661000:4661331466133146624311101Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative inner membrane protein8e-35148
NC_020418:116500:1562401562401573431104Morganella morganii subsp. morganii KT, complete genomePutative permease2e-34147
NC_010498:4821519:4841167484116748422671101Escherichia coli SMS-3-5, complete genomeputative permease3e-34146
NC_010473:4564590:4586049458604945871491101Escherichia coli str. K-12 substr. DH10B, complete genomeconserved inner membrane protein3e-34146
AC_000091:4472000:4490898449089844919981101Escherichia coli W3110 DNA, complete genomeconserved inner membrane protein3e-34146
NC_007613:4217557:4233001423300142341011101Shigella boydii Sb227, complete genomehypothetical protein3e-34146
CU928160:4570498:4570498457049845715981101Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein; putative inner membrane protein3e-34146
NC_000913:4462782:4484241448424144853411101Escherichia coli K12, complete genomeconserved inner membrane protein3e-34146
NC_011741:4570498:4570498457049845715981101Escherichia coli IAI1 chromosome, complete genomehypothetical protein3e-34146
NC_011742:4795733:4815631481563148167311101Escherichia coli S88 chromosome, complete genomehypothetical protein3e-34146
NC_012967:4449576:4469445446944544705451101Escherichia coli B str. REL606 chromosome, complete genomeinner membrane protein3e-34146
NC_002977:2254440:2259421225942122604401020Methylococcus capsulatus str. Bath, complete genomehypothetical protein3e-34146
NC_016632:1695500:1704997170499717060911095Serratia symbiotica str. 'Cinara cedri' chromosome, completelipopolysaccharide export system permease protein1e-33144
NC_004547:442927:4635314635314646461116Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative permease2e-33143
NC_016832:4649432:4649432464943246505111080Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Lipopolysaccharide export system permease protein lptF2e-33143
NC_008258:4345400:4368861436886143698981038Shigella flexneri 5 str. 8401, complete genomehypothetical protein5e-33142
NC_020063:4127161:4147300414730041484001101Enterobacteriaceae bacterium strain FGI 57, complete genomeputative permease4e-33142
NC_020211:554736:5601005601005611941095Serratia marcescens WW4, complete genomelipopolysaccharide export ABC permease of the LptBFGC export complex8e-33141
NC_008309:555680:5596395596395607421104Haemophilus somnus 129PT, complete genomeconserved permease9e-33141
NC_009832:622969:6247616247616258551095Serratia proteamaculans 568, complete genomepermease YjgP/YjgQ family protein1e-32140
NC_007712:3629358:3649193364919336502931101Sodalis glossinidius str. 'morsitans', complete genomeputative transport protein4e-32139
NC_015061:4203767:4217072421707242181661095Rahnella sp. Y9602 chromosome, complete genomepermease YjgP/YjgQ family protein3e-32139
NC_017047:4298207:4311013431101343121071095Rahnella aquatilis HX2 chromosome, complete genomelipopolysaccharide ABC transporter permease LptF3e-32139
NC_013421:478586:4803794803794814911113Pectobacterium wasabiae WPP163, complete genomepermease YjgP/YjgQ family protein3e-32139
NC_015566:547387:5491805491805502741095Serratia sp. AS12 chromosome, complete genomepermease YjgP/YjgQ family protein1e-31137
NC_015567:547500:5493665493665504601095Serratia sp. AS9 chromosome, complete genomepermease YjgP/YjgQ family protein1e-31137
NC_009053:1257302:1274992127499212760231032Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein2e-31137
NC_010278:1235934:1237047123704712380511005Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,permease2e-31137
NC_012912:4194821:4206289420628942074011113Dickeya zeae Ech1591, complete genomepermease YjgP/YjgQ family protein7e-31135
NC_012913:280506:3025033025033036061104Aggregatibacter aphrophilus NJ8700, complete genome5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase6e-31135
NC_013592:446092:4478834478834490011119Dickeya dadantii Ech586, complete genomepermease YjgP/YjgQ family protein7e-31134
NC_013971:3296272:3331148333114833322481101Erwinia amylovora ATCC 49946 chromosome, complete genomepermease8e-31134
NC_012880:4117376:4127645412764541287451101Dickeya dadantii Ech703, complete genomepermease YjgP/YjgQ family protein3e-29129
NC_014500:443874:4491004491004502181119Dickeya dadantii 3937 chromosome, complete genomehypothetical protein6e-29128
NC_014306:4106569:4123570412357041246401071Erwinia billingiae Eb661, complete genomePutative permease6e-22105
NC_010002:3887926:3887926388792638890531128Delftia acidovorans SPH-1, complete genomepermease YjgP/YjgQ family protein4e-2099.4
NC_008825:2063990:2079391207939120804821092Methylibium petroleiphilum PM1, complete genomeputative transmembrane protein6e-2098.6
NC_020211:3535622:3540064354006435411341071Serratia marcescens WW4, complete genomeYjgP/YjgQ family permease3e-1789.7
NC_011979:1683964:1682798168279816839671170Geobacter sp. FRC-32, complete genomepermease YjgP/YjgQ family protein3e-0756.6
NC_010814:2758902:2775025277502527761641140Geobacter lovleyi SZ, complete genomepermease YjgP/YjgQ family protein2e-0654.3
NC_016803:465453:4795934795934807681176Desulfovibrio desulfuricans ND132 chromosome, complete genomeYjgP/YjgQ family permease9e-0651.6