Pre_GI: BLASTP Hits

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Query: NC_018000:2816637:2824665 Sinorhizobium fredii USDA 257 chromosome, complete genome

Start: 2824665, End: 2826344, Length: 1680

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016815:1085462:1101330110133011032371908Sinorhizobium fredii HH103 plasmid pSfHH103e complete sequenceputative sensor kinase protein5e-34146
NC_018000:3371829:3373842337384233756021761Sinorhizobium fredii USDA 257 chromosome, complete genomesensor kinase protein3e-33143
NC_014829:3305762:3306396330639633074361041Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase2e-1480.9
NC_006270:4149004:4149004414900441501461143Bacillus licheniformis ATCC 14580, complete genomeHypothetical ATP-binding region, ATPase-like1e-1275.1
NC_013552:1187299:1215292121529212163531062Dehalococcoides sp. VS, complete genomesensory box sensor histidine kinase2e-1274.3
NC_003295:199354:2122532122532136291377Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSMEMBRANE TWO COMPONENT SYSTEM SENSOR KINASE TRANSCRIPTION REGULATOR PROTEIN5e-1273.2
NC_007650:1192310:1195310119531011967011392Burkholderia thailandensis E264 chromosome II, complete sequencesensory box histidine kinase/response regulator4e-1273.2
NC_006322:4149500:414955741495574150261705Bacillus licheniformis ATCC 14580, complete genomeYvfT6e-1272.8
NC_020995:2255521:2256907225690722579741068Enterococcus casseliflavus EC20, complete genometwo-component system sensor histidine kinase9e-1272.4
NC_014960:1910202:1925461192546119270711611Anaerolinea thermophila UNI-1, complete genomeABC transporter ATP-binding protein2e-1171.2
NC_009328:448224:4936944936944947191026Geobacillus thermodenitrificans NG80-2 chromosome, complete genometwo-component sensor histidine kinase3e-1170.5
NC_007951:2904644:2906217290621729075961380Burkholderia xenovorans LB400 chromosome 1, complete sequencePeriplasmic sensor signal transduction Histidine Kinase3e-1170.5
NC_015690:3883243:3890848389084838926351788Paenibacillus mucilaginosus KNP414 chromosome, complete genomeTwo-component protein Kinase6e-1169.7
NC_016935:1306472:1315873131587313176601788Paenibacillus mucilaginosus 3016 chromosome, complete genomeTwo-component protein Kinase6e-1169.7
NC_004193:2921103:2934906293490629360481143Oceanobacillus iheyensis HTE831, complete genometwo-component sensor histidine kinase3e-1067
NC_015376:1752883:1753907175390717561322226Burkholderia gladioli BSR3 chromosome chromosome 2, completeMulti-sensor signal transduction histidine kinase6e-1066.2
NC_009767:5464796:5465677546567754677252049Roseiflexus castenholzii DSM 13941, complete genomeintegral membrane sensor signal transduction histidine kinase7e-1065.9
NC_010572:188500:2099672099672111511185Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative two-component system sensor kinase7e-1065.9
NC_015732:140087:1446471446471459841338Spirochaeta caldaria DSM 7334 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase9e-1065.9
NC_016935:1868839:1909331190933119105571227Paenibacillus mucilaginosus 3016 chromosome, complete genomehistidine kinase2e-0964.7
NC_007795:1922000:1973581197358119746241044Staphylococcus aureus subsp. aureus NCTC 8325, complete genomehistidine kinase, putative3e-0963.9
NC_014837:3126543:3147397314739731490821686Pantoea sp. At-9b chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase4e-0963.5
NC_012483:1567253:1573082157308215760452964Acidobacterium capsulatum ATCC 51196, complete genometwo-component system sensor protein, putative5e-0963.2
NC_013595:606096:6196566196566207741119Streptosporangium roseum DSM 43021, complete genomeputative two-component system sensor kinase5e-0963.2
NC_015761:2444833:2459617245961724613171701Salmonella bongori NCTC 12419, complete genomenitrate/nitrite sensor protein NarQ5e-0963.2
NC_014210:5752651:5758783575878357599311149Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,integral membrane sensor signal transduction histidine kinase7e-0962.8
NC_014147:765941:7705707705707725401971Moraxella catarrhalis RH4 chromosome, complete genometwo-component system nitrate/nitrite sensor histidine kinase NarX1e-0862
NC_014761:417377:4214104214104231041695Oceanithermus profundus DSM 14977 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase1e-0862
NC_016614:1152500:1168595116859511703461752Vibrio sp. EJY3 chromosome 2, complete sequencenitrate/nitrite sensor protein NarX1e-0862
NC_002570:832480:8489688489688501491182Bacillus halodurans C-125, complete genometwo-component sensor histidine kinase1e-0861.6
UCMB5137:174593:1989711989712007611791Bacillus atrophaeus UCMB-5137two-component hybrid sensor and regulator2e-0861.2
NC_004547:2285092:2306203230620323080111809Erwinia carotovora subsp. atroseptica SCRI1043, complete genomenitrate/nitrite sensor kinase2e-0861.2
NC_008148:1567703:1570582157058215718051224Rubrobacter xylanophilus DSM 9941, complete genomeperiplasmic sensor signal transduction histidine kinase2e-0861.2
NC_014394:2228470:2238632223863222426634032Gallionella capsiferriformans ES-2 chromosome, complete genomemulti-sensor signal transduction histidine kinase2e-0861.2
NC_016887:2269177:2293705229370522949041200Nocardia cyriacigeorgica GUH-2, complete genomeSensor kinase, two-component system (fragment)2e-0860.8
NC_010725:4035397:4074774407477440761921419Methylobacterium populi BJ001, complete genomeintegral membrane sensor signal transduction histidine kinase2e-0860.8
NC_002944:1881405:1903102190310219046401539Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein4e-0860.1
NC_016599:3616204:3632671363267136345481878Owenweeksia hongkongensis DSM 17368 chromosome, complete genomesignal transduction histidine kinase4e-0860.1
NC_015172:775128:8067178067178090592343Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeputative signal transduction histidine kinase4e-0860.1
NC_016114:3275004:3281501328150132829281428Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase5e-0859.7
NC_016935:7426389:7434146743414674359631818Paenibacillus mucilaginosus 3016 chromosome, complete genomeLuxR family two component transcriptional regulator5e-0859.7
NC_006177:520055:5342435342435361441902Symbiobacterium thermophilum IAM 14863, complete genometwo-component sensor histidine kinase7e-0859.3
NC_011886:1891077:1913122191312219147291608Arthrobacter chlorophenolicus A6, complete genomeGAF sensor signal transduction histidine kinase8e-0859.3
NC_007907:4692336:4711510471151047129581449Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0758.9
NC_012918:2277500:2284942228494222862071266Geobacter sp. M21 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase1e-0758.5
NC_016023:1419217:1432872143287214340171146Bacillus coagulans 36D1 chromosome, complete genomeputative signal transduction histidine kinase2e-0758.2
NC_012491:1293086:1322463132246313242711809Brevibacillus brevis NBRC 100599, complete genometwo-component hybrid sensor and regulator2e-0757.8
NC_012581:5085915:5085915508591550870451131Bacillus anthracis str. CDC 684 chromosome, complete genomesensor histidine kinase2e-0757.8
NC_014650:2417509:2432451243245124335571107Geobacillus sp. Y4.1MC1 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase3e-0757.4
NC_013959:1723037:1736003173600317372261224Sideroxydans lithotrophicus ES-1 chromosome, complete genomesignal transduction histidine kinase, nitrate/nitrite-specific, NarQ4e-0757
NC_012962:869295:8718958718958734391545Photorhabdus asymbiotica, complete genometwo-component sensor histidine kinase uhpb, phosphorylates uhpa3e-0757
NC_019897:329945:3635003635003646331134Thermobacillus composti KWC4 chromosome, complete genomesignal transduction histidine kinase4e-0756.6
NC_013207:19154:291672916729838672Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446histidine kinase5e-0756.6
NC_018750:1591895:1609088160908816102331146Streptomyces venezuelae ATCC 10712, complete genomeputative two-component system sensor kinase6e-0756.2
NC_009617:4436837:4437983443798344391371155Clostridium beijerinckii NCIMB 8052 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase6e-0756.2
NC_015856:4975815:4997349499734949987191371Collimonas fungivorans Ter331 chromosome, complete genomesensor histidine kinase7e-0756.2
NC_008025:1799106:1813191181319118148851695Deinococcus geothermalis DSM 11300, complete genomeperiplasmic sensor signal transduction histidine kinase9e-0755.8
NC_014622:4517709:4538343453834345401331791Paenibacillus polymyxa SC2 chromosome, complete genomeLuxR family transcriptional regulator9e-0755.8
NC_010162:7620000:7628585762858576297421158Sorangium cellulosum 'So ce 56', complete genomeputative two-component system sensor kinase8e-0755.8
NC_011772:5222917:5225308522530852264381131Bacillus cereus G9842, complete genomesensor histidine kinase8e-0755.8
NC_013406:3672857:3691084369108436928891806Paenibacillus sp. Y412MC10 chromosome, complete genomeLuxR family two component transcriptional regulator7e-0755.8
NC_009901:2787978:2787978278797827912593282Shewanella pealeana ATCC 700345, complete genomehistidine kinase1e-0655.1
NC_010571:2041277:2067947206794720691041158Opitutus terrae PB90-1, complete genomeintegral membrane sensor signal transduction histidine kinase2e-0654.7
NC_012491:6143928:6163238616323861650281791Brevibacillus brevis NBRC 100599, complete genometwo-component hybrid sensor and regulator2e-0654.7
NC_015065:18189:3935139351424523102Acidobacterium sp. MP5ACTX9 plasmid pACIX902, complete sequenceintegral membrane sensor signal transduction histidine kinase3e-0654.3
NC_019771:1356000:1365602136560213715925991Anabaena cylindrica PCC 7122, complete genomemulti-sensor signal transduction multi-kinase3e-0653.9
NC_016887:3255500:3257326325732632591371812Nocardia cyriacigeorgica GUH-2, complete genomeTwo-component system sensor kinase4e-0653.5
NC_016609:8251438:825755482575548258300747Niastella koreensis GR20-10 chromosome, complete genomeputative signal transduction histidine kinase4e-0653.5
NC_015379:2751342:2751342275134227525561215Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative histidine kinase, Classic4e-0653.5
NC_014034:1507047:1507743150774315090471305Rhodobacter capsulatus SB1003 chromosome, complete genomesignal transduction histidine kinase5e-0653.1
NC_013169:87269:1024511024511035691119Kytococcus sedentarius DSM 20547, complete genomesignal transduction histidine kinase6e-0653.1
NC_019897:4014485:4039610403961040407611152Thermobacillus composti KWC4 chromosome, complete genomehistidine kinase8e-0652.8
NC_018720:993869:1020155102015510215371383Bifidobacterium asteroides PRL2011 chromosome, complete genometwo-component system sensor kinase7e-0652.8
NC_013947:656140:6795396795396806811143Stackebrandtia nassauensis DSM 44728 chromosome, complete genomehistidine kinase7e-0652.8
NC_011146:2614500:2623115262311526243411227Geobacter bemidjiensis Bem, complete genomePAS/PAC sensor signal transduction histidine kinase7e-0652.8
NC_007778:3470661:3496354349635434987592406Rhodopseudomonas palustris HaA2, complete genomeputative signal transduction histidine kinase8e-0652.4
NC_009138:1843998:1880469188046918819051437Herminiimonas arsenicoxydans, complete genomehypothetical protein9e-0652.4
NC_015514:3911655:3936688393668839379621275Cellulomonas fimi ATCC 484 chromosome, complete genomeintegral membrane sensor signal transduction histidine kinase1e-0552.4