Pre_GI: BLASTP Hits

Some Help

Query: NC_018000:2054098:2063205 Sinorhizobium fredii USDA 257 chromosome, complete genome

Start: 2063205, End: 2064251, Length: 1047

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014100:172452:1724521724521738851434Caulobacter segnis ATCC 21756 chromosome, complete genomesignal transduction histidine kinase1e-52207
NC_010511:6067000:6123549612354961253091761Methylobacterium sp. 4-46 chromosome, complete genomesignal transduction histidine kinase2e-51202
NC_014217:16398:4007740077414051329Starkeya novella DSM 506 chromosome, complete genomesignal transduction histidine kinase2e-50199
NC_003902:3514000:3520554352055435215641011Xanthomonas campestris pv. campestris str. ATCC 33913, completetwo-component system sensor protein7e-46184
NC_010505:5525461:5557838555783855595531716Methylobacterium radiotolerans JCM 2831, complete genomesignal transduction histidine kinase2e-43176
NC_013859:61586:7556275562787053144Azospirillum sp. B510 plasmid pAB510e, complete sequencechemotaxis protein methyltransferase2e-42173
NC_015675:4493758:4506118450611845079111794Mesorhizobium opportunistum WSM2075 chromosome, complete genomesignal transduction histidine kinase4e-41169
NC_020453:1785473:1792687179268717938231137Agromonas oligotrophica S58 DNA, complete genomesignal transduction histidine kinase6e-39161
NC_017249:3181976:318709531870953187877783Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-36153
NC_011894:6516856:6541953654195365438601908Methylobacterium nodulans ORS 2060, complete genomesignal transduction histidine kinase2e-33143
NC_010511:6485500:6512616651261665136561041Methylobacterium sp. 4-46 chromosome, complete genomesignal transduction histidine kinase3e-33142
NC_007493:207932:224676224676225674999Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequencepossible sensor histidine protein kinase8e-33141
NC_011757:1288637:1288637128863712901391503Methylobacterium chloromethanicum CM4, complete genomesignal transduction histidine kinase1e-32140
NC_012988:1540587:1540587154058715421191533Methylobacterium extorquens DM4, complete genomeHWE family histidine kinase2e-32140
NC_007958:830000:8322168322168336671452Rhodopseudomonas palustris BisB5, complete genomeHWE histidine kinase3e-32139
NC_009668:1726000:1737290173729017383871098Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencesignal transduction histidine kinase4e-32139
NC_007722:851129:8610528610528621131062Erythrobacter litoralis HTCC2594, complete genomeputative chemotaxis methyltransferase protein1e-31137
NC_012988:769981:8298128298128317011890Methylobacterium extorquens DM4, complete genomeHWE family histidine kinase5e-31135
NC_010172:798923:8550408550408569141875Methylobacterium extorquens PA1, complete genomePAS sensor protein5e-31135
NC_010510:534024:5525225525225560133492Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeMCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor1e-30134
NC_017249:2073558:2084025208402520852211197Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-29129
NC_012846:1888000:1906184190618419071971014Bartonella grahamii as4aup, complete genomesensory transduction histidine kinase6e-29128
NC_010511:915313:9402709402709418081539Methylobacterium sp. 4-46 chromosome, complete genomesignal transduction histidine kinase7e-28124
NC_007493:628243:628243628243629184942Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceputative sensor histidine kinase1e-27124
NC_011757:5048714:5089351508935150912131863Methylobacterium chloromethanicum CM4, complete genomesignal transduction histidine kinase2e-27123
NC_010172:57500:1138591138591157211863Methylobacterium extorquens PA1, complete genomePAS sensor protein2e-27123
NC_005956:1572500:1591881159188115928941014Bartonella henselae str. Houston-1, complete genomeSensory transduction histidine kinase3e-27122
NC_020300:1344453:1362547136254713635601014Bartonella australis Aust/NH1, complete genomesensory transduction histidine kinase4e-27122
NC_014932:1232346:1304557130455713055581002Bartonella clarridgeiae 73, complete genometwo-component system sensor histidine kinase7e-27121
NC_008783:222000:2438842438842449121029Bartonella bacilliformis KC583, complete genomesensor histidine kinase1e-26120
NC_010511:6067000:6125902612590261270741173Methylobacterium sp. 4-46 chromosome, complete genomesignal transduction histidine kinase5e-26119
NC_020301:1486695:1507578150757815085911014Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomesensory transduction histidine kinase5e-26118
NC_010161:2050816:2071926207192620729391014Bartonella tribocorum CIP 105476, complete genometwo-component system sensor histidine kinase2e-25116
NC_010510:534024:550561550561551277717Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completesignal transduction histidine kinase3e-23109
NC_013859:61586:8057180571817881218Azospirillum sp. B510 plasmid pAB510e, complete sequencetwo-component sensor histidine kinase6e-23108
NC_004578:3241618:3258416325841632600201605Pseudomonas syringae pv. tomato str. DC3000, complete genomesensory box histidine kinase/response regulator2e-22107
NC_015138:3927411:3944062394406239456961635Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completePAS/PAC sensor hybrid histidine kinase3e-2099.8
NC_011757:5742290:5768649576864957713212673Methylobacterium chloromethanicum CM4, complete genomemulti-sensor hybrid histidine kinase4e-2099.4
NC_008752:3902637:3935879393587939375131635Acidovorax avenae subsp. citrulli AAC00-1, complete genomePAS/PAC sensor hybrid histidine kinase1e-1997.8
NC_010511:6067000:6143055614305561442241170Methylobacterium sp. 4-46 chromosome, complete genomesignal transduction histidine kinase1e-1997.4
NC_011004:4073916:410259141025914103547957Rhodopseudomonas palustris TIE-1, complete genomesignal transduction histidine kinase4e-1789
NC_017506:1:7315073150766383489Marinobacter adhaerens HP15 chromosome, complete genomesensory box/FOG: EAL domain/GGDEF domain containing protein5e-1479
NC_020388:252500:2908292908292928502022Natronomonas moolapensis 8.8.11 complete genomereceiver/sensor/bat box HTH-10 family transcription regulator Bat (homolog to bacterioopsin activator)5e-1479
NC_020388:578500:6071406071406088911752Natronomonas moolapensis 8.8.11 complete genomesensor box histidine kinase8e-1478.2
NC_014483:562594:5796755796755821522478Paenibacillus polymyxa E681 chromosome, complete genomeGAF domain containing protein3e-1376.3
NC_010505:400950:406576406576407553978Methylobacterium radiotolerans JCM 2831, complete genomeputative signal transduction histidine kinase5e-1375.5
NC_015850:217495:2418422418422445832742Acidithiobacillus caldus SM-1 chromosome, complete genomePAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase5e-1375.5
NC_011420:365505:3667203667203678261107Rhodospirillum centenum SW, complete genomesensory box histidine kinase, putative6e-1375.1
NC_008343:1250869:1258228125822812616743447Granulibacter bethesdensis CGDNIH1, complete genomechemotaxis protein methyltransferase2e-1273.6
NC_012030:345837:3493413493413511041764Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, completePAS/PAC sensor signal transduction histidine kinase2e-1273.2
NC_011894:6731115:6742313674231367445322220Methylobacterium nodulans ORS 2060, complete genomesignal transduction histidine kinase4e-1272.8
NC_018012:1274500:1293814129381412993365523Thiocystis violascens DSM 198 chromosome, complete genomePAS domain-containing protein5e-1168.9
NC_012526:131000:1341581341581355041347Deinococcus deserti VCD115, complete genomeputative response regulator, CheY, Guanylate cyclase, GGDEF domain with PAS/PAC sensor and Response Regulator Receiver modulation1e-1067.8
NC_016584:1998000:2018766201876620201871422Desulfosporosinus orientis DSM 765 chromosome, complete genomesignal transduction histidine kinase2e-1067.4
NC_009253:1381401:1383081138308113845591479Desulfotomaculum reducens MI-1 chromosome, complete genomesignal transduction histidine kinase2e-1067
NC_015064:2421034:2451253245125324527761524Acidobacterium sp. MP5ACTX9 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase2e-1066.6
NC_017506:4380196:4385544438554443872021659Marinobacter adhaerens HP15 chromosome, complete genomesensory box/GGDEF family protein3e-1066.6
NC_014394:2111985:2124229212422921270362808Gallionella capsiferriformans ES-2 chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)4e-1065.9
NC_012918:2758775:2758775275877527622153441Geobacter sp. M21 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase6e-1065.1
NC_015376:3320818:3348440334844033516373198Burkholderia gladioli BSR3 chromosome chromosome 2, completediguanylate cyclase/phosphodiesterase2e-0963.9
NC_016631:3434963:3441656344165634432151560Granulicella mallensis MP5ACTX8 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase3e-0963.2
NC_014623:5661108:5679531567953156822302700Stigmatella aurantiaca DW4/3-1 chromosome, complete genomesensor protein5e-0962.4
NC_007484:3358000:337858233785823379034453Nitrosococcus oceani ATCC 19707, complete genomePAS domain protein5e-0962.4
NC_014315:3207684:322887332288733229325453Nitrosococcus watsoni C-113 chromosome, complete genomeputative PAS/PAC sensor protein7e-0962
NC_006677:579975:5937085937085954861779Gluconobacter oxydans 621H, complete genomeDiguanylate cyclase9e-0961.6
NC_017075:4259460:4259460425946042621742715Rubrivivax gelatinosus IL144, complete genomePAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase8e-0961.6
NC_010084:2484000:2518152251815225209592808Burkholderia multivorans ATCC 17616 chromosome 1, completePAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase1e-0861.2
NC_010804:996837:1003814100381410063962583Burkholderia multivorans ATCC 17616 chromosome 1, completesignal transduction GGDEF/EAL domain protein1e-0861.2
NC_019940:929071:942588942588943055468Thioflavicoccus mobilis 8321 chromosome, complete genomePAS domain-containing protein1e-0860.8
NC_004193:375416:375416375416675301299886Oceanobacillus iheyensis HTE831, complete genome1e-0860.8
NC_012491:5914500:5934092593409259355521461Brevibacillus brevis NBRC 100599, complete genometwo-component sensor histidine kinase2e-0860.5
NC_016745:1548426:1548426154842615510742649Oceanimonas sp. GK1 chromosome, complete genomesensory box protein3e-0859.7
NC_007604:168176:1856821856821874181737Synechococcus elongatus PCC 7942, complete genomediguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)3e-0859.7
NC_014315:3207684:3219592321959232218682277Nitrosococcus watsoni C-113 chromosome, complete genomeputative PAS/PAC sensor protein3e-0859.7
NC_013194:4034854:403681940368194037250432Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeputative PAS/PAC sensor protein4e-0859.3
NC_010085:1174917:1188884118888411907401857Nitrosopumilus maritimus SCM1, complete genomePAS/PAC sensor signal transduction histidine kinase4e-0859.3
NC_004193:375416:616016616016616810795Oceanobacillus iheyensis HTE831, complete genomeprotein kinase5e-0858.9
NC_019897:3810000:3830137383013738319901854Thermobacillus composti KWC4 chromosome, complete genomePAS domain-containing protein8e-0858.2
NC_014394:2228470:2236100223610022378361737Gallionella capsiferriformans ES-2 chromosome, complete genomediguanylate cyclase with PAS/PAC sensor9e-0858.2
NC_007643:2722265:2748141274814127528234683Rhodospirillum rubrum ATCC 11170, complete genomeMulti-sensor Hybrid Histidine Kinase1e-0757.8
NC_007498:357484:3768073768073805263720Pelobacter carbinolicus DSM 2380, complete genometwo component sensor histidine kinase1e-0757.4
NC_014166:2149984:2171101217110121744753375Arcobacter nitrofigilis DSM 7299 chromosome, complete genomePAS/PAC sensor-containg diguanylate cyclase2e-0757.4
NC_012796:4693500:4714436471443647185634128Desulfovibrio magneticus RS-1, complete genometwo-component hybrid sensor and regulator2e-0757
NC_011979:3880488:3895400389540038988523453Geobacter sp. FRC-32, complete genomemulti-sensor signal transduction histidine kinase2e-0757
NC_014121:398012:4109994109994122461248Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completediguanylate cyclase with PAS/PAC sensor2e-0756.6
NC_007498:1562270:1569820156982015736443825Pelobacter carbinolicus DSM 2380, complete genomeEAL and GGDEF domain containing protein2e-0756.6
NC_011757:5742290:5744893574489357459391047Methylobacterium chloromethanicum CM4, complete genomesignal transduction histidine kinase3e-0756.2
NC_007519:3355768:3378588337858833813952808Desulfovibrio alaskensis G20 chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)3e-0756.2
NC_010322:5349000:5387471538747153891771707Pseudomonas putida GB-1 chromosome, complete genomePAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase4e-0756.2
NC_017986:1885613:1895555189555518972611707Pseudomonas putida ND6 chromosome, complete genomePAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase4e-0755.8
NC_015387:1278471:1285685128568512885522868Marinithermus hydrothermalis DSM 14884 chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)6e-0755.5
NC_015676:109743:1466261466261492982673Methanosalsum zhilinae DSM 4017 chromosome, complete genomesignal transduction histidine kinase6e-0755.5
NC_012988:1459961:1493218149321814944381221Methylobacterium extorquens DM4, complete genomesignal transduction histidine kinase8e-0755.1
NC_015499:1062359:1084573108457310867382166Thermodesulfobium narugense DSM 14796 chromosome, complete genomehypothetical protein1e-0654.7
NC_009439:4404942:4406940440694044106743735Pseudomonas mendocina ymp, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s)1e-0654.3
NC_003552:1492500:1510392151039215122421851Methanosarcina acetivorans C2A, complete genomesensory transduction histidine kinase1e-0654.3
NC_010995:948041:9877179877179905392823Cellvibrio japonicus Ueda107, complete genomeDiguanylate cyclase/phosphodiesterase domain 2 (EAL)1e-0654.3
NC_013960:452493:4651284651284671822055Nitrosococcus halophilus Nc4 chromosome, complete genomePAS sensor protein2e-0653.9
NC_015676:1417456:1432257143225714352683012Methanosalsum zhilinae DSM 4017 chromosome, complete genomesignal transduction histidine kinase2e-0653.9
NC_006576:217697:2299022299022326912790Synechococcus elongatus PCC 6301, complete genometwo-component response regulator1e-0653.9
NC_007604:1383192:1388109138810913908982790Synechococcus elongatus PCC 7942, complete genomeTwo-component response regulator1e-0653.9
NC_015216:405657:4241564241564258591704Methanobacterium sp. AL-21 chromosome, complete genomesignal transduction histidine kinase2e-0653.5
NC_013194:4964000:4983977498397749855361560Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completePAS/PAC sensor signal transduction histidine kinase2e-0653.5
NC_015703:3746057:3759132375913237608591728Runella slithyformis DSM 19594 chromosome, complete genomesignal transduction histidine kinase2e-0653.5
NC_015676:1663700:1665586166558616672441659Methanosalsum zhilinae DSM 4017 chromosome, complete genomesignal transduction histidine kinase3e-0653.1
NC_020389:2996978:3012499301249930151742676Methanosarcina mazei Tuc01, complete genomehypothetical protein3e-0653.1
NC_021150:4929670:4965534496553449671951662Azotobacter vinelandii CA6, complete genomecyclic di-GMP signal transduction protein3e-0653.1
NC_012560:4929683:4965547496554749672081662Azotobacter vinelandii DJ, complete genomecyclic di-GMP signal transduction protein3e-0653.1
NC_012559:978419:9957559957559973261572Laribacter hongkongensis HLHK9, complete genomeSensor protein3e-0653.1
NC_002678:4618555:4620483462048346215141032Mesorhizobium loti MAFF303099, complete genometwo-component sensor protein3e-0653.1
NC_015379:1151143:1155864115586411569491086Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative diguanylate cyclase3e-0653.1
NC_007484:3358000:3369303336930333715672265Nitrosococcus oceani ATCC 19707, complete genomePAS sensor, serine phosphatase RsbU regulator of sigma subunit3e-0652.8
NC_011146:2485625:2485625248562524894073783Geobacter bemidjiensis Bem, complete genomemulti-sensor hybrid histidine kinase4e-0652.8
NC_004557:2289135:2304838230483823062861449Clostridium tetani E88, complete genomeethanolamine utilization sensory transduction histidine kinase4e-0652.8
NC_015574:1970967:1987565198756519892231659Methanobacterium sp. SWAN-1 chromosome, complete genomesignal transduction histidine kinase5e-0652.4
NC_003366:1091766:1097054109705410984811428Clostridium perfringens str. 13, complete genometwo-component sensor histidine kinase5e-0652.4
NC_008261:1048515:1053806105380610552331428Clostridium perfringens ATCC 13124, complete genomesensor histidine kinase5e-0652.4
NC_014910:4207227:4224497422449742272622766Alicycliphilus denitrificans BC chromosome, complete genomediguanylate cyclase5e-0652.4
NC_014733:1223359:1254227125422712568362610Methylovorus sp. MP688 chromosome, complete genomediguanylate cyclase/phosphodiesterase with pas/pac sensor(s)4e-0652.4
NC_003901:3544712:3563665356366535662952631Methanosarcina mazei Go1, complete genomesensory transduction histidine kinase4e-0652.4
NC_017249:4365935:4384007438400743851761170Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein7e-0652
NC_015675:4526500:4532750453275045363103561Mesorhizobium opportunistum WSM2075 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase7e-0652
NC_017059:1972895:1983992198399219890345043Rhodospirillum photometricum DSM 122, complete genomeSensor protein7e-0652
NC_017080:2893224:2893224289322428955122289Phycisphaera mikurensis NBRC 102666, complete genomeputative two-component system sensor histidine kinase7e-0652
NC_012912:1229333:1238015123801512395321518Dickeya zeae Ech1591, complete genomediguanylate cyclase with PAS/PAC and GAF sensors6e-0652
NC_010725:3961981:3974007397400739752271221Methylobacterium populi BJ001, complete genomesignal transduction histidine kinase6e-0652
NC_019940:3089884:3104255310425531085444290Thioflavicoccus mobilis 8321 chromosome, complete genomePAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein6e-0652
NC_016631:4472987:449092144909214491559639Granulicella mallensis MP5ACTX8 chromosome, complete genomePAS sensor protein6e-0652
NC_007925:3911323:3923391392339139246081218Rhodopseudomonas palustris BisB18, complete genomesignal transduction histidine kinase8e-0651.6
NC_013959:826868:8672508672508700332784Sideroxydans lithotrophicus ES-1 chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)8e-0651.6
NC_012880:3241886:3247481324748132490011521Dickeya dadantii Ech703, complete genomediguanylate cyclase with PAS/PAC and GAF sensors9e-0651.6