Pre_GI: BLASTP Hits

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Query: NC_018000:1914945:1945154 Sinorhizobium fredii USDA 257 chromosome, complete genome

Start: 1945154, End: 1946248, Length: 1095

Host Lineage: Sinorhizobium fredii; Sinorhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This organism, much like other Rhizobia, forms a symbiotic relationship with a leguminous plant, such as soybean, cowpea or pigeon pea. Expression of nodulation genes results in production of a nodulation signal which the plant cell recognizes inducing root nodule formation. The plant cell provides carbon compounds for the bacterium to grow on.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007493:1672163:171741217174121718218807Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceABC spermidine/putrescine transporter, inner membrane subunit4e-28125
NC_008786:3681847:368813336881333688954822Verminephrobacter eiseniae EF01-2, complete genomebinding-protein-dependent transport systems inner membrane component9e-23108
NC_018000:1914945:1918008191800819197321725Sinorhizobium fredii USDA 257 chromosome, complete genomespermidine/putrescine transport system permease PotB2e-22107
NC_020134:1328302:134185513418551342634780Clostridium stercorarium subsp. stercorarium DSM 8532, completespermidine/putrescine transport system permease protein PotC6e-22105
NC_010677:707881:726609726609727415807Francisella tularensis subsp. mediasiatica FSC147, complete genomeATP-binding cassette putrescine uptake system, membrane protein, subunit I1e-20100
NC_021150:4929670:493368549336854934554870Azotobacter vinelandii CA6, complete genomepolyamine transport protein PotI2e-1997.1
NC_012560:4929683:493369849336984934567870Azotobacter vinelandii DJ, complete genomepolyamine transport protein PotI2e-1997.1
NC_008209:253663:270534270534271325792Roseobacter denitrificans OCh 114, complete genomespermidine-ABC transporter, permease component, putative2e-1996.7
NC_009922:2721343:274236027423602743142783Alkaliphilus oremlandii OhILAs, complete genomeOrnithine carbamoyltransferase3e-1996.3
NC_020911:349610:349610349610350422813Octadecabacter antarcticus 307, complete genomespermidine/putrescine ABC transporter permease protein9e-1994.7
NC_020211:2206500:220667922066792207461783Serratia marcescens WW4, complete genomespermidine/putrescine ABC transporter permease PotC2e-1893.6
NC_010483:1441614:146051714605171461287771Thermotoga sp. RQ2, complete genomeOrnithine carbamoyltransferase2e-1893.6
NC_013173:2305394:230459223045922305401810Desulfomicrobium baculatum DSM 4028, complete genomeOrnithine carbamoyltransferase8e-1891.7
NC_007650:84140:933929339294246855Burkholderia thailandensis E264 chromosome II, complete sequenceABC transporter, permease protein2e-1790.5
NC_007492:1193626:121120512112051212014810Pseudomonas fluorescens PfO-1, complete genomeBinding-protein-dependent transport systems inner membrane component2e-1790.1
NC_014640:5897421:591020759102075911058852Achromobacter xylosoxidans A8 chromosome, complete genomebinding-protein-dependent transporter inner membrane component family protein 623e-1789.7
NC_002505:1507860:152417515241751524945771Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completespermidine/putrescine ABC transporter membrane component6e-1789
NC_009457:1068000:108259110825911083361771Vibrio cholerae O395 chromosome 2, complete sequencespermidine/putrescine ABC transporter membrane protein6e-1789
NC_012578:1465302:148161714816171482387771Vibrio cholerae M66-2 chromosome I, complete sequencespermidine/putrescine ABC transporter membrane protein6e-1789
NC_012668:2115228:211912621191262119896771Vibrio cholerae MJ-1236 chromosome 1, complete sequencespermidine/putrescine ABC transporter membrane protein6e-1789
NC_016445:984856:100117010011701001940771Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completespermidine/putrescine ABC transporter membrane protein6e-1789
NC_016944:1504888:152120315212031521973771Vibrio cholerae IEC224 chromosome I, complete sequencespermidine/putrescine ABC transporter membrane protein6e-1789
NC_014299:218252:226629226629227456828Halalkalicoccus jeotgali B3 plasmid 2, complete sequencebinding-protein-dependent transport systems inner membrane component5e-1789
NC_013858:416000:450176450176450967792Azospirillum sp. B510 plasmid pAB510d, complete sequencespermidine/putrescine transport system permease protein6e-1788.6
NC_007435:1914375:192441619244161925270855Burkholderia pseudomallei 1710b chromosome II, complete sequencespermidine/putrescine ABC transporter, permease protein8e-1788.2
NC_007948:4646344:466299646629964663802807Polaromonas sp. JS666, complete genomebinding-protein-dependent transport systems inner membrane component1e-1687.4
NC_013716:1298932:130407713040771304868792Citrobacter rodentium ICC168, complete genomespermidine/putrescine ABC transporter, permease protein2e-1687.4
NC_015559:1478114:148337414833741484183810Marinomonas posidonica IVIA-Po-181 chromosome, complete genomeABC transporter integral membrane protein4e-1685.9
NC_016612:3361802:338253933825393383384846Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputrescine ABC transporter membrane protein5e-1685.9
NC_010498:1995500:202289020228902023684795Escherichia coli SMS-3-5, complete genomespermidine/putrescine ABC transporter, permease protein PotC6e-1685.5
NC_015276:2948923:295828829582882959097810Marinomonas mediterranea MMB-1 chromosome, complete genomeABC-type transporter, integral membrane subunit5e-1685.5
NC_008781:2981868:300050330005033001363861Polaromonas naphthalenivorans CJ2, complete genomebinding-protein-dependent transport systems inner membrane component5e-1685.5
NC_008314:477722:512112512112512933822Ralstonia eutropha H16 chromosome 2, complete sequenceABC-type transporter, permease component: POPT family1e-1584.7
NC_009831:1255995:126091512609151261742828Shewanella sediminis HAW-EB3, complete genomeOrnithine carbamoyltransferase1e-1584.7
NC_016048:1930089:195642919564291957307879Oscillibacter valericigenes Sjm18-20, complete genomespermidine/putrescine ABC transporter permease protein1e-1584.3
NC_019897:3810000:381215838121583812970813Thermobacillus composti KWC4 chromosome, complete genomespermidine/putrescine ABC transporter permease II1e-1584.3
NC_008391:1210451:121792312179231218762840Burkholderia cepacia AMMD chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component2e-1583.6
NC_020210:3341976:335289133528913353691801Geobacillus sp. GHH01, complete genomespermidine/putrescine ABC transporter permease3e-1583.2
NC_006351:73000:858178581786671855Burkholderia pseudomallei K96243 chromosome 2, complete sequenceABC transport system, membrane protein2e-1583.2
NC_007712:1516589:151869615186961519541846Sodalis glossinidius str. 'morsitans', complete genomeputrescine ABC transporter permease component4e-1582.8
NC_017095:166896:179306179306180076771Fervidobacterium pennivorans DSM 9078 chromosome, complete genomespermidine/putrescine ABC transporter permease II4e-1582.4
NC_009328:3322802:333370033337003334500801Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeABC transporter permease6e-1582
NC_008686:405159:439692439692440477786Paracoccus denitrificans PD1222 chromosome 1, complete sequencebinding-protein-dependent transport systems inner membrane component1e-1481.3
NC_013524:171524:181346181346182212867Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomebinding-protein-dependent transport systems inner membrane component1e-1481.3
NC_008312:4358134:437846443784644379327864Trichodesmium erythraeum IMS101, complete genomebinding-protein-dependent transport systems inner membrane component2e-1480.5
NC_002678:5714000:572656657265665727396831Mesorhizobium loti MAFF303099, complete genomeABC transporter, permease protein2e-1480.5
NC_017150:2290681:231591323159132316701789Acetobacter pasteurianus IFO 3283-01-42C, complete genometransporter permease5e-1479
NC_012914:469117:468317468317469120804Paenibacillus sp. JDR-2, complete genomebinding-protein-dependent transport systems inner membrane component6e-1479
NC_008309:1289370:130940313094031310170768Haemophilus somnus 129PT, complete genomespermidine/putrescine transport system, permease7e-1478.6
NC_010519:1802294:182374718237471824514768Haemophilus somnus 2336 chromosome, complete genomespermidine/putrescine ABC transporter membrane protein7e-1478.6
NC_017059:3404000:340743834074383408220783Rhodospirillum photometricum DSM 122, complete genomeABC-type spermidine/putrescine transport system1e-1377.8
NC_008391:2404443:241895124189512419745795Burkholderia cepacia AMMD chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component2e-1377
NC_011982:206784:228990228990229787798Agrobacterium vitis S4 plasmid pTiS4, complete sequenceABC transporter3e-1376.6
NC_016593:762216:767104767104767907804Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completespermidine/putrescine ABC transporter permease protein4e-1376.3
NC_014206:2941575:295680329568032957606804Geobacillus sp. C56-T3 chromosome, complete genomebinding-protein-dependent transporters inner membrane component4e-1376.3
NC_013524:969038:983292983292984143852Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomebinding-protein-dependent transport systems inner membrane component3e-1376.3
NC_014307:1765230:178621417862141787050837Ralstonia solanacearum CFBP2957 chromosome, complete genomespermidine/putrescine transporter permease (potc)3e-1376.3
NC_010676:2793237:282934628293462830158813Burkholderia phytofirmans PsJN chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component6e-1375.5
NC_009668:46010:479904799048805816Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component9e-1375.1
NC_016625:944925:962214962214963053840Burkholderia sp. YI23 chromosome 2, complete sequencebinding-protein-dependent transport system inner membrane protein1e-1273.9
NC_016633:3402242:342356034235603424417858Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomeABC-type spermidine/putrescine transport system, permease component II2e-1273.6
NC_002678:4885790:4914291491429149160691779Mesorhizobium loti MAFF303099, complete genomeABC transporter, permease3e-1273.2
NC_014217:2987450:300327530032753004093819Starkeya novella DSM 506 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component3e-1273.2
NC_003318:183914:206427206427207188762Brucella melitensis 16M chromosome II, complete sequenceSPERMIDINE/PUTRESCINE TRANSPORT SYSTEM PERMEASE PROTEIN POTC4e-1272.8
NC_006510:746814:751782751782752585804Geobacillus kaustophilus HTA426, complete genomespermidine/putrescine ABC transporter (permease)9e-1271.6
NC_020063:2343813:235953923595392360345807Enterobacteriaceae bacterium strain FGI 57, complete genomeABC-type spermidine/putrescine transport system, permease component II1e-1171.2
NC_008786:2175064:217868221786822179545864Verminephrobacter eiseniae EF01-2, complete genomebinding-protein-dependent transport systems inner membrane component1e-1171.2
NC_006510:2044347:205252420525242053318795Geobacillus kaustophilus HTA426, complete genomepolyamine ABC transporter (permease)2e-1170.5
NC_014483:5015890:501589050158905016678789Paenibacillus polymyxa E681 chromosome, complete genomeABC-type spermidine/putrescine transport system, permease component II8e-1168.6
NC_007929:111092:132262132262133098837Lactobacillus salivarius subsp. salivarius UCC118, complete genomeSpermidine/putrescine transport system permease protein1e-1068.2
NC_002678:5060670:5073350507335050751521803Mesorhizobium loti MAFF303099, complete genomeABC transporter permease protein1e-1067.4
NC_007434:2449721:246800924680092468803795Burkholderia pseudomallei 1710b chromosome I, complete sequencePutrescine transport system permease protein potI3e-1066.6
NC_011985:194973:210700210700211488789Agrobacterium radiobacter K84 chromosome 1, complete genomespermidine/putrescine ABC transporter2e-1066.6
NC_006350:1909639:191356119135611914355795Burkholderia pseudomallei K96243 chromosome 1, complete sequenceputative ABC transport system, permease protein2e-1066.6
NC_018643:857911:896024896024896878855Alpha proteobacterium HIMB5 chromosome, complete genomeBinding-protein-dependent transport system inner membrane component9e-1064.7
NC_020453:1025891:103581210358121036654843Agromonas oligotrophica S58 DNA, complete genomeAttB-like ABC transporter permease protein9e-1064.7
NC_007005:2686551:271080027108002711594795Pseudomonas syringae pv. syringae B728a, complete genomeBinding-protein-dependent transport systems inner membrane component3e-0963.2
NC_002162:138334:139328139328140182855Ureaplasma parvum serovar 3 str. ATCC 700970, complete genomespermidine/putrescine transport system permease5e-0962.4
NC_012691:2146473:214868621486862149522837Tolumonas auensis DSM 9187, complete genomebinding-protein-dependent transport systems inner membrane component9e-0961.6
NC_012491:648756:649595649595650395801Brevibacillus brevis NBRC 100599, complete genomeABC transporter permease protein1e-0861.2
NC_007948:4558000:4598283459828346000581776Polaromonas sp. JS666, complete genomebinding-protein-dependent transport systems inner membrane component1e-0860.8
NC_015591:1161007:1180170118017011820051836Sinorhizobium meliloti AK83 chromosome 3, complete sequenceABC transporter integral membrane protein3e-0859.7
NC_014166:2149984:216710021671002167924825Arcobacter nitrofigilis DSM 7299 chromosome, complete genomebinding-protein-dependent transporter inner membrane component4e-0859.3
NC_017249:8165826:818836881883688189084717Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-0858.9
NC_008054:1815723:182616918261691826957789Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completeSpermidine/putrescine ABC transporter, permease protein6e-0858.9
NC_004461:779000:791088791088791909822Staphylococcus epidermidis ATCC 12228, complete genomepotC protein1e-0758.2
NC_014217:3024961:302496130249613025788828Starkeya novella DSM 506 chromosome, complete genomebinding-protein-dependent transport systems inner membrane component1e-0757.8
NC_015381:1318818:131987013198701320853984Burkholderia gladioli BSR3 chromosome 1, complete sequenceBinding-protein-dependent transport systems inner membrane component2e-0757.4
NC_014299:218252:225763225763226632870Halalkalicoccus jeotgali B3 plasmid 2, complete sequencebinding-protein-dependent transport systems inner membrane component3e-0756.6
NC_006510:2044347:205331820533182054250933Geobacillus kaustophilus HTA426, complete genomeABC transporter (permease)3e-0756.2
NC_007948:4620661:461975146197514620668918Polaromonas sp. JS666, complete genomebinding-protein-dependent transport systems inner membrane component4e-0756.2
NC_008391:2404443:241974224197422420722981Burkholderia cepacia AMMD chromosome 2, complete sequencebinding-protein-dependent transport systems inner membrane component1e-0654.7
NC_011894:3820000:382239138223913823125735Methylobacterium nodulans ORS 2060, complete genomemolybdate ABC transporter, inner membrane subunit1e-0654.7
NC_011000:1216430:121838412183841219232849Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative ABC transporter membrane protein1e-0654.7
NC_020453:1025891:103493510349351035819885Agromonas oligotrophica S58 DNA, complete genomeABC transporter permease2e-0653.9
NC_008786:3681847:368894436889443689882939Verminephrobacter eiseniae EF01-2, complete genomebinding-protein-dependent transport systems inner membrane component6e-0652
NC_007492:1193626:121200412120041212939936Pseudomonas fluorescens PfO-1, complete genomeBinding-protein-dependent transport systems inner membrane component9e-0651.6
NC_009033:295517:317931317931318773843Staphylothermus marinus F1, complete genomebinding-protein-dependent transport systems inner membrane component9e-0651.6