Pre_GI: BLASTN Hits

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Query: NC_017986:4091051 Pseudomonas putida ND6 chromosome, complete genome

Start: 4091051, End: 4110793, Length: 19743

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013209:2032500*2032500205574623247Acetobacter pasteurianus IFO 3283-01, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013851:2729000*2729000275222523226Allochromatium vinosum DSM 180 chromosome, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_012724:31004303100430312207221643Burkholderia glumae BGR1 chromosome 1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010674:1*12076220762Clostridium botulinum B str. Eklund 17B, complete genome9e-0660BLASTN svgBLASTP svg
NC_012880:2871480*2871480289700125522Dickeya dadantii Ech703, complete genome9e-0660BLASTN svgBLASTP svg
NC_010125:3506955*3506955353159924645Gluconacetobacter diazotrophicus PAl 5, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_014935:15118351511835153500523171Nitratifractor saLSUginis DSM 16511 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012660:1579204*1579204162109241889Pseudomonas fluorescens SBW25 chromosome, complete genome2e-158567BLASTN svgBLASTP svg
NC_015410:3502099*3502099352815926061Pseudomonas mendocina NK-01 chromosome, complete genome1e-44188BLASTN svgBLASTP svg
NC_002947:34040003404000342808524086Pseudomonas putida KT2440, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_015733:1943385*1943385196159918215Pseudomonas putida S16 chromosome, complete genome01578BLASTN svgBLASTP svg
NC_010501:4379920*4379920440315523236Pseudomonas putida W619, complete genome06720BLASTN svgBLASTP svg
NC_007005:1738500*1738500176475226253Pseudomonas syringae pv. syringae B728a, complete genome0924BLASTN svgBLASTP svg
NC_004578:44329834432983445709924117Pseudomonas syringae pv. tomato str. DC3000, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013889:413909*41390943968925781Thioalkalivibrio sp. K90mix chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_011901:1122357*1122357114576023404Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete4e-1177.8BLASTN svgBLASTP svg
NC_008786:13320411332041135577823738Verminephrobacter eiseniae EF01-2, complete genome9e-0660BLASTN svgBLASTP svg