Pre_GI: BLASTP Hits

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Query: NC_017986:5833819:5844511 Pseudomonas putida ND6 chromosome, complete genome

Start: 5844511, End: 5846229, Length: 1719

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:3127240:3138806313880631406501845Pseudomonas aeruginosa PA7 chromosome, complete genomeintegrase catalytic subunit7e-88325
NC_008782:1277117:1296668129666812983381671Acidovorax sp. JS42, complete genomeIntegrase, catalytic region2e-63244
NC_010939:405477:4235454235454254731929Actinobacillus pleuropneumoniae serovar 7 str. AP76, completePutative transposase1e-61238
NC_016616:915755:9399229399229418231902Dechlorosoma suillum PS chromosome, complete genomeintegrase family protein1e-59231
NC_008543:90312:99641996411014401800Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceIntegrase, catalytic region5e-59229
NC_008061:2153495:2168333216833321701321800Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceIntegrase, catalytic region5e-59229
NC_007498:134442:1538771538771557541878Pelobacter carbinolicus DSM 2380, complete genomehypothetical protein1e-58228
NC_002678:5060670:5088718508871850903251608Mesorhizobium loti MAFF303099, complete genometransposase2e-58227
NC_012856:207194:2113422113422132341893Ralstonia pickettii 12D chromosome 1, complete genomeIntegrase catalytic region4e-55216
NC_020409:2222000:2225628222562822275471920Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeIntegrase catalytic region9e-55215
NC_017986:1885613:1888422188842218901011680Pseudomonas putida ND6 chromosome, complete genomeTniA2e-53211
NC_011761:2217632:2229241222924122311211881Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completetransposon transposition protein B2e-53211
NC_012440:1215838:1236077123607712379361860Persephonella marina EX-H1, complete genomeTniA transposase5e-53209
NC_014215:2259290:2281505228150522832051701Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,TniA protein9e-53208
NC_009348:1064664:1073012107301210748921881Aeromonas salmonicida subsp. salmonicida A449, complete genomeTniA transposase1e-52208
NC_009254:637952:6919556919556935831629Burkholderia vietnamiensis G4 chromosome 3, complete sequenceintegrase catalytic subunit5e-51202
NC_010120:1065833:1074745107474510762891545Neisseria meningitidis 053442, complete genomeconserved hypothetical protein9e-51201
NC_007575:1663088:1667067166706716689231857Sulfurimonas denitrificans DSM 1251, complete genomeintegrase catalytic subunit8e-51201
NC_017162:270460:2739922739922759021911Acinetobacter baumannii 1656-2 chromosome, complete genometransposase2e-50200
NC_013166:32474:3602436024378921869Kangiella koreensis DSM 16069, complete genomeTransposase-like Mu7e-50199
NC_009349:78000:8685886858885731716Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completeTniA protein9e-50198
NC_016860:4055117:4082776408277640844551680Salmonella enterica subsp. enterica serovar Typhimurium strputative transposase TniA7e-50198
NC_007912:231817:2359352359352377701836Saccharophagus degradans 2-40, complete genomeUrease, beta subunit1e-49197
NC_010410:3606826:3693499369349936954091911Acinetobacter baumannii AYE, complete genomeputative transposase1e-49197
NC_017387:247462:2474622474622493721911Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometransposition protein B3e-49196
NC_016616:2644883:2650240265024026519221683Dechlorosoma suillum PS chromosome, complete genomeMu transposase/integrase3e-49196
NC_019673:6394319:6402870640287064042431374Saccharothrix espanaensis DSM 44229 complete genomeputative integrase3e-48193
NC_013235:3913000:3930560393056039322241665Nakamurella multipartita DSM 44233, complete genomeIntegrase catalytic region6e-48192
NC_010682:3033646:3051516305151630534381923Ralstonia pickettii 12J chromosome 1, complete sequenceTniA transposase3e-47190
NC_010682:1763769:1768716176871617706381923Ralstonia pickettii 12J chromosome 1, complete sequenceTniA transposase3e-47190
NC_010682:1652636:1669589166958916715111923Ralstonia pickettii 12J chromosome 1, complete sequencehypothetical protein5e-47189
NC_014752:1063506:1072340107234010735271188Neisseria lactamica ST-640, complete genomeintegrase5e-47189
NC_007517:3430237:3435106343510634370161911Geobacter metallireducens GS-15, complete genometransposase4e-47189
NC_012856:2633890:2649928264992826518261899Ralstonia pickettii 12D chromosome 1, complete genomeTniA transposase4e-47189
NC_009349:78000:817558175510125019496Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete3e-46186
NC_003384:157158:1693331693331706191287Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmid1e-45184
NC_013365:92973:1039281039281051961269Escherichia coli O111:H- str. 11128 plasmid pO111_1, completeTniA protein1e-45184
NC_012988:2507142:2508022250802225096801659Methylobacterium extorquens DM4, complete genometransposase of ISMdi29, ISNCY family3e-43177
NC_015161:1748236:1755388175538817573311944Deinococcus proteolyticus MRP chromosome, complete genomehypothetical protein8e-43175
NC_014924:1701952:1709896170989617112961401Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeIntegrase catalytic region1e-41171
NC_014539:1:1839118391203521962Burkholderia sp. CCGE1003 chromosome 1, complete sequenceintegrase catalytic subunit1e-37158
NC_015572:1:4276342763446431881Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit1e-31138
NC_015572:1:1358813588155761989Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit4e-31136
NC_009659:3384997:3399629339962934014611833Janthinobacterium sp. Marseille chromosome, complete genometransposase4e-27123
NC_016616:2112211:2131716213171621343702655Dechlorosoma suillum PS chromosome, complete genomeMu transposase/integrase3e-26120
NC_007626:4135961:4135961413596141379221962Magnetospirillum magneticum AMB-1, complete genometransposase4e-26120
NC_007413:1405817:1407584140758414092661683Anabaena variabilis ATCC 29413, complete genomeIntegrase, catalytic region6e-26119
NC_008577:4611431:4638394463839446402471854Shewanella sp. ANA-3 chromosome 1, complete sequenceIntegrase, catalytic region1e-25118
NC_015146:144565:1445651445651459531389Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE301, completeMu transposase/integrase5e-25116
NC_012968:63898:7520175201771921992Methylotenera mobilis JLW8, complete genomeIntegrase catalytic region9e-25115
NC_012857:41946:4990849908526102703Ralstonia pickettii 12D chromosome 2, complete genomeIntegrase catalytic region1e-23111
NC_010678:900389:9083519083519110532703Ralstonia pickettii 12J chromosome 2, complete sequenceIntegrase catalytic region1e-23111
NC_015671:3093596:3101288310128831027181431Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase-like Mu3e-23110
NC_014366:3555425:3567950356795035698481899Gamma proteobacterium HdN1, complete genomeIntegrase, catalytic region8e-23108
NC_009956:88354:9555895558970511494Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequenceintegrase catalytic region2e-22107
NC_013893:1723939:1725148172514817265901443Staphylococcus lugdunensis HKU09-01 chromosome, complete genomeTn552 transposase6e-22106
NC_020050:1:1313613136155262391Cylindrospermum stagnale PCC 7417 plasmid pCYLST.01, partialTnsA endonuclease family protein,integrase family protein7e-21102
NC_010322:1:88288828107861959Pseudomonas putida GB-1 chromosome, complete genomeintegrase catalytic subunit9e-21102
NC_009512:1:80468046100041959Pseudomonas putida F1, complete genomeIntegrase, catalytic region9e-21102
NC_010501:1:80668066100241959Pseudomonas putida W619, complete genomeIntegrase catalytic region9e-21102
NC_002947:8394:1713317133191662034Pseudomonas putida KT2440, complete genometransposase, putative1e-20101
NC_010086:1816378:1860062186006218627702709Burkholderia multivorans ATCC 17616 chromosome 2, completeIntegrase catalytic region7e-2099.4
NC_009255:1105786:1160917116091711636252709Burkholderia vietnamiensis G4 chromosome 2, complete sequenceintegrase catalytic subunit7e-2099.4
NC_007509:3668:2569725697276461950Burkholderia sp. 383 chromosome 3, complete sequencehypothetical protein1e-1998.6
NC_011777:161505:1772771772771787221446Bacillus cereus AH820 plasmid pAH820_272, complete sequenceputative transposase2e-1998.2
NC_015942:2544407:2566316256631625683522037Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase catalytic subunit1e-1895.5
NC_004310:706238:7125517125517146652115Brucella suis 1330 chromosome I, complete sequencetransposase, putative2e-1894.7
NC_015857:731982:7393107393107414242115Brucella pinnipedialis B2/94 chromosome chromosome 1, completeintegrase catalytic subunit2e-1894.7
NC_006932:727943:7342567342567363702115Brucella abortus biovar 1 str. 9-941 chromosome I, completetransposase, hypothetical2e-1894.7
NC_007618:724238:7305517305517326652115Brucella melitensis biovar Abortus 2308 chromosome I, completeIntegrase, catalytic domain2e-1894.7
NC_017246:727143:7334897334897356032115Brucella melitensis M5-90 chromosome chromosome I, completeintegrase, catalytic domain -containing protein2e-1894.7
NC_017244:726893:7332397332397353532115Brucella melitensis M28 chromosome chromosome 1, complete sequenceintegrase catalytic domain-containing protein2e-1894.7
NC_010742:726146:7325737325737346872115Brucella abortus S19 chromosome 1, complete sequenceIntegrase, catalytic domain protein2e-1894.7
NC_013119:707804:7158337158337179472115Brucella microti CCM 4915 chromosome 1, complete sequencetransposase, putative2e-1894.7
NC_016778:329288:3403393403393424532115Brucella canis HSK A52141 chromosome 1, complete sequencetransposase2e-1894.7
NC_016795:1673464:1681716168171616838302115Brucella abortus A13334 chromosome 1, complete sequencetransposase2e-1894.7
NC_016797:706980:7124827124827145962115Brucella suis VBI22 chromosome I, complete sequencetransposase2e-1894.7
NC_017251:707000:7125377125377146512115Brucella suis 1330 chromosome I, complete genometransposase2e-1894.7
NC_012441:727500:7332317332317353452115Brucella melitensis ATCC 23457 chromosome I, complete sequenceintegrase catalytic domain-containing protein2e-1894.7
NC_017248:721764:7297577297577318712115Brucella melitensis NI chromosome chromosome I, complete sequenceIntegrase, catalytic domain protein2e-1894.7
NC_014550:3377834:3423654342365434251621509Arthrobacter arilaitensis Re117, complete genome2e-1894.4
NC_010103:704875:7112707112707130061737Brucella canis ATCC 23365 chromosome I, complete sequenceIntegrase, catalytic domain2e-1894.4
NC_003317:1263562:1271799127179912737601962Brucella melitensis 16M chromosome I, complete sequenceTRANSPOSASE2e-1894.4
NC_010169:725152:7314657314657335792115Brucella suis ATCC 23445 chromosome I, complete sequenceIntegrase, catalytic domain2e-1894.4
NC_015671:255808:2646962646962661051410Cellvibrio gilvus ATCC 13127 chromosome, complete genometransposase-like Mu4e-1893.2
NC_010002:1879220:1892059189205918940111953Delftia acidovorans SPH-1, complete genomehypothetical protein8e-1892.4
NC_012721:1986436:1998174199817419994301257Burkholderia glumae BGR1 chromosome 2, complete genome8e-1892.4
NC_016616:2997348:3024838302483830274982661Dechlorosoma suillum PS chromosome, complete genomeMu transposase/integrase1e-1792
NC_007520:407627:4259384259384278481911Thiomicrospira crunogena XCL-2, complete genomeIntegrase, catalytic region9e-1789
NC_009659:892272:9091379091379110831947Janthinobacterium sp. Marseille chromosome, complete genomehypothetical protein1e-1688.6
NC_012855:39751:6146561465634772013Ralstonia pickettii 12D plasmid pRp12D01, complete sequenceIntegrase catalytic region2e-1688.2
NC_011884:2397248:2404335240433524070882754Cyanothece sp. PCC 7425, complete genomeIntegrase catalytic region2e-1687.8
NC_019973:6102442:6121481612148161237392259Mesorhizobium australicum WSM2073, complete genomeintegrase family protein7e-1685.9
NC_017075:1837966:1851199185119918539372739Rubrivivax gelatinosus IL144, complete genomeintegrase catalytic subunit2e-1584.7
NC_012968:507988:5105355105355131772643Methylotenera mobilis JLW8, complete genomeIntegrase catalytic region3e-1584
NC_008209:761487:7708147708147729852172Roseobacter denitrificans OCh 114, complete genometransposase, putative2e-1481.3
NC_009256:176403:1834711834711864102940Burkholderia vietnamiensis G4 chromosome 1, complete sequenceintegrase catalytic subunit2e-1480.9
NC_010681:4299979:4326918432691843298002883Burkholderia phytofirmans PsJN chromosome 1, complete sequenceIntegrase catalytic region4e-1480.5
NC_008061:190287:2051762051762071641989Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceIntegrase, catalytic region5e-1480.1
NC_015740:4508375:4518273451827345203332061Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeintegrase core domain-containing protein6e-1479.7
NC_010515:2111691:2128434212843421301611728Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region5e-1479.7
NC_008686:405159:4264664264664285982133Paracoccus denitrificans PD1222 chromosome 1, complete sequenceIntegrase, catalytic region2e-1377.8
NC_008542:197500:2364472364472394793033Burkholderia cenocepacia HI2424 chromosome 1, complete sequenceIntegrase, catalytic region2e-1377.4
NC_008060:3155133:3187324318732431902542931Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceIntegrase, catalytic region3e-1377.4
NC_010995:4525119:4548733454873345508442112Cellvibrio japonicus Ueda107, complete genomeTn7-Cj, transposase protein TnsB2e-1274.7
NC_009050:212270:2620552620552644032349Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequenceIntegrase, catalytic region2e-1274.3
NC_015851:89006:1057801057801078552076Acidithiobacillus caldus SM-1 megaplasmid, complete sequencetransposon Tn7 transposition protein tnsB8e-1272.8
NC_008435:2658986:2667838266783826700002163Rhodopseudomonas palustris BisA53, complete genomeIntegrase, catalytic region8e-1272.4
NC_010501:2511887:2524038252403825259181881Pseudomonas putida W619, complete genomeIntegrase catalytic region9e-1272.4
NC_014307:2760347:2768927276892727708971971Ralstonia solanacearum CFBP2957 chromosome, complete genomehypothetical protein1e-1172
NC_014657:2127500:2136058213605821382202163Caldicellulosiruptor owensensis OL chromosome, complete genomeintegrase catalytic region1e-1171.6
NC_006512:2789098:2812068281206828141462079Idiomarina loihiensis L2TR, complete genomeTransposon Tn7 transposition protein tnsB2e-1171.6
NC_015958:2174731:2184442218444221866042163Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeintegrase catalytic subunit1e-1068.2
NC_008769:3070266:3070266307026630716751410Mycobacterium bovis BCG str. Pasteur 1173P2, complete genomeputative transposase2e-1067.8
NC_012207:3063039:3063039306303930644481410Mycobacterium bovis BCG str. Tokyo 172, complete genomeputative transposase2e-1067.8
NC_002755:3110929:3111536311153631129451410Mycobacterium tuberculosis CDC1551, complete genomeIS1604 transposase2e-1067.8
NC_009565:3128094:3128773312877331301821410Mycobacterium tuberculosis F11, complete genometransposase2e-1067.8
NC_012943:1279228:1295430129543012968391410Mycobacterium tuberculosis KZN 1435 chromosome, complete genometransposase2e-1067.8
NC_016768:1279178:1295374129537412967831410Mycobacterium tuberculosis KZN 4207 chromosome, complete genometransposase2e-1067.8
NC_016804:3049631:3049631304963130510401410Mycobacterium bovis BCG str. Mexico chromosome, complete genomeputative transposase2e-1067.8
NC_010572:8408500:8442223844222384443432121Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase2e-1067.8
NC_010572:82000:1015871015871037072121Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative transposase2e-1067.8
NC_009525:3128786:3128786312878631301951410Mycobacterium tuberculosis H37Ra, complete genomeputative transposase2e-1067.8
NC_000962:3116818:3116818311681831182271410Mycobacterium tuberculosis H37Rv, complete genomePROBABLE TRANSPOSASE2e-1067.8
NC_017026:3110155:3110654311065431120631410Mycobacterium tuberculosis RGTB327 chromosome, complete genometransposase2e-1067.8
NC_010571:637398:6493176493176521602844Opitutus terrae PB90-1, complete genomeIntegrase catalytic region4e-1066.6
NC_013921:1915377:1924090192409019262522163Thermoanaerobacter italicus Ab9 chromosome, complete genomeIntegrase catalytic region5e-1066.6
NC_002945:3073370:307398030739803074777798Mycobacterium bovis AF2122/97, complete genometransposase6e-1066.2
NC_015572:4916430:4936848493684849389292082Methylomonas methanica MC09 chromosome, complete genomeintegrase catalytic subunit2e-0964.7
NC_015859:1589707:1600802160080216025501749Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein3e-0964.3
NC_014394:1325616:1328977132897713311422166Gallionella capsiferriformans ES-2 chromosome, complete genomeIntegrase catalytic region3e-0964.3
NC_015635:2001539:2018354201835420197691416Microlunatus phosphovorus NM-1, complete genomeputative transposase6e-0963.2
NC_017904:2379387:242866524286652429405741Mycobacterium sp. MOTT36Y chromosome, complete genometransposase7e-0962.8
NC_015953:4045500:4052690405269040546932004Streptomyces sp. SirexAA-E chromosome, complete genomeintegrase catalytic subunit8e-0962.8
NC_007948:4646344:4675106467510646777362631Polaromonas sp. JS666, complete genomehypothetical protein9e-0962.4
NC_016907:152500:1607851607851627942010Gordonia polyisoprenivorans VH2 plasmid p174, complete sequenceputative transposase1e-0862.4
NC_010505:5035668:5061208506120850634722265Methylobacterium radiotolerans JCM 2831, complete genomeIntegrase catalytic region2e-0861.6
NC_012108:4118888:4135049413504941362571209Desulfobacterium autotrophicum HRM2, complete genometransposase/integrase family protein2e-0861.6
NC_011748:3983432:3998093399809340002162124Escherichia coli 55989, complete genomeTn7-like transposition protein TnsB2e-0861.2
CU928145:3983432:3998093399809340002162124Escherichia coli 55989 chromosome, complete genomeTn7-like transposition protein TnsB2e-0861.2
NC_009838:81913:1099931099931121162124Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequenceTnsB2e-0861.2
NC_017328:3935185:3955764395576439578722109Shigella flexneri 2002017 chromosome, complete genomeTransposon Tn7 transposition protein tnsB3e-0860.8
NC_007384:4095016:4101517410151741036252109Shigella sonnei Ss046, complete genomeputative transposase3e-0860.8
NC_010625:1602191:1614741161474116169272187Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencehypothetical protein3e-0860.5
NC_014121:5000069:5014584501458450166622079Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeTn7-like transposition protein TnsB4e-0860.5
NC_012587:2326000:2339902233990223423252424Rhizobium sp. NGR234, complete genomehypothetical protein4e-0860.1
NC_015733:5955467:5969934596993459721022169Pseudomonas putida S16 chromosome, complete genomeTn7-like transposition protein B6e-0859.7
NC_013235:4091185:4110159411015941116461488Nakamurella multipartita DSM 44233, complete genomeIntegrase catalytic region6e-0859.7
NC_008726:1776192:1793654179365417951531500Mycobacterium vanbaalenii PYR-1, complete genomeIntegrase, catalytic region1e-0758.9
NC_008726:610000:6108716108716123701500Mycobacterium vanbaalenii PYR-1, complete genomeIntegrase, catalytic region1e-0758.9
NC_009052:5089963:5100587510058751026592073Shewanella baltica OS155, complete genomeIntegrase, catalytic region1e-0758.5
NC_011992:2279752:228852622885262289167642Acidovorax ebreus TPSY, complete genome1e-0758.5
NC_015497:4564339:4570940457094045731082169Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genometransposon Tn7 transposition protein TnsB2e-0758.2
NC_004578:20738:3397833978359331956Pseudomonas syringae pv. tomato str. DC3000, complete genometransposase2e-0757.8
NC_014814:2588628:2590065259006525915251461Mycobacterium sp. Spyr1 chromosome, complete genomeMu transposase/integrase3e-0757.4
NC_014814:4235477:4257726425772642591861461Mycobacterium sp. Spyr1 chromosome, complete genomeMu transposase/integrase3e-0757.4
NC_018870:1417851:143474514347451435542798Thermacetogenium phaeum DSM 12270 chromosome, complete genomemu transposase, core domain family7e-0755.8
NC_015565:824448:8276558276558289021248Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeintegrase catalytic subunit3e-0653.9
NC_007503:2243902:2250848225084822520951248Carboxydothermus hydrogenoformans Z-2901, complete genomeISChy6, transposase3e-0653.9
NC_015565:2408669:2412382241238224136291248Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeintegrase catalytic subunit3e-0653.9
NC_011206:200000:2065542065542087402187Acidithiobacillus ferrooxidans ATCC 53993, complete genomeTn7-like transposition protein B4e-0653.5