Pre_GI: BLASTP Hits

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Query: NC_017986:5605197:5630305 Pseudomonas putida ND6 chromosome, complete genome

Start: 5630305, End: 5631078, Length: 774

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015589:2447132:244890124489012449674774Desulfotomaculum ruminis DSM 2154 chromosome, complete genometranscriptional regulator IclR7e-1167.8
NC_014392:2311243:231796223179622318795834Caldicellulosiruptor obsidiansis OB47 chromosome, complete genometranscriptional regulator, IclR family7e-1064.3
NC_014657:2236193:225991522599152260712798Caldicellulosiruptor owensensis OL chromosome, complete genometranscriptional regulator, iclr family1e-0963.5
NC_015949:428923:438325438325439119795Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeIclR family transcriptional regulator3e-0962.4
NC_015949:47414:557195571956513795Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeIclR family transcriptional regulator3e-0962.4
NC_014721:2043910:204995520499552050749795Caldicellulosiruptor kristjanssonii 177R1B chromosome, completetranscriptional regulator, iclr family9e-0960.8
NC_008593:640000:648290648290649051762Clostridium novyi NT, complete genometranscription regulator (IclR family) BH21379e-0960.8
NC_015573:813000:839785839785840549765Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeIclR family transcriptional regulator8e-0960.8
NC_015732:684000:686748686748687509762Spirochaeta caldaria DSM 7334 chromosome, complete genomeIclR family transcriptional regulator5e-0858.2
NC_003888:6853107:686865768686576869469813Streptomyces coelicolor A3(2), complete genometranscriptional regulator for glyoxylate bypass2e-0756.6
NC_010170:3944228:399148239914823992261780Bordetella petrii, complete genometranscriptional regulator, IclR family2e-0756.2
NC_019978:2532640:254798025479802548762783Halobacteroides halobius DSM 5150, complete genometranscriptional regulator2e-0755.8
NC_010718:1229355:122935512293551230158804Natranaerobius thermophilus JW/NM-WN-LF, complete genometranscriptional regulator, IclR family5e-0755.1
NC_016943:1560000:156831215683121569094783Blastococcus saxobsidens DD2, complete genomeIclR family transcriptional regulator7e-0754.7
NC_007951:1711223:171944717194471720283837Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, IclR family9e-0754.3
NC_016602:2037162:205856720585672059385819Vibrio furnissii NCTC 11218 chromosome 1, complete sequenceDNA-binding protein transcriptional activator1e-0653.9
NC_007644:416000:418409418409419215807Moorella thermoacetica ATCC 39073, complete genometranscriptional regulator, IclR family1e-0653.5
NC_007384:307013:325878325878326759882Shigella sonnei Ss046, complete genome2e-0652.8
NC_014121:677799:677799677799678557759Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completephage predicted DNA-binding transcriptional regulator2e-0652.8
NC_008148:792610:805439805439806221783Rubrobacter xylanophilus DSM 9941, complete genometranscriptional regulator, IclR family3e-0652.8
NC_011830:4645453:465649246564924657265774Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, IclR family3e-0652.4
NC_016514:506611:509638509638510396759Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YagI3e-0652.4
NC_011725:2949519:296142429614242962176753Bacillus cereus B4264 chromosome, complete genomeIclR family transcriptional regulator4e-0652
NC_010473:1384000:138625413862541387201948Escherichia coli str. K-12 substr. DH10B, complete genomeDNA-binding transcriptional activator, 3HPP-binding5e-0651.6
NC_013967:1967896:197330819733081974072765Haloferax volcanii DS2 chromosome, complete genomeArcR family transcription regulator5e-0651.6
AC_000091:273325:287628287628288386759Escherichia coli W3110 DNA, complete genomepredicted DNA-binding transcriptional regulator6e-0651.6
NC_000913:272071:287628287628288386759Escherichia coli K12, complete genomeCP4-6 prophage; predicted DNA-binding transcriptional regulator6e-0651.6
NC_006087:28490:625956259563383789Leifsonia xyli subsp. xyli str. CTCB07, complete genometranscriptional regulator, IclR family8e-0650.8