Pre_GI: BLASTN Hits

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Query: NC_017518:1843705 Neisseria meningitidis NZ-05/33 chromosome, complete genome

Start: 1843705, End: 1913919, Length: 70215

Host Lineage: Neisseria meningitidis; Neisseria; Neisseriaceae; Neisseriales; Proteobacteria; Bacteria

General Information: The second of two pathogenic Neisseria, this organism causes septicemia and is the leading cause of life-threatening meningitis (inflammation of the meninges, the membrane surrounding the brain and spinal cord) in children. This organism typically residies in the nasopharynx cavity but can invade the respiratory epthelial barrier, cross into the bloodstream and the blood brain barrier, and cause inflammation of the meninges. Pathogenicity factors include the surface proteins (porins and opacity proteins), and the type IV pilus (which is also found in Neisseria gonorrhoeae). This organism, like Neisseria gonorrhoeae, is naturally competent, and protein complexes at the cell surface recognize the uptake signal sequence in extracellular DNA, an 8mer that is found at high frequency in Neisseria chromosomal DNA.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003112:498465*49846553573337269Neisseria meningitidis MC58, complete genome015850BLASTN svgBLASTP svg
NC_010120:45277145277147660723837Neisseria meningitidis 053442, complete genome012360BLASTN svgBLASTP svg
NC_003116:65887965887968269623818Neisseria meningitidis Z2491, complete genome011600BLASTN svgBLASTP svg
NC_003112:18241961824196187366149466Neisseria meningitidis MC58, complete genome011210BLASTN svgBLASTP svg
NC_014752:93300093300096491831919Neisseria lactamica ST-640, complete genome07487BLASTN svgBLASTP svg
NC_008767:45198345198348189329911Neisseria meningitidis FAM18, complete genome06502BLASTN svgBLASTP svg
NC_014752:13916151391615142388832274Neisseria lactamica ST-640, complete genome05648BLASTN svgBLASTP svg
NC_002946:68472868472870809923372Neisseria gonorrhoeae FA 1090, complete genome04448BLASTN svgBLASTP svg
NC_008767:13632881363288138639123104Neisseria meningitidis FAM18, complete genome02133BLASTN svgBLASTP svg
NC_008767:2160000*2160000218237122372Neisseria meningitidis FAM18, complete genome02133BLASTN svgBLASTP svg
NC_003112:84400084400086636122362Neisseria meningitidis MC58, complete genome02119BLASTN svgBLASTP svg
NC_003116:75566675566677455118886Neisseria meningitidis Z2491, complete genome02109BLASTN svgBLASTP svg
NC_003112:16853301685330171029124962Neisseria meningitidis MC58, complete genome01719BLASTN svgBLASTP svg
NC_003112:15940001594000161392219923Neisseria meningitidis MC58, complete genome01582BLASTN svgBLASTP svg
NC_008767:1888950*1888950191066621717Neisseria meningitidis FAM18, complete genome01524BLASTN svgBLASTP svg
NC_010120:144000*14400016559921600Neisseria meningitidis 053442, complete genome01495BLASTN svgBLASTP svg
NC_008767:27375927375929740423646Neisseria meningitidis FAM18, complete genome01471BLASTN svgBLASTP svg
NC_003116:17340001734000175259918600Neisseria meningitidis Z2491, complete genome6e-170607BLASTN svgBLASTP svg
NC_008767:17393441739344175756118218Neisseria meningitidis FAM18, complete genome2e-167599BLASTN svgBLASTP svg
NC_014752:617987*61798763975421768Neisseria lactamica ST-640, complete genome1e-112416BLASTN svgBLASTP svg
NC_002946:1935186*1935186195867523490Neisseria gonorrhoeae FA 1090, complete genome8e-111410BLASTN svgBLASTP svg
NC_003112:14235281423528145518831661Neisseria meningitidis MC58, complete genome3e-76295BLASTN svgBLASTP svg
NC_008767:136958*13695816389726940Neisseria meningitidis FAM18, complete genome3e-67266BLASTN svgBLASTP svg
NC_008767:87790487790490209924196Neisseria meningitidis FAM18, complete genome3e-61246BLASTN svgBLASTP svg
NC_008767:84950*8495011280827859Neisseria meningitidis FAM18, complete genome4e-60242BLASTN svgBLASTP svg
NC_008767:1321129*1321129134743826310Neisseria meningitidis FAM18, complete genome2e-59240BLASTN svgBLASTP svg
NC_010120:13135001313500133123817739Neisseria meningitidis 053442, complete genome6e-59238BLASTN svgBLASTP svg
NC_003116:1518110*1518110154147823369Neisseria meningitidis Z2491, complete genome1e-50210BLASTN svgBLASTP svg
NC_014752:2087998*2087998211535127354Neisseria lactamica ST-640, complete genome1e-44190BLASTN svgBLASTP svg
NC_014752:83461683461687970445089Neisseria lactamica ST-640, complete genome6e-22115BLASTN svgBLASTP svg
NC_012472:21097192109719213459724879Bacillus cereus 03BB102, complete genome9e-0971.9BLASTN svgBLASTP svg
NC_008258:25428632542863256544822586Shigella flexneri 5 str. 8401, complete genome8e-0661.9BLASTN svgBLASTP svg
NC_004741:25264212526421254776721347Shigella flexneri 2a str. 2457T, complete genome8e-0661.9BLASTN svgBLASTP svg
NC_004337:25482882548288256963421347Shigella flexneri 2a str. 301, complete genome8e-0661.9BLASTN svgBLASTP svg