Pre_GI: BLASTN Hits

Some Help

Query: NC_017440:583392 Chlamydia trachomatis G/11074 chromosome, complete genome

Start: 583392, End: 604441, Length: 21050

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_000117:581987*58198760411522129Chlamydia trachomatis D/UW-3/CX, complete genome035120BLASTN svgBLASTP svg
NC_015744:900000*90000092218022181Chlamydia trachomatis L2c chromosome, complete genome034430BLASTN svgBLASTP svg
NC_010287:899945*89994592271122767Chlamydia trachomatis 434/Bu, complete genome034430BLASTN svgBLASTP svg
NC_010280:899974*89997492273922766Chlamydia trachomatis L2b/UCH-1/proctitis, complete genome034420BLASTN svgBLASTP svg
NC_007429:585774*58577460593520162Chlamydia trachomatis A/HAR-13, complete genome033380BLASTN svgBLASTP svg
NC_002620:936869*93686995636419496Chlamydia muridarum Nigg, complete genome013990BLASTN svgBLASTP svg
NC_015408:404778*40477843032125544Chlamydophila pecorum E58 chromosome, complete genome9e-74285BLASTN svgBLASTP svg
NC_014829:133305*13330517500741703Bacillus cellulosilyticus DSM 2522 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015185:174847*17484719343818592Desulfurobacterium thermolithotrophum DSM 11699 chromosome,4e-1177.8BLASTN svgBLASTP svg
NC_015713:2193610*2193610221614522536Simkania negevensis Z chromosome gsn.131, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015702:2505633*2505633252875923127Parachlamydia acanthamoebae UV7, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_005861:544280*54428056409919820Candidatus Protochlamydia amoebophila UWE25, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002528:546500*54650056448017981Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete1e-0869.9BLASTN svgBLASTP svg
NC_007205:1059684*1059684108783428151Candidatus Pelagibacter ubique HTCC1062, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011899:124500*12450014268218183Halothermothrix orenii H 168, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_013894:578271*57827160397425704Thermocrinis albus DSM 14484 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009802:1886000*1886000190809922100Campylobacter concisus 13826, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014921:688978*68897871809929122Mycoplasma fermentans M64 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_011999:198769*19876922025721489Macrococcus caseolyticus JCSC5402, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009662:222964*22296426489641933Nitratiruptor sp. SB155-2, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012225:2421783*2421783245309931317Brachyspira hyodysenteriae WA1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014410:403776*40377646022156446Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,2e-0661.9BLASTN svgBLASTP svg
NC_019970:336472*33647241533078859Thermoanaerobacterium thermosaccharolyticum M0795, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_019978:178277*17827721455436278Halobacteroides halobius DSM 5150, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015921:481532*48153250162120090Borrelia bissettii DN127 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_010842:2035146*2035146205599020845Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosome1e-0560BLASTN svgBLASTP svg
NC_010602:2029757*2029757205060120845Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'1e-0560BLASTN svgBLASTP svg