Query: NC_017434:581988 Chlamydia trachomatis D-EC chromosome, complete genome
Start: 581988, End: 604116, Length: 22129
Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria
General Information: Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_000117:581987* | 581987 | 604115 | 22129 | Chlamydia trachomatis D/UW-3/CX, complete genome | 0 | 35350 | BLASTN svg | BLASTP svg |
NC_015744:900000* | 900000 | 922180 | 22181 | Chlamydia trachomatis L2c chromosome, complete genome | 0 | 34430 | BLASTN svg | BLASTP svg |
NC_010287:899945* | 899945 | 922711 | 22767 | Chlamydia trachomatis 434/Bu, complete genome | 0 | 34430 | BLASTN svg | BLASTP svg |
NC_010280:899974* | 899974 | 922739 | 22766 | Chlamydia trachomatis L2b/UCH-1/proctitis, complete genome | 0 | 34410 | BLASTN svg | BLASTP svg |
NC_007429:585774* | 585774 | 605935 | 20162 | Chlamydia trachomatis A/HAR-13, complete genome | 0 | 33410 | BLASTN svg | BLASTP svg |
NC_002620:936869* | 936869 | 956364 | 19496 | Chlamydia muridarum Nigg, complete genome | 0 | 13960 | BLASTN svg | BLASTP svg |
NC_015408:404778* | 404778 | 430321 | 25544 | Chlamydophila pecorum E58 chromosome, complete genome | 1e-72 | 281 | BLASTN svg | BLASTP svg |
NC_015713:2193610* | 2193610 | 2216145 | 22536 | Simkania negevensis Z chromosome gsn.131, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_015185:174847* | 174847 | 193438 | 18592 | Desulfurobacterium thermolithotrophum DSM 11699 chromosome, | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_014829:133305* | 133305 | 175007 | 41703 | Bacillus cellulosilyticus DSM 2522 chromosome, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_002528:546500* | 546500 | 564480 | 17981 | Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_005861:544280* | 544280 | 564099 | 19820 | Candidatus Protochlamydia amoebophila UWE25, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_015702:2505633* | 2505633 | 2528759 | 23127 | Parachlamydia acanthamoebae UV7, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_011899:124500* | 124500 | 142682 | 18183 | Halothermothrix orenii H 168, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_007205:1059684* | 1059684 | 1087834 | 28151 | Candidatus Pelagibacter ubique HTCC1062, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_013894:578271* | 578271 | 603974 | 25704 | Thermocrinis albus DSM 14484 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009802:1886000* | 1886000 | 1908099 | 22100 | Campylobacter concisus 13826, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_011999:198769* | 198769 | 220257 | 21489 | Macrococcus caseolyticus JCSC5402, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_014921:688978* | 688978 | 718099 | 29122 | Mycoplasma fermentans M64 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_019978:178277* | 178277 | 214554 | 36278 | Halobacteroides halobius DSM 5150, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_019970:336472* | 336472 | 415330 | 78859 | Thermoanaerobacterium thermosaccharolyticum M0795, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014410:403776* | 403776 | 460221 | 56446 | Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome, | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_012225:2421783* | 2421783 | 2453099 | 31317 | Brachyspira hyodysenteriae WA1, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009662:222964* | 222964 | 264896 | 41933 | Nitratiruptor sp. SB155-2, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |