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Query: NC_017431:451551 Chlamydia trachomatis E/11023 chromosome, complete genome

Start: 451551, End: 474739, Length: 23189

Host Lineage: Chlamydia trachomatis; Chlamydia; Chlamydiaceae; Chlamydiales; Chlamydiae; Bacteria

General Information: Bacteria belonging to the Chlamydiales group are obligate intracellular parasites of eukaryotic cells. They are found within vertebrates, invertebrate cells, and amoebae hosts. Chlamydiae are one of the commonest causes of sexually transmitted diseases (STDs) and if left untreated may cause infertility in women. They are transmitted by direct contact or aerosols, and can cause various diseases, while also being able to coexist with the host in an apparently asymptomatic state. This species causes infection that leads to blindness and sexually transmitted diseases in humans. There are 15 serovariants that preferentially cause disease in either the eye or the urogenital tract. The trachoma (infection of the mucous membrane of the eyelids) biovars are noninvasive and can cause blinding trachoma (variants A, B, Ba, and C), or sexually transmitted diseases (variants, D, E, F, G, H, I, J, and K). The lymphogranuloma venereum biovars (variants L1, L2, and L3) can cross the epithelial cells of mucous membranes and then travel through the lymphatic system where they multiply within mononuclear phagocytes found within the lymph nodes.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010280:769639*76963979282723189Chlamydia trachomatis L2b/UCH-1/proctitis, complete genome019960BLASTN svgBLASTP svg
NC_015744:769907*76990779249722591Chlamydia trachomatis L2c chromosome, complete genome019940BLASTN svgBLASTP svg
NC_010287:769600*76960079278823189Chlamydia trachomatis 434/Bu, complete genome019940BLASTN svgBLASTP svg
NC_002620:803696*80369682802824333Chlamydia muridarum Nigg, complete genome02642BLASTN svgBLASTP svg
NC_002179:23785423785425915521302Chlamydophila pneumoniae AR39, complete genome4e-76293BLASTN svgBLASTP svg
NC_004552:23576923576925559119823Chlamydophila abortus S26/3, complete genome2e-41178BLASTN svgBLASTP svg
NC_002491:58580758580760559919793Chlamydophila pneumoniae J138, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010729:10149571014957103460619650Porphyromonas gingivalis ATCC 33277, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008593:1704207*1704207172452320317Clostridium novyi NT, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013454:229587*22958725413424548Blattabacterium sp. (Blattella germanica) str. Bge, complete2e-1075.8BLASTN svgBLASTP svg
NC_005303:780557*78055780913328577Onion yellows phytoplasma OY-M, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002950:12701321270132129604725916Porphyromonas gingivalis W83, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015571:12070001207000122958422585Porphyromonas gingivalis TDC60, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_003143:483395*48339550335019956Yersinia pestis CO92, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004088:41166764116676413528618611Yersinia pestis KIM, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_005810:42245004224500424264818149Yersinia pestis biovar Microtus str. 91001, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006155:713174*71317473201318840Yersinia pseudotuberculosis IP 32953, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008149:402599*40259942390621308Yersinia pestis Nepal516, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008150:4561633*4561633458159919967Yersinia pestis Antiqua, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010159:80966380966383240722745Yersinia pestis Angola, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010465:39587663958766397730818543Yersinia pseudotuberculosis YPIII, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006370:768745*76874579247423730Photobacterium profundum SS9 chromosome 1, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_018515:4148037*4148037416623318197Desulfosporosinus meridiei DSM 13257 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013123:78786*7878610552026735Candidatus Sulcia muelleri SMDSEM, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010611:31976*319765159919624Acinetobacter baumannii ACICU, complete genome3e-0661.9BLASTN svgBLASTP svg