Pre_GI: BLASTP Hits

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Query: NC_017379:1035464:1038164 Helicobacter pylori Puno135 chromosome, complete genome

Start: 1038164, End: 1038820, Length: 657

Host Lineage: Helicobacter pylori; Helicobacter; Helicobacteraceae; Campylobacterales; Proteobacteria; Bacteria

General Information: This genus consists of organisms that colonize the mucosal layer of the gastrointestinal tract or are found enterohepatically (in the liver). It was only recently discovered (1983) by two Australians (Warren and Marshall) that this organism was associated with peptic ulcers. It is one of the most common chronic infectious organisms, and is found in half the world's population. This organism attacks the gastric epithilial surface, resulting in chronic gastritis, and can cause more severe diseases including those that lead to gastric carcinomas and lymphomas, peptic ulcers, and severe diarrhea. It is an extracellular pathogen that persists in the gastric environment, which has a very low pH, by production of the urease enzyme, which converts urea to ammonia and carbon dioxide, a process which can counteract the acidic environment by production of a base. The toxins include cytolethal distending toxin, vacuolating cytotoxin (VacA) that induces host epithelial cell apopoptosis (cell death), and the cytotoxin associated antigen (CagA) which results in alteration to the host cell signalling pathways. The CagA protein is translocated into host cells by a type IV secretion system encoded by the cag pathogenicity island.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009350:137645:150244150244151139896Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, complete4e-1891.3
NC_017059:2957911:297497729749772975606630Rhodospirillum photometricum DSM 122, complete genomeATPase involved in chromosome partitioning,putative6e-0960.8
NC_008757:111292:122119122119122787669Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completeATPase involved in chromosome partitioning-like protein2e-1582.4
NC_012560:3667177:366717736671773667815639Azotobacter vinelandii DJ, complete genomeATPase, ParA type2e-1169.3
NC_021150:3667176:366717636671763667814639Azotobacter vinelandii CA6, complete genomeATPase, ParA type2e-1169.3
NC_005296:4574213:461630746163074616981675Rhodopseudomonas palustris CGA009, complete genomeATPase, ParA type4e-0754.7
NC_015382:266000:100100753654Burkholderia gladioli BSR3 plasmid bgla_1p, complete sequenceChromosome partition protein ParA1e-0653.1
NC_016835:128757:142563142563143189627Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,chromosome partitioning ATPase5e-0961.2
NC_016819:1:273927393374636Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq202,chromosome partitioning ATPase2e-1582.8
NC_011498:448000:470785470785471441657Helicobacter pylori P12, complete genomechromosome partitioning protein2e-113407
NC_019012:61360:676806768068285606Fibrella aestuarina BUZ 2 plasmid pFAES01, complete sequencechromosome partitioning protein1e-1066.2
NC_011989:594353:607855607855608529675Agrobacterium vitis S4 chromosome 1, complete sequencechromosome partitioning protein2e-0756.2
NC_017371:1030148:105018210501821050838657Helicobacter pylori Gambia94/24 chromosome, complete genomechromosome partitioning protein ParA1e-115415
NC_014555:1526775:155866315586631559319657Helicobacter pylori PeCan4 chromosome, complete genomechromosome partitioning protein ParA6e-115413
NC_009078:3087759:309454930945493095211663Burkholderia pseudomallei 1106a chromosome II, complete sequenceCobQ/CobB/MinD/ParA nucleotide-binding domain protein1e-0963.2
NC_009079:2339756:234600223460022346664663Burkholderia mallei NCTC 10247 chromosome I, complete sequenceCobQ/CobB/MinD/ParA nucleotide-binding domain protein1e-0963.2
NC_015381:2859000:289466928946692895307639Burkholderia gladioli BSR3 chromosome 1, complete sequencecobyrinic Acid a,c-diamide synthase2e-1168.9
NC_009254:23000:292242922429919696Burkholderia vietnamiensis G4 chromosome 3, complete sequencecobyrinic acid a,c-diamide synthase4e-0858.2
NC_008062:370902:377091377091377786696Burkholderia cenocepacia AU 1054 chromosome 3, complete sequenceCobyrinic acid a,c-diamide synthase2e-0755.8
NC_008538:46469:505885058851220633Arthrobacter sp. FB24 plasmid 2, complete sequenceCobyrinic acid a,c-diamide synthase6e-1994
NC_007643:1781723:179601217960121796650639Rhodospirillum rubrum ATCC 11170, complete genomeCobyrinic acid a,c-diamide synthase2e-1376.3
NC_016147:1961000:198868219886821989320639Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecobyrinic acid a,c-diamide synthase2e-1272.4
NC_008544:348500:354911354911355606696Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceCobyrinic acid a,c-diamide synthase2e-0755.8
NC_009439:3770282:379108337910833791721639Pseudomonas mendocina ymp, complete genomecobyrinic acid a,c-diamide synthase1e-1376.3
NC_008577:1455000:147866614786661479304639Shewanella sp. ANA-3 chromosome 1, complete sequenceCobyrinic acid a,c-diamide synthase6e-1167.4
NC_008392:542000:553230553230553925696Burkholderia cepacia AMMD chromosome 3, complete sequenceCobyrinic acid a,c-diamide synthase4e-0858.2
NC_008758:12000:341703417034868699Polaromonas naphthalenivorans CJ2 plasmid pPNAP02, completeCobyrinic acid a,c-diamide synthase4e-0651.6
NC_008752:725189:747663747663748301639Acidovorax avenae subsp. citrulli AAC00-1, complete genomeCobyrinic acid a,c-diamide synthase7e-1373.9
NC_008344:811386:830575830575831204630Nitrosomonas eutropha C91, complete genomeCobyrinic acid a,c-diamide synthase1e-0860.1
NC_007509:1383013:138986513898651390560696Burkholderia sp. 383 chromosome 3, complete sequenceCobyrinic acid a,c-diamide synthase3e-0858.5
NC_010815:40357:403574035741007651Geobacter lovleyi SZ plasmid pGLOV01, complete sequenceCobyrinic acid ac-diamide synthase1e-1790.1
NC_013958:29548:295482954830222675Nitrosococcus halophilus Nc4 plasmid pNHAL01, complete sequenceCobyrinic acid ac-diamide synthase3e-1582
NC_014840:205723:215231215231215851621Pantoea sp. At-9b plasmid pPAT9B03, complete sequenceCobyrinic acid ac-diamide synthase7e-1477.4
NC_010682:1593108:160025316002531600951699Ralstonia pickettii 12J chromosome 1, complete sequenceCobyrinic acid ac-diamide synthase3e-0858.5
NC_015556:2265940:228756922875692288207639Pseudomonas fulva 12-X chromosome, complete genomeCobyrinic acid ac-diamide synthase6e-1477.4
NC_010557:274945:283905283905284600696Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceCobyrinic acid ac-diamide synthase4e-0858.2
NC_015694:48344:103010301659630Runella slithyformis DSM 19594 plasmid pRUNSL03, complete sequenceCobyrinic acid ac-diamide synthase6e-1477.8
NC_014910:242845:264014264014264652639Alicycliphilus denitrificans BC chromosome, complete genomecobyrinic acid ac-diamide synthase1e-1273.2
NC_009720:622262:653829653829654482654Xanthobacter autotrophicus Py2, complete genomecobyrinic acid ac-diamide synthase3e-1272
NC_010322:4623867:466762346676234668270648Pseudomonas putida GB-1 chromosome, complete genomecobyrinic acid ac-diamide synthase3e-21101
NC_009720:4406991:444263144426314443284654Xanthobacter autotrophicus Py2, complete genomecobyrinic acid ac-diamide synthase6e-1167.8
NC_009668:445134:511677511677512330654Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencecobyrinic acid ac-diamide synthase5e-0961.2
NC_011365:1135750:116314511631451163975831Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeCobyrinic acid ac-diamide synthase5e-0857.8
NC_010512:734834:740950740950741645696Burkholderia cenocepacia MC0-3 chromosome 3, complete sequenceCobyrinic acid ac-diamide synthase2e-0755.8
NC_015221:12389:217952179522427633Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequencecobyrinic acid ac-diamide synthase2e-0652.8
NC_012752:1:106051060511243639Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum) plasmidconserved hypothetical protein HDEF_p00102e-1685.5
NC_017378:1518529:153698015369801537648669Helicobacter pylori Puno120 chromosome, complete genomehypothetical protein4e-77287
NC_017371:1470582:149017814901781490846669Helicobacter pylori Gambia94/24 chromosome, complete genomehypothetical protein6e-76283
NC_014560:1366747:139539413953941396062669Helicobacter pylori SJM180 chromosome, complete genomehypothetical protein5e-76283
NC_000921:1007519:103734310373431037885543Helicobacter pylori J99, complete genomehypothetical protein7e-62236
NC_005140:960261:966338966338966979642Vibrio vulnificus YJ016 chromosome II, complete sequencehypothetical protein7e-1890.9
NC_014256:485969:505645505645506313669Helicobacter pylori B8 chromosome, complete genomehypothetical protein5e-76283
NC_007941:11319:523135231352957645Escherichia coli UTI89 plasmid pUTI89, complete sequencehypothetical protein6e-1890.9
NC_013285:1:410441044700597Cronobacter turicensis plasmid pCTU3, complete sequencehypothetical protein2e-0962.4
NC_017372:748097:768038768038768688651Helicobacter pylori India7 chromosome, complete genomehypothetical protein3e-77287
NC_017063:834674:868078868078868746669Helicobacter pylori ELS37 chromosome, complete genomehypothetical protein5e-76283
NC_017362:1512959:153600315360031536671669Helicobacter pylori Lithuania75 chromosome, complete genomehypothetical protein3e-73274
NC_006349:2311817:231867423186742319336663Burkholderia mallei ATCC 23344 chromosome 2, complete sequenceParA family protein1e-0963.2
NC_007435:1825741:183284218328421833504663Burkholderia pseudomallei 1710b chromosome II, complete sequenceParA family protein1e-0963.2
NC_007650:2901751:290851329085132909175663Burkholderia thailandensis E264 chromosome II, complete sequenceParA family protein9e-1270.1
NC_012720:114489:100100789690Burkholderia glumae BGR1 plasmid bglu_3p, complete sequenceParA family protein4e-0754.7
NC_009075:3113393:312121131212113121873663Burkholderia pseudomallei 668 chromosome II, complete sequenceParA family protein1e-0963.2
NC_007275:1:577457746427654Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeParA family protein5e-0961.2
NC_015424:4251369:426797242679724268619648Aeromonas veronii B565 chromosome, complete genomeParA family protein1e-0859.7
NC_008835:1483237:148862414886241489286663Burkholderia mallei NCTC 10229 chromosome I, complete sequenceParA family protein1e-0963.2
NC_008784:1151305:115908611590861159748663Burkholderia mallei SAVP1 chromosome I, complete sequenceParA family protein1e-0963.2
NC_010698:870312:892053892053892709657Helicobacter pylori Shi470, complete genomePARA protein3e-112404
NC_017375:1498000:150444515044451504741297Helicobacter pylori 83 chromosome, complete genomePARA protein4e-40164
NC_000915:1044000:106268710626871063343657Helicobacter pylori 26695, complete genomePARA protein6e-113406
NC_017375:77142:899468994690623678Helicobacter pylori 83 chromosome, complete genomePARA protein3e-77287
NC_017367:278916:305477305477306133657Helicobacter pylori F57, complete genomePARA protein4e-114410
NC_017366:1055319:107175710717571072407651Helicobacter pylori F32, complete genomePARA protein3e-77287
NC_017375:1498000:150408615040861504448363Helicobacter pylori 83 chromosome, complete genomePARA protein4e-64244
NC_017361:930280:951974951974952630657Helicobacter pylori SouthAfrica7 chromosome, complete genomePARA protein3e-114410
NC_018939:1044000:106270510627051063361657Helicobacter pylori 26695 chromosome, complete genomePARA protein6e-113406
NC_011333:1040192:106684210668421067498657Helicobacter pylori G27 chromosome, complete genomePARA protein3e-115414
NC_017361:1528239:154924715492471549909663Helicobacter pylori SouthAfrica7 chromosome, complete genomePARA protein3e-114410
NC_017358:220900:248978248978249634657Helicobacter pylori Cuz20 chromosome, complete genomePARA protein4e-113407
NC_017249:18493:441224412244760639Bradyrhizobium japonicum USDA 6, complete genomepartition protein4e-0961.6
NC_015853:1:108241082411453630Acidithiobacillus caldus SM-1 plasmid pLAtc2, complete sequencepartition protein A2e-1065.9
NC_006351:3159630:316674431667443167406663Burkholderia pseudomallei K96243 chromosome 2, complete sequencepartition protein ParA1e-0963.2
NC_014506:157396:157396157396158049654Sulfurimonas autotrophica DSM 16294 chromosome, complete genomeplasmid partitioning protein1e-1170.1
NC_014305:97055:109690109690110310621Erwinia billingiae Eb661 plasmid pEB170, complete sequencePlasmid partitioning protein F1e-1376.6
NC_015674:1562968:156805815680581568225168Helicobacter bizzozeronii CIII-1, complete genomePlasmid partitioning protein ParA2e-0859.3
NC_015147:9761:243062430624938633Arthrobacter phenanthrenivorans Sphe3 plasmid pASPHE302, completeplasmid segregation oscillating ATPase ParF3e-1892
NC_018691:3041851:306362230636223064260639Alcanivorax dieselolei B5 chromosome, complete genomePlasmid segregation oscillating ATPase ParF2e-1169.3
NC_012732:1:6016011332732Rickettsia peacockii str. Rustic plasmid pRPR, complete sequenceplasmid stability protein ParA2e-1272.4
NC_007110:1:200402004020675636Rickettsia felis URRWXCal2 plasmid pRF, complete sequencePlasmid stability protein ParA8e-1580.5
NC_017376:57500:787557875579411657Helicobacter pylori SNT49 chromosome, complete genomeputative chromosome partitioning protein1e-114412
NC_014256:448710:470816470816471472657Helicobacter pylori B8 chromosome, complete genomeputative chromosome partitioning protein1e-114412
NC_010943:1332243:134940913494091350047639Stenotrophomonas maltophilia K279a, complete genomeputative ParA/CobQ/CobB/MinD nucleotide binding domain protein3e-1272
NC_003295:2787371:280827628082762808914639Ralstonia solanacearum GMI1000, complete genomePUTATIVE PARTITION PROTEIN7e-1373.9
NC_010170:4800000:482228048222804823236957Bordetella petrii, complete genomeputative partition protein2e-1066.2
NC_004463:18497:441304413044768639Bradyrhizobium japonicum USDA 110, complete genomeputative partition protein4e-0961.6
NC_009350:6987:194781947820107630Aeromonas salmonicida subsp. salmonicida A449 plasmid 5, completeputative partition protein2e-1995.5