Pre_GI: BLASTP Hits

Some Help

Query: NC_017354:1465925:1482687 Helicobacter pylori 52 chromosome, complete genome

Start: 1482687, End: 1483439, Length: 753

Host Lineage: Helicobacter pylori; Helicobacter; Helicobacteraceae; Campylobacterales; Proteobacteria; Bacteria

General Information: This genus consists of organisms that colonize the mucosal layer of the gastrointestinal tract or are found enterohepatically (in the liver). It was only recently discovered (1983) by two Australians (Warren and Marshall) that this organism was associated with peptic ulcers. It is one of the most common chronic infectious organisms, and is found in half the world's population. This organism attacks the gastric epithilial surface, resulting in chronic gastritis, and can cause more severe diseases including those that lead to gastric carcinomas and lymphomas, peptic ulcers, and severe diarrhea. It is an extracellular pathogen that persists in the gastric environment, which has a very low pH, by production of the urease enzyme, which converts urea to ammonia and carbon dioxide, a process which can counteract the acidic environment by production of a base. The toxins include cytolethal distending toxin, vacuolating cytotoxin (VacA) that induces host epithelial cell apopoptosis (cell death), and the cytotoxin associated antigen (CagA) which results in alteration to the host cell signalling pathways. The CagA protein is translocated into host cells by a type IV secretion system encoded by the cag pathogenicity island.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017365:1466500:148637514863751487127753Helicobacter pylori F30, complete genomeexodeoxyribonuclease2e-145514
NC_017367:1505780:152530515253051526057753Helicobacter pylori F57, complete genomeexodeoxyribonuclease3e-145514
NC_017378:1489818:151078615107861511538753Helicobacter pylori Puno120 chromosome, complete genomeexodeoxyribonuclease III3e-145514
NC_014555:1477934:149470014947001495452753Helicobacter pylori PeCan4 chromosome, complete genomeexodeoxyribonuclease III3e-145513
NC_018939:1583653:160504716050471605799753Helicobacter pylori 26695 chromosome, complete genomeexodeoxyribonuclease III5e-144509
NC_000915:1583967:160502416050241605776753Helicobacter pylori 26695, complete genomeexodeoxyribonuclease (lexA)5e-144509
NC_011498:1571840:159009615900961590848753Helicobacter pylori P12, complete genomeexodeoxyribonuclease3e-143507
NC_017371:1601452:162263216226321623384753Helicobacter pylori Gambia94/24 chromosome, complete genomeexodeoxyribonuclease III6e-143506
NC_003454:677699:684567684567685328762Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeExodeoxyribonuclease III1e-99362
NC_015958:2251619:225364922536492254422774Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeexodeoxyribonuclease III Xth1e-98359
NC_015437:767572:789421789421790173753Selenomonas sputigena ATCC 35185 chromosome, complete genomeexodeoxyribonuclease III8e-98356
NC_009922:2487492:248949824894982490256759Alkaliphilus oremlandii OhILAs, complete genomeexodeoxyribonuclease III Xth1e-97355
NC_016630:1890917:190549619054961906251756Filifactor alocis ATCC 35896 chromosome, complete genomeexodeoxyribonuclease III1e-96352
NC_015164:3144745:314738731473873148142756Bacteroides salanitronis DSM 18170 chromosome, complete genomeexodeoxyribonuclease III Xth1e-94346
NC_014019:2661000:267609026760902676851762Bacillus megaterium QM B1551 chromosome, complete genomeexodeoxyribonuclease III4e-90331
NC_014103:2635695:265549526554952656256762Bacillus megaterium DSM319 chromosome, complete genomeexodeoxyribonuclease III2e-89328
NC_017191:3901914:392027239202723921030759Bacillus amyloliquefaciens XH7 chromosome, complete genome5'3'-exonuclease4e-88324
NC_017188:3900951:391858039185803919338759Bacillus amyloliquefaciens TA208 chromosome, complete genomeapurinic/apyrimidinic endonuclease4e-88324
NC_020244:4020315:404357340435734044331759Bacillus subtilis XF-1, complete genomeapurinic/apyrimidinic endonuclease2e-87322
NC_019842:3921424:394240039424003943158759Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,ExoA protein1e-87322
UCMB5137:3660165:368662836866283687386759Bacillus atrophaeus UCMB-5137exodeoxyribonuclease III6e-87320
NC_020410:3868573:389133438913343892092759Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeapurinic/apyrimidinic endonuclease8e-87320
NC_009725:3878862:389963238996323900390759Bacillus amyloliquefaciens FZB42, complete genomeExoA1e-86319
NC_004193:375416:545279545279546088810Oceanobacillus iheyensis HTE831, complete genomeexodeoxyribonuclease8e-84310
NC_013205:2332174:233217423321742332932759Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,exodeoxyribonuclease III Xth2e-80298
NC_015152:1230995:125228512522851253037753Spirochaeta sp. Buddy chromosome, complete genomeexodeoxyribonuclease III Xth4e-78291
NC_014363:114239:114239114239115030792Olsenella uli DSM 7084 chromosome, complete genomeexodeoxyribonuclease III Xth5e-78290
NC_015389:2030154:202931620293162030167852Coriobacterium glomerans PW2 chromosome, complete genomeexodeoxyribonuclease III Xth7e-73273
NC_002689:46243:474644746448222759Thermoplasma volcanium GSS1, complete genomeExonuclease III1e-57223
NC_019791:99793:113871113871114608738Caldisphaera lagunensis DSM 15908 chromosome, complete genomeexodeoxyribonuclease III5e-56218
NC_008255:4043045:404553440455344046298765Cytophaga hutchinsonii ATCC 33406, complete genomeexodeoxyribonuclease III1e-54213
NC_017276:85380:882298822988972744Sulfolobus islandicus REY15A chromosome, complete genomeexodeoxyribonuclease III Xth4e-54211
NC_013769:87582:883878838789130744Sulfolobus islandicus L.D.8.5 chromosome, complete genomeexodeoxyribonuclease III Xth4e-54211
NC_012589:87592:883828838289125744Sulfolobus islandicus L.S.2.15, complete genomeexodeoxyribonuclease III Xth4e-54211
NC_012632:87590:883808838089123744Sulfolobus islandicus M.16.27 chromosome, complete genomeexodeoxyribonuclease III Xth5e-54211
NC_012588:87592:883828838289125744Sulfolobus islandicus M.14.25 chromosome, complete genomeexodeoxyribonuclease III Xth5e-54211
NC_015558:1425271:145195214519521452779828Streptococcus parauberis KCTC 11537 chromosome, complete genomeputative 3'-exo-deoxyribonuclease4e-50198
NC_014655:2874640:289134628913462892110765Leadbetterella byssophila DSM 17132 chromosome, complete genomeexodeoxyribonuclease iii xth3e-50198
NC_018748:1916012:193214919321491932910762Emticicia oligotrophica DSM 17448 chromosome, complete genomeexodeoxyribonuclease III Xth4e-50197
NC_010080:69000:693866938670213828Lactobacillus helveticus DPC 4571, complete genomeExodeoxyribonuclease A4e-49194
NC_017514:96911:114661114661115440780Neisseria meningitidis M01-240149 chromosome, complete genomeexodeoxyribonuclease III5e-49194
NC_018528:65000:652966529666123828Lactobacillus helveticus R0052 chromosome, complete genomeExodeoxyribonuclease A2e-48192
NC_015214:48999:489994899949826828Lactobacillus acidophilus 30SC chromosome, complete genomeExodeoxyribonuclease III5e-47187
NC_006814:51500:516875168752523837Lactobacillus acidophilus NCFM, complete genomeexodeoxyribonuclease A4e-47187
NC_015602:1810500:181090618109061811733828Lactobacillus kefiranofaciens ZW3 chromosome, complete genomeexodeoxyribonuclease III1e-46186
NC_002942:675829:696023696023696805783Legionella pneumophila subsp. pneumophila str. Philadelphia 1,exodeoxyribonuclease III1e-44180
NC_006369:734080:764146764146764928783Legionella pneumophila str. Lens, complete genomehypothetical protein1e-44179
NC_006368:750356:778490778490779272783Legionella pneumophila str. Paris, complete genomehypothetical protein1e-44179
NC_009494:775676:801482801482802264783Legionella pneumophila str. Corby chromosome, complete genomeexodeoxyribonuclease III1e-44179
NC_014125:766576:787521787521788303783Legionella pneumophila 2300/99 Alcoy chromosome, complete genomeexodeoxyribonuclease III1e-44179
NC_009712:334143:340785340785341594810Candidatus Methanoregula boonei 6A8, complete genomeexodeoxyribonuclease III Xth6e-41167
NC_003106:1899691:191310119131011913826726Sulfolobus tokodaii str. 7, complete genomehypothetical exodeoxyribonuclease8e-40164
NC_003919:4568892:458857845885784589378801Xanthomonas axonopodis pv. citri str. 306, complete genomeexodeoxyribonuclease III1e-38159
NC_007508:4593446:461308346130834613883801Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeexodeoxyribonuclease III2e-38159
NC_010717:4851000:486991348699134870713801Xanthomonas oryzae pv. oryzae PXO99A, complete genomeexodeoxyribonuclease III3e-38158
NC_015518:1638262:163826216382621638999738Acidianus hospitalis W1 chromosome, complete genomeexodeoxyribonuclease III Xth9e-38157
NC_004556:151593:163969163969164769801Xylella fastidiosa Temecula1, complete genomeexodeoxyribonuclease8e-38157
NC_010577:151926:163901163901164701801Xylella fastidiosa M23, complete genomeexodeoxyribonuclease III Xth8e-38157
NC_007333:1743890:177640517764051777208804Thermobifida fusca YX, complete genomeAP endonuclease, family 1:Exodeoxyribonuclease III xth7e-38157
NC_018524:4848154:486814548681454868945801Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeexodeoxyribonuclease III4e-37155
NC_014210:2597000:262021626202162621019804Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,exodeoxyribonuclease III Xth7e-35147
NC_013159:502928:506749506749507546798Saccharomonospora viridis DSM 43017, complete genomeexodeoxyribonuclease III5e-34144
NC_014532:3967463:396824739682473969014768Halomonas elongata DSM 2581, complete genomeexodeoxyribonuclease III Xth7e-32137
NC_003064:22535:475334753348309777Agrobacterium tumefaciens str. C58 plasmid AT, complete sequencehypothetical protein7e-26117
NC_003306:22228:472264722648002777Agrobacterium tumefaciens str. C58 plasmid AT, complete sequenceexodeoxyribonuclease III7e-26117
NC_009832:2969376:299188629918862992692807Serratia proteamaculans 568, complete genomeexodeoxyribonuclease III2e-25116
NC_014550:786692:786692786692787531840Arthrobacter arilaitensis Re117, complete genomeexodeoxyribonuclease III2e-25116
NC_013960:452493:469293469293470066774Nitrosococcus halophilus Nc4 chromosome, complete genomeexodeoxyribonuclease III Xth9e-25114
NC_005810:2180303:218692421869242187730807Yersinia pestis biovar Microtus str. 91001, complete genomeexonuclease III3e-24112
NC_006155:2461262:246507924650792465885807Yersinia pseudotuberculosis IP 32953, complete genomeexodeoxyribonuclease III3e-24112
NC_010159:2440947:245373324537332454539807Yersinia pestis Angola, complete genomeexodeoxyribonuclease III3e-24112
NC_010634:2376245:238287623828762383682807Yersinia pseudotuberculosis PB1/+, complete genomeexodeoxyribonuclease III3e-24112
NC_008149:1842500:184639718463971847203807Yersinia pestis Nepal516, complete genomeexodeoxyribonuclease III3e-24112
NC_008150:1705152:170974517097451710551807Yersinia pestis Antiqua, complete genomeexodeoxyribonuclease III3e-24112
NC_003143:2433190:243778324377832438589807Yersinia pestis CO92, complete genomeexodeoxyribonuclease III3e-24112
NC_017154:2430093:243468624346862435492807Yersinia pestis D106004 chromosome, complete genomeexodeoxyribonuclease III3e-24112
NC_017265:2087487:210331521033152104121807Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,exonuclease III3e-24112
NC_004088:2366000:238160923816092382424816Yersinia pestis KIM, complete genomeexonuclease III3e-24112
NC_016513:1958500:196302519630251963861837Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeDNase6e-24111
NC_008800:2448583:246308624630862463892807Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,exonuclease III5e-24111
NC_013416:1621469:162693016269301627733804Aggregatibacter actinomycetemcomitans D11S-1, complete genomeexodeoxyribonuclease III4e-24111
NC_016147:2820232:282232828223282823134807Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeexodeoxyribonuclease III4e-24111
NC_015224:2618192:263238326323832633189807Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,exonuclease III4e-24111
NC_012913:626449:644021644021644824804Aggregatibacter aphrophilus NJ8700, complete genomeexodeoxyribonuclease III8e-24110
NC_014125:766576:788296788296789066771Legionella pneumophila 2300/99 Alcoy chromosome, complete genomeexodeoxyribonuclease III1e-23110
NC_009494:775676:802257802257803027771Legionella pneumophila str. Corby chromosome, complete genomehypothetical protein1e-23110
NC_002927:2636694:265055726505572651339783Bordetella bronchiseptica RB50, complete genomeputative exodeoxyribonuclease III2e-23109
NC_007645:6461267:647900264790026479775774Hahella chejuensis KCTC 2396, complete genomeExonuclease III3e-23108
NC_013161:1023716:104358610435861044374789Cyanothece sp. PCC 8802, complete genomeexodeoxyribonuclease III5e-23108
NC_011726:1023690:104356010435601044348789Cyanothece sp. PCC 8801, complete genomeexodeoxyribonuclease III5e-23108
NC_006369:734080:764921764921765691771Legionella pneumophila str. Lens, complete genomehypothetical protein6e-23107
NC_006368:750356:779265779265780035771Legionella pneumophila str. Paris, complete genomehypothetical protein6e-23107
NC_002942:675829:696777696777697568792Legionella pneumophila subsp. pneumophila str. Philadelphia 1,exodeoxyribonuclease III5e-22104
NC_013421:2453078:245928524592852460103819Pectobacterium wasabiae WPP163, complete genomeexodeoxyribonuclease III8e-22103
NC_015589:2941953:295568529556852956482798Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeexodeoxyribonuclease III4e-21101
NC_013721:533048:536269536269537135867Gardnerella vaginalis 409-05, complete genomeputative exodeoxyribonuclease III8e-21100
NC_014644:1275038:129492512949251295797873Gardnerella vaginalis ATCC 14019 chromosome, complete genomeexodeoxyribonuclease III1e-20100
NC_014306:2703544:272386327238632724681819Erwinia billingiae Eb661, complete genomeExodeoxyribonuclease III3e-2099
NC_008268:361424:362762362762363676915Rhodococcus sp. RHA1, complete genomeprobable exodeoxyribonuclease III9e-2097.4
NC_020301:1084993:110253611025361103327792Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeexodeoxyribonuclease III4e-1995.1
NC_008783:671349:679571679571680362792Bartonella bacilliformis KC583, complete genomeexodeoxyribonuclease III1e-1894
NC_014834:2264108:229255922925592293329771Rhodopseudomonas palustris DX-1 chromosome, complete genomeexodeoxyribonuclease III Xth1e-1893.2
NC_012668:1623350:162670816267081627514807Vibrio cholerae MJ-1236 chromosome 1, complete sequenceexonuclease III2e-1892.8
NC_005955:947500:971373971373972155783Bartonella quintana str. Toulouse, complete genomeExodeoxyribonuclease III2e-1892.4
NC_009488:2037634:205824220582422059027786Orientia tsutsugamushi str. Boryong, complete genomeexodeoxyribonuclease III4e-1891.7
NC_010161:1598000:161246316124631613245783Bartonella tribocorum CIP 105476, complete genomeexodeoxyribonuclease III1e-1790.5
NC_008699:1132790:113765911376591138447789Nocardioides sp. JS614, complete genomeexodeoxyribonuclease III Xth4e-1788.6
NC_012846:1467446:148950914895091490291783Bartonella grahamii as4aup, complete genomeexodeoxyribonuclease III4e-1788.6
NC_002488:1812696:183613818361381836932795Xylella fastidiosa 9a5c, complete genomeexodeoxyribonuclease III6e-1684.7
NC_014664:2373451:239334623933462394152807Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeexodeoxyribonuclease III Xth1e-1583.2
NC_021177:6954675:695733069573306958109780Streptomyces fulvissimus DSM 40593, complete genomeExonuclease2e-1583.2
NC_006142:312000:318271318271319056786Rickettsia typhi str. Wilmington, complete genomeE.coli exonuclease III.1e-1480.5
NC_017066:312000:318285318285319070786Rickettsia typhi str. TH1527 chromosome, complete genomeexodeoxyribonuclease III1e-1480.5
NC_010103:1920585:192516219251621925968807Brucella canis ATCC 23365 chromosome I, complete sequenceexodeoxyribonuclease III (xth)3e-1479
NC_016778:1216739:123441612344161235222807Brucella canis HSK A52141 chromosome 1, complete sequenceexodeoxyribonuclease III3e-1479
NC_009505:1928000:193067219306721931541870Brucella ovis ATCC 25840 chromosome I, complete sequenceexodeoxyribonuclease III3e-1479
NC_004310:1923404:192698719269871927793807Brucella suis 1330 chromosome I, complete sequenceexodeoxyribonuclease III3e-1479
NC_015857:1954173:195775619577561958562807Brucella pinnipedialis B2/94 chromosome chromosome 1, completeexodeoxyribonuclease III3e-1479
NC_016797:1924248:192783119278311928637807Brucella suis VBI22 chromosome I, complete sequenceexodeoxyribonuclease III3e-1479
NC_017251:1923391:192697419269741927780807Brucella suis 1330 chromosome I, complete genomeexodeoxyribonuclease III3e-1479
NC_013119:1932402:193598519359851936791807Brucella microti CCM 4915 chromosome 1, complete sequenceexodeoxyribonuclease III3e-1479
NC_016111:5181475:520072452007245201512789Streptomyces cattleya NRRL 8057, complete genomeexonuclease4e-1478.2
NC_010169:1739402:174298517429851743791807Brucella suis ATCC 23445 chromosome I, complete sequenceexodeoxyribonuclease III (xth)5e-1478.2
NC_017043:1055569:106860810686081069435828Rickettsia montanensis str. OSU 85-930 chromosome, complete genomeexodeoxyribonuclease III9e-1477.4
NC_010742:1938428:194194819419481942817870Brucella abortus S19 chromosome 1, complete sequenceExodeoxyribonuclease III1e-1377
NC_003317:48375:660296602966898870Brucella melitensis 16M chromosome I, complete sequenceEXODEOXYRIBONUCLEASE III1e-1377
NC_009484:464342:468480468480469283804Acidiphilium cryptum JF-5 chromosome, complete genomeexodeoxyribonuclease III Xth1e-1377
NC_015186:573289:577427577427578230804Acidiphilium multivorum AIU301, complete genomeexodeoxyribonuclease III1e-1377
NC_006932:1939145:194372219437221944528807Brucella abortus biovar 1 str. 9-941 chromosome I, completeXth-2, exodeoxyribonuclease III1e-1376.6
NC_007618:1937261:194084419408441941650807Brucella melitensis biovar Abortus 2308 chromosome I, completeAP endonuclease, family 1:Exodeoxyribonuclease III xth:Endonuclease/exonuclease/phosphatase family1e-1376.6
NC_012441:1940545:194512219451221945928807Brucella melitensis ATCC 23457 chromosome I, complete sequenceexodeoxyribonuclease III1e-1376.6
NC_016795:456110:473746473746474552807Brucella abortus A13334 chromosome 1, complete sequenceexodeoxyribonuclease III1e-1376.6
NC_017244:1941974:194555719455571946363807Brucella melitensis M28 chromosome chromosome 1, complete sequenceExodeoxyribonuclease III1e-1376.6
NC_017246:1942293:194587619458761946682807Brucella melitensis M5-90 chromosome chromosome I, completeexodeoxyribonuclease III1e-1376.6
NC_017248:1933357:193694019369401937746807Brucella melitensis NI chromosome chromosome I, complete sequenceExodeoxyribonuclease III1e-1376.6
NC_016915:346000:351904351904352719816Rickettsia rickettsii str. Hlp#2 chromosome, complete genomeexodeoxyribonuclease III3e-1375.5
NC_007354:534865:555483555483556322840Ehrlichia canis str. Jake, complete genomeAP endonuclease, family1:ExodeoxyribonucleaseIII xth1e-1273.6
NC_014815:2363460:238021323802132381010798Micromonospora sp. L5 chromosome, complete genomeexodeoxyribonuclease iii xth1e-1273.6
NC_006831:622906:644209644209645045837Ehrlichia ruminantium str. Gardel, complete genomeExodeoxyribonuclease III3e-1272.4
NC_006832:627057:648534648534649370837Ehrlichia ruminantium str. Welgevonden, complete genomeExodeoxyribonuclease III3e-1272.4
NC_005295:647275:668689668689669525837Ehrlichia ruminantium str. Welgevonden, complete genomeputative exodeoxyribonuclease3e-1272.4
NC_013131:5226919:524525152452515246036786Catenulispora acidiphila DSM 44928, complete genomeexodeoxyribonuclease III Xth2e-1169.7