Pre_GI: BLASTN Hits

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Query: NC_017342:2733215 Staphylococcus aureus subsp. aureus TCH60 chromosome, complete

Start: 2733215, End: 2756848, Length: 23634

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002952:61046261046263067520214Staphylococcus aureus subsp. aureus MRSA252, complete genome08613BLASTN svgBLASTP svg
NC_007793:60650060650062556519066Staphylococcus aureus subsp. aureus USA300, complete genome07912BLASTN svgBLASTP svg
NC_010079:60700060700062610719108Staphylococcus aureus subsp. aureus USA300_TCH1516, complete07995BLASTN svgBLASTP svg
NC_007622:56750056750058887821379Staphylococcus aureus RF122, complete genome08013BLASTN svgBLASTP svg
NC_003923:59100059100061534324344Staphylococcus aureus subsp. aureus MW2, complete genome08189BLASTN svgBLASTP svg
NC_002951:62346162346164703323573Staphylococcus aureus subsp. aureus COL, complete genome08258BLASTN svgBLASTP svg
NC_007795:54178354178356019718415Staphylococcus aureus subsp. aureus NCTC 8325, complete genome08258BLASTN svgBLASTP svg
NC_002745:59794759794761962721681Staphylococcus aureus subsp. aureus N315, complete genome08270BLASTN svgBLASTP svg
NC_002758:62200062200064387421875Staphylococcus aureus subsp. aureus Mu50, complete genome08270BLASTN svgBLASTP svg
NC_002953:58843758843761403425598Staphylococcus aureus subsp. aureus MSSA476, complete genome08314BLASTN svgBLASTP svg
NC_004461:277291*27729132456847278Staphylococcus epidermidis ATCC 12228, complete genome3e-132480BLASTN svgBLASTP svg
NC_013893:2373730*2373730239918425455Staphylococcus lugdunensis HKU09-01 chromosome, complete genome3e-129470BLASTN svgBLASTP svg
NC_007168:24153612415361243618320823Staphylococcus haemolyticus JCSC1435, complete genome2e-38168BLASTN svgBLASTP svg
NC_011567:1*13972539725Anoxybacillus flavithermus WK1, complete genome1e-20109BLASTN svgBLASTP svg
NC_002976:15407941540794156113820345Staphylococcus epidermidis RP62A, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002951:49535495357109921565Staphylococcus aureus subsp. aureus COL, complete genome2e-0765.9BLASTN svgBLASTP svg