Pre_GI: BLASTN Hits

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Query: NC_017341:2544327 Staphylococcus aureus subsp. aureus str. JKD6008 chromosome,

Start: 2544327, End: 2563313, Length: 18987

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. S. aureus continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010079:25109512510951252993718987Staphylococcus aureus subsp. aureus USA300_TCH1516, complete036280BLASTN svgBLASTP svg
NC_007793:25108012510801252978718987Staphylococcus aureus subsp. aureus USA300, complete genome036280BLASTN svgBLASTP svg
NC_007795:24554682455468247857023103Staphylococcus aureus subsp. aureus NCTC 8325, complete genome036250BLASTN svgBLASTP svg
NC_002953:24356672435667245828222616Staphylococcus aureus subsp. aureus MSSA476, complete genome035200BLASTN svgBLASTP svg
NC_003923:24601302460130247911318984Staphylococcus aureus subsp. aureus MW2, complete genome035180BLASTN svgBLASTP svg
NC_002951:24480002448000246790519906Staphylococcus aureus subsp. aureus COL, complete genome034740BLASTN svgBLASTP svg
NC_002745:24467222446722246570618985Staphylococcus aureus subsp. aureus N315, complete genome034450BLASTN svgBLASTP svg
NC_009782:25193792519379253836318985Staphylococcus aureus subsp. aureus Mu3, complete genome034430BLASTN svgBLASTP svg
NC_002758:25153102515310253840923100Staphylococcus aureus subsp. aureus Mu50, complete genome034430BLASTN svgBLASTP svg
NC_007622:23993472399347242439425048Staphylococcus aureus RF122, complete genome028190BLASTN svgBLASTP svg
NC_002952:25505002550500257443923940Staphylococcus aureus subsp. aureus MRSA252, complete genome022650BLASTN svgBLASTP svg
NC_007168:66528466528468618220899Staphylococcus haemolyticus JCSC1435, complete genome02415BLASTN svgBLASTP svg
NC_004461:20020002002000202415522156Staphylococcus epidermidis ATCC 12228, complete genome01120BLASTN svgBLASTP svg
NC_012121:18941481894148191338819241Staphylococcus carnosus subsp. carnosus TM300, complete genome01017BLASTN svgBLASTP svg
NC_006322:19940001994000201730223303Bacillus licheniformis ATCC 14580, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013166:14097901409790143362423835Kangiella koreensis DSM 16069, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_002758:32588932588934825722369Staphylococcus aureus subsp. aureus Mu50, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_002953:30322330322332688823666Staphylococcus aureus subsp. aureus MSSA476, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_007622:27167327167329431622644Staphylococcus aureus RF122, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_009782:32589232589234826022369Staphylococcus aureus subsp. aureus Mu3, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_002745:32593232593234830022369Staphylococcus aureus subsp. aureus N315, complete genome2e-0661.9BLASTN svgBLASTP svg