Pre_GI: BLASTP Hits

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Query: NC_017328:4417000:4430067 Shigella flexneri 2002017 chromosome, complete genome

Start: 4430067, End: 4431047, Length: 981

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections. This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. Human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. Extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:4873351:487943548794354880415981Escherichia coli S88 chromosome, complete genomehypothetical protein0688
NC_008258:4345400:435829043582904359270981Shigella flexneri 5 str. 8401, complete genomehypothetical protein0688
NC_016822:4889656:489833548983354899315981Shigella sonnei 53G, complete genomehypothetical protein0687
NC_011751:5070597:507597350759735076953981Escherichia coli UMN026 chromosome, complete genomehypothetical protein0685
NC_010473:4630361:463644546364454637425981Escherichia coli str. K-12 substr. DH10B, complete genomehypothetical protein0685
AC_000091:4534935:454129445412944542274981Escherichia coli W3110 DNA, complete genomehypothetical protein0685
NC_000913:4528278:453463745346374535617981Escherichia coli K12, complete genomehypothetical protein0685
NC_012759:4467288:447337244733724474352981Escherichia coli BW2952 chromosome, complete genomehypothetical protein0685
NC_012947:3883484:389637638963763897356981Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein0685
NC_012967:4510393:451675245167524517732981Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein0685
NC_013364:5255700:526676252667625267742981Escherichia coli O111:H- str. 11128, complete genomehypothetical protein0682
NC_011601:4856717:487523848752384876218981Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein0679
NC_009801:4882684:489884348988434899823981Escherichia coli E24377A, complete genomehypothetical protein0679
NC_013361:5580741:558513055851305586110981Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein0678
NC_009800:4529504:454161745416174542597981Escherichia coli HS, complete genomehypothetical protein0675
NC_002695:5381576:539152253915225392502981Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein0675
NC_011353:5455224:546517054651705466150981Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein0675
NC_013008:5411285:542123154212315422211981Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein0675
NC_013941:5219841:522978752297875230767981Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein0675
NC_013353:5272863:529149152914915292471981Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein0674
AP010958:5272863:529149152914915292471981Escherichia coli O103:H2 str. 12009 DNA, complete genomeconserved predicted protein0674
CP002516:4199133:421283342128334213813981Escherichia coli KO11, complete genomeprotein of unknown function DUF303 acetylesterase0673
CP002185:4791811:479905747990574800037981Escherichia coli W, complete genomeconserved hypothetical protein0673
NC_016902:4199133:421283342128334213813981Escherichia coli KO11FL chromosome, complete genomehypothetical protein0673
NC_011750:4978000:498406949840694985049981Escherichia coli IAI39 chromosome, complete genomehypothetical protein0672
NC_011741:4570498:459725845972584598238981Escherichia coli IAI1 chromosome, complete genomehypothetical protein0672
CU928160:4570498:459725845972584598238981Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein0672
NC_010498:4930649:494123949412394942219981Escherichia coli SMS-3-5, complete genomehypothetical protein0670
NC_011745:5114500:512288251228825123862981Escherichia coli ED1a chromosome, complete genomehypothetical protein0670
NC_004431:5123325:513133751313375132317981Escherichia coli CFT073, complete genomeHypothetical protein yjhS precursor0669
NC_008563:4905186:491757649175764918556981Escherichia coli APEC O1, complete genomehypothetical protein0665
NC_007946:4875997:490134749013474902327981Escherichia coli UTI89, complete genomehypothetical protein0665
NC_008253:4817864:484184548418454842825981Escherichia coli 536, complete genomehypothetical protein0665
NC_007613:4403070:441040044104004411380981Shigella boydii Sb227, complete genomehypothetical protein0664
CP002797:4656327:466611746661174667034918Escherichia coli NA114, complete genomeHypothetical protein2e-179628
NC_004741:4364235:437894043789404379698759Shigella flexneri 2a str. 2457T, complete genomehypothetical protein5e-151533
NC_004337:4374500:438784443878444388602759Shigella flexneri 2a str. 301, complete genomehypothetical protein5e-151533
NC_011745:4862218:487690648769064877895990Escherichia coli ED1a chromosome, complete genomehypothetical protein3e-107388
NC_004431:3409389:347063034706303471619990Escherichia coli CFT073, complete genomeHypothetical protein yjhS precursor3e-107388
NC_011751:3453683:349372934937293494718990Escherichia coli UMN026 chromosome, complete genomehypothetical protein3e-107388
NC_002695:1929215:1941996194199619438491854Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein2e-105382
CU928145:1408280:1426724142672414285801857Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein2e-105382
NC_011748:1408280:1426724142672414285801857Escherichia coli 55989, complete genomehypothetical protein2e-105382
NC_013361:1754346:1756560175656017584131854Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein8e-104377
NC_002695:3468873:3484252348425234861051854Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein6e-104377
NC_011353:3573641:3588360358836035902131854Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein6e-104377
NC_013008:3525428:3543237354323735450901854Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein6e-104377
NC_002655:2142587:2143317214331721451671851Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded within prophage CP-933R5e-104377
NC_011601:1269500:1288980128898012908301851Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein4e-104377
NC_002655:3538656:3552256355225635534281173Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by prophage CP-933Y6e-102370
NC_010658:1933605:1953573195357319555341962Shigella boydii CDC 3083-94, complete genome2e-101369
NC_011353:2957962:2961641296164129635871947Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein5e-101367
NC_013008:2910567:2916512291651229184581947Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein7e-101367
NC_013364:1596278:1617129161712916190751947Escherichia coli O111:H- str. 11128, complete genomehypothetical protein7e-101367