Pre_GI: BLASTP Hits

Some Help

Query: NC_017328:303987:326072 Shigella flexneri 2002017 chromosome, complete genome

Start: 326072, End: 326509, Length: 438

Host Lineage: Shigella flexneri; Shigella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism, along with Shigella sonnei, is the major cause of shigellosis in industrialized countries and is responsible for endemic infections. This genus is named for the Japanese scientist (Shiga) who discovered them in the 1890s. They are closely related to the Escherichia group, and may be considered the same species. Human-specific pathogens that are transmitted via contaminated food and water and are the leading causes of endemic bacillary dysentery, and over 1 million deaths worldwide are attributed to them. The bacteria infect the epithelial lining of the colon, causing acute inflammation by entering the host cell cytoplasm and spreading intercellularly. Extremely virulent organisms that require very few cells in order to cause disease. Both the type III secretion system, which delivers effector molecules into the host cell, and some of the translocated effectors such as the invasion plasmid antigens (Ipas), are encoded on the plasmid. The bacterium produces a surface protein that localizes to one pole of the cell (IcsA) which binds to and promotes actin polymerization, resulting in movement of the bacterium through the cell cytoplasm, and eventually to neighboring cells, which results in inflammatory destruction of the mucosal lining.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:368942:392143392143392580438Salmonella enterica subsp. enterica serovar Choleraesuis strRz lysis protein8e-76281
NC_013364:2898964:290746329074632907900438Escherichia coli O111:H- str. 11128, complete genomeputative endopeptidase1e-74278
NC_011083:374000:393885393885394322438Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,bacteriophage lysis protein3e-74276
NC_011748:824367:838985838985839434450Escherichia coli 55989, complete genomebacteriophage lysis protein4e-74276
CU928145:824367:838985838985839434450Escherichia coli 55989 chromosome, complete genomebacteriophage lysis protein4e-74276
NC_009800:289000:309952309952310389438Escherichia coli HS, complete genomebacteriophage lysis protein2e-69260
CU928145:1408280:142983614298361430309474Escherichia coli 55989 chromosome, complete genomeEndopeptidase (Lysis protein Rz)3e-68256
NC_011748:1408280:142983614298361430309474Escherichia coli 55989, complete genomeEndopeptidase (Lysis protein Rz)3e-68256
NC_010067:2529750:257967425796742580111438Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-64244
NC_007384:2933625:293316429331642933628465Shigella sonnei Ss046, complete genomeendopeptidase-like protein3e-45179
NC_011415:1472500:149739714973971497861465Escherichia coli SE11 chromosome, complete genomeputative phage endopeptidase9e-42168
NC_011740:2769961:277523827752382775711474Escherichia fergusonii ATCC 35469, complete genomeputative murein endopeptidase; DLP12 prophage1e-41168
NC_012947:2366000:237736123773612377825465Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelysis protein2e-40164
NC_008563:1475500:148489514848951485371477Escherichia coli APEC O1, complete genomehypothetical protein2e-40164
NC_012947:3015985:301598530159853016446462Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelysis protein2e-40164
NC_013361:3112023:311748531174853117946462Escherichia coli O26:H11 str. 11368 chromosome, complete genomeendopeptidase7e-40162
NC_013941:699286:716243716243716716474Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeRz endopeptidase from lambdoid prophage DLP124e-40162
NC_008563:1175035:119629711962971196770474Escherichia coli APEC O1, complete genomeputative Rz endopeptidase from lambdoid prophage1e-39161
NC_007946:1239278:125891012589101259383474Escherichia coli UTI89, complete genomeputative Rz endopeptidase from lambdoid prophage DLP121e-39161
NC_011742:1177946:119983111998311200292462Escherichia coli S88 chromosome, complete genomemurein endopeptidase; DLP12 prophage1e-39161
NC_012967:531000:549576549576550037462Escherichia coli B str. REL606 chromosome, complete genomeputative murein endopeptidase5e-39159
NC_012947:3231893:323564232356423236103462Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelysis protein5e-39159
NC_011751:643976:663770663770664249480Escherichia coli UMN026 chromosome, complete genomeEndopeptidase from phage origin5e-37152
NC_011740:2072173:210037421003742100853480Escherichia fergusonii ATCC 35469, complete genomeEndopeptidase from phage origin (Lysis protein Rz)2e-36150
NC_014121:3627588:365891236589123659370459Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completebacteriophage lysis protein1e-35147
NC_009436:2776410:281037328103732810834462Enterobacter sp. 638, complete genomebacteriophage lysis protein2e-35147
NC_012125:1330066:135341813534181353885468Salmonella enterica subsp. enterica serovar Paratyphi C straingp152e-33140
NC_013364:3312379:333608333360833336550468Escherichia coli O111:H- str. 11128, complete genomeputative endopeptidase2e-32137
NC_011353:2957962:295885129588512959318468Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebacteriophage lysis protein2e-32137
NC_000913:558920:577330577330577791462Escherichia coli K12, complete genomeDLP12 prophage; predicted murein endopeptidase4e-32136
NC_010473:498252:516662516662517123462Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted murein endopeptidase4e-32136
NC_010473:623810:629922629922630383462Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted murein endopeptidase4e-32136
AC_000091:558920:577330577330577791462Escherichia coli W3110 DNA, complete genomepredicted murein endopeptidase4e-32136
NC_012759:461680:480090480090480551462Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative murein endopeptidase4e-32136
NC_013008:2910567:291361829136182914085468Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeendopeptidase of prophage CP-933U4e-31133
NC_002695:1929215:194614119461411946608468Escherichia coli O157:H7 str. Sakai, complete genomeputative endopeptidase4e-31133
NC_011748:1773642:178211417821141782578465Escherichia coli 55989, complete genomeputative murein endopeptidase; DLP12 prophage4e-30129
CU928145:1773642:178211417821141782578465Escherichia coli 55989 chromosome, complete genomeputative murein endopeptidase; DLP12 prophage4e-30129
NC_011205:1345511:137223813722381372738501Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bacteriophage lysis protein2e-29127
NC_011294:1220526:123638912363891236868480Salmonella enterica subsp. enterica serovar Enteritidis strphage lysozyme4e-29126
NC_016831:1734292:174088017408801741359480Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative phage lysozyme4e-29126
NC_011283:2836000:289710628971062897570465Klebsiella pneumoniae 342 chromosome, complete genomebacteriophage lysis protein1e-27121
NC_016816:1970189:199332319933231993823501Pantoea ananatis LMG 5342, complete genomeputative phage endopeptidase2e-27121
NC_014562:1772842:177839417783941778870477Pantoea vagans C9-1 chromosome, complete genomeputative endopeptidase2e-24111
NC_011205:609464:635672635672636142471Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853bacteriophage lysis protein4e-23106
NC_010067:2304313:232553223255322326428897Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-23106
NC_011147:2496808:250358625035862504053468Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein9e-23105
NC_013282:1804909:182556518255651826029465Cronobacter turicensis, complete genomeEndopeptidase1e-22105
NC_006511:2501500:250805025080502508499450Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein2e-22104
NC_017046:2756000:275602427560242756497474Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein8e-2095.9
NC_012967:1403733:141822514182251418524300Escherichia coli B str. REL606 chromosome, complete genomeputative defective peptidase2e-1890.9
AC_000091:1407693:142505914250591425358300Escherichia coli W3110 DNA, complete genomepredicted defective peptidase2e-1890.9
NC_000913:1404000:142136914213691421668300Escherichia coli K12, complete genomeRac prophage; predicted defective peptidase2e-1890.9
NC_010473:1493983:151076515107651511064300Escherichia coli str. K-12 substr. DH10B, complete genomeRac prophage; predicted defective peptidase2e-1890.9
NC_020063:2565605:257162125716212572103483Enterobacteriaceae bacterium strain FGI 57, complete genomeBacteriophage lysis protein7e-1889.4
NC_013892:671000:689248689248689727480Xenorhabdus bovienii SS-2004 chromosome, complete genomeRac prophage; prophage lambda endopeptidase2e-1477.4
NC_013892:2005480:200921120092112009678468Xenorhabdus bovienii SS-2004 chromosome, complete genomeendopeptidase (Protein gp15)2e-1477.4
NC_015663:4767443:477305747730574773434378Enterobacter aerogenes KCTC 2190 chromosome, complete genomelysis protein2e-1168.2
NC_014228:2270000:228932722893272289815489Xenorhabdus nematophila ATCC 19061, complete genomeputative Phosphoprotein phosphatase3e-1167
NC_009783:1956000:197415019741501974632483Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein2e-1064.7
NC_016514:2476359:249623824962382496627390Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein2e-1064.3
NC_013850:1887556:191145119114511911828378Klebsiella variicola At-22 chromosome, complete genomelysis protein3e-1063.9
NC_010554:539122:544685544685545146462Proteus mirabilis HI4320, complete genomephage endopeptidase3e-0857.4
NC_017047:1906000:191893719189371919470534Rahnella aquatilis HX2 chromosome, complete genomelysis protein3e-0754.3
NC_007712:1219957:124908112490811249551471Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein5e-0753.1
NC_017060:59500:924479244792953507Rahnella aquatilis HX2 plasmid PRA1, complete sequencelysis protein6e-0649.7
NC_014228:3022903:304108930410893041544456Xenorhabdus nematophila ATCC 19061, complete genomeputative Phosphoprotein phosphatase6e-0649.7