Pre_GI: BLASTP Hits

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Query: NC_017265:4265659:4283959 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 4283959, End: 4284756, Length: 798

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:1631052:163365216336521634449798Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-156550
NC_006155:4302826:432118243211824321979798Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein3e-156550
NC_010634:4234932:425227942522794253076798Yersinia pseudotuberculosis PB1/+, complete genomeFis family transcriptional regulator3e-156550
NC_003143:4006884:400948440094844010281798Yersinia pestis CO92, complete genomehypothetical protein3e-156550
NC_010465:429095:431695431695432492798Yersinia pseudotuberculosis YPIII, complete genometranscriptional regulator, Fis family3e-156550
NC_009381:222735:225326225326226123798Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-156550
NC_009708:372422:375022375022375819798Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeFis family transcriptional regulator3e-156550
NC_014029:3958811:396141139614113962208798Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-156550
NC_017154:3898925:390152539015253902322798Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-156550
NC_005126:349658:388056388056388856801Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-95347
NC_012962:293976:307813307813308613801Photorhabdus asymbiotica, complete genomehypothetical protein8e-95346
NC_013892:274297:282037282037282831795Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein1e-81302
NC_014228:4331327:434401543440154344812798Xenorhabdus nematophila ATCC 19061, complete genomeConserved Hypothetical protein (probable component of SSt VI cluster)9e-81300
NC_015968:4117835:4141012414101241431262115Enterobacter asburiae LF7a chromosome, complete genomeSigma 54 interacting domain-containing protein5e-1271.6
NC_013421:1744928:1752564175256417541621599Pectobacterium wasabiae WPP163, complete genomeSigma 54 interacting domain protein4e-1065.5
NC_012912:483390:4897564897564913571602Dickeya zeae Ech1591, complete genomeSigma 54 interacting domain protein1e-0963.9