Pre_GI: BLASTP Hits

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Query: NC_017265:4265659:4269735 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 4269735, End: 4270043, Length: 309

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:1631052:1647301164730116486711371Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-55213
NC_003143:4006884:4023133402313340245031371Yersinia pestis CO92, complete genomehypothetical protein3e-55213
NC_008149:4053363:4065623406562340669931371Yersinia pestis Nepal516, complete genomehypothetical protein3e-55213
NC_005810:4469156:4481609448160944829791371Yersinia pestis biovar Microtus str. 91001, complete genomeRhs family protein3e-55213
NC_004088:266543:2788022788022801721371Yersinia pestis KIM, complete genomerhsD protein3e-55213
NC_009381:222735:2389632389632403331371Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-55213
NC_014029:3958811:3975060397506039764301371Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-55213
NC_017154:3898925:3915174391517439165441371Yersinia pestis D106004 chromosome, complete genomehypothetical protein3e-55213
NC_017160:4073611:4085871408587140872411371Yersinia pestis D182038 chromosome, complete genomehypothetical protein3e-55213
NC_010501:4311873:432180743218074322502696Pseudomonas putida W619, complete genomeRHS protein2e-30130
NC_020209:4643901:4648647464864746530204374Pseudomonas poae RE*1-1-14, complete genomehypothetical protein3e-27120
NC_011898:1802971:181865118186511819541891Clostridium cellulolyticum H10, complete genomehypothetical protein3e-1580.5
NC_014914:439285:4458524458524479122061Taylorella equigenitalis MCE9 chromosome, complete genomeRhs-family protein1e-1478.6
NC_015733:1793399:1800624180062418028192196Pseudomonas putida S16 chromosome, complete genome4e-0856.6
NC_015379:6714545:6719349671934967237674419Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein5e-0753.1
NC_013282:116649:123029123029123787759Cronobacter turicensis, complete genomehypothetical protein5e-0650.1