Pre_GI: BLASTP Hits

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Query: NC_017265:4065625:4072446 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 4072446, End: 4072733, Length: 288

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:687471:694292694292694579288Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-49194
NC_009381:3680638:368748136874813687768288Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-49194
NC_003143:398748:411235411235411522288Yersinia pestis CO92, complete genomehypothetical protein1e-49194
NC_008150:4373722:438054343805434380830288Yersinia pestis Antiqua, complete genomehypothetical protein1e-49194
NC_004088:4202247:420906842090684209355288Yersinia pestis KIM, complete genomehypothetical protein1e-49194
NC_008149:318860:330443330443330730288Yersinia pestis Nepal516, complete genomehypothetical protein1e-49194
NC_005810:4306716:431336043133604313647288Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-49194
NC_014306:4376012:4395682439568243967071026Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein3e-33140
NC_017060:125480:1453521453521464341083Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion protein2e-1167.8
NC_015062:130359:1485221485221496041083Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencetype VI secretion protein, VC_A0111 family2e-1167.8
NC_005126:3812054:3811002381100238120901089Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-0962
NC_008253:2965573:2969200296920029702791080Escherichia coli 536, complete genomehypothetical protein1e-0961.6
NC_011742:3057444:3060870306087030619581089Escherichia coli S88 chromosome, complete genomehypothetical protein1e-0961.6
NC_012731:2302974:2326872232687223279571086Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-0961.2
NC_009648:3476000:3494988349498834960701083Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein3e-0960.8
NC_012962:3568046:3575095357509535761471053Photorhabdus asymbiotica, complete genomehypothetical protein2e-0960.8
NC_011283:942594:9435379435379446191083Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion protein7e-0959.3
NC_013971:465318:4670514670514681331083Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein9e-0958.9
NC_009778:1956225:1973284197328419743661083Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein9e-0855.5
NC_013282:2026083:2055691205569120567731083Cronobacter turicensis, complete genomehypothetical protein2e-0754.3
NC_012962:4427000:4432530443253044335611032Photorhabdus asymbiotica, complete genomehypothetical protein4e-0753.5
NC_004088:2937077:2960107296010729611921086Yersinia pestis KIM, complete genomehypothetical protein5e-0753.1
NC_014029:1760948:1760948176094817620331086Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-0753.1
NC_017168:3948514:3971543397154339726281086Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-0753.1
NC_017265:2557476:2580505258050525815901086Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-0753.1
NC_009708:2788855:2810553281055328116381086Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein5e-0753.1
NC_010465:2820500:2840999284099928420841086Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein, VC_A0111 family3e-0650.4
NC_010501:3575726:3575726357572635768231098Pseudomonas putida W619, complete genometype VI secretion protein, VC_A0111 family3e-0650.4
NC_009381:1655731:1677437167743716785221086Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-0650.1