Pre_GI: BLASTP Hits

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Query: NC_017265:3724500:3741721 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 3741721, End: 3742152, Length: 432

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:341233:359131359131359562432Yersinia pestis A1122 chromosome, complete genomebiopolymer transport protein ExbD4e-78289
NC_004088:3859173:387636138763613876792432Yersinia pestis KIM, complete genomeTonB-complex protein4e-78289
NC_003143:741169:745740745740746171432Yersinia pestis CO92, complete genomeExbD/TolR-family transport protein4e-78289
NC_010159:259695:276883276883277314432Yersinia pestis Angola, complete genometonB system transport protein ExbD4e-78289
NC_005810:3333000:333768233376823338113432Yersinia pestis biovar Microtus str. 91001, complete genomebiopolymer transport protein ExbD4e-78289
NC_009708:692508:697133697133697564432Yersinia pseudotuberculosis IP 31758 chromosome, complete genomebiopolymer transport protein ExbD4e-78289
NC_014029:792719:797284797284797715432Yersinia pestis Z176003 chromosome, complete genomeExbD/TolR-family transport protein4e-78289
NC_017154:734875:739446739446739877432Yersinia pestis D106004 chromosome, complete genomeExbD/TolR-family transport protein4e-78289
NC_017160:737000:741625741625742056432Yersinia pestis D182038 chromosome, complete genomeExbD/TolR-family transport protein4e-78289
NC_010634:3905369:392659939265993927030432Yersinia pseudotuberculosis PB1/+, complete genomeTonB system transport protein ExbD1e-77287
NC_010465:733916:737503737503737934432Yersinia pseudotuberculosis YPIII, complete genomeTonB system transport protein ExbD4e-77286
NC_008150:3430000:344724334472433447668426Yersinia pestis Antiqua, complete genomeExbD/TolR-family transport protein5e-77285
NC_008149:650706:655283655283655708426Yersinia pestis Nepal516, complete genomeExbD/TolR-family transport protein5e-77285
NC_009381:522731:527308527308527733426Yersinia pestis Pestoides F chromosome, complete genomebiopolymer transport protein ExbD5e-77285
NC_006155:3992818:401514240151424015567426Yersinia pseudotuberculosis IP 32953, complete genomeExbD/TolR-family transport protein2e-76283
NC_008800:3955284:397258139725813973006426Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,biopolymer transport protein ExbD1e-72271
NC_015224:3820338:385084438508443851269426Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,biopolymer transport protein ExbD2e-71267
NC_007613:2981829:300178030017803002205426Shigella boydii Sb227, complete genomeExbD3e-54209
NC_005773:208000:230750230750231175426Pseudomonas syringae pv. phaseolicola 1448A, complete genomeTonB system transport protein ExbD12e-48190
NC_013209:2414500:242392024239202424369450Acetobacter pasteurianus IFO 3283-01, complete genomeExbD/TolR1e-38158
NC_017100:2414075:242512724251272425576450Acetobacter pasteurianus IFO 3283-03, complete genomeExbD/TolR1e-38158
NC_017108:2413000:242246424224642422913450Acetobacter pasteurianus IFO 3283-12, complete genomeExbD/TolR1e-38158
NC_017111:2413000:242248224224822422931450Acetobacter pasteurianus IFO 3283-32, complete genomeExbD/TolR1e-38158
NC_017121:2413000:242246924224692422918450Acetobacter pasteurianus IFO 3283-07, complete genomeExbD/TolR1e-38158
NC_017125:2415500:242510724251072425556450Acetobacter pasteurianus IFO 3283-22, complete genomeExbD/TolR1e-38158
NC_017146:2416000:242514924251492425598450Acetobacter pasteurianus IFO 3283-26, complete genomeExbD/TolR1e-38158
NC_014217:800406:801486801486802025540Starkeya novella DSM 506 chromosome, complete genomeTonB system transport protein ExbD6e-38155
NC_008783:177161:185469185469185927459Bartonella bacilliformis KC583, complete genomeTonB system transport protein ExbD1e-28124
NC_008011:860000:873921873921874355435Lawsonia intracellularis PHE/MN1-00, complete genomeBiopolymer transport protein2e-1994
NC_004578:4465247:448182944818294482293465Pseudomonas syringae pv. tomato str. DC3000, complete genometolR protein2e-1891.3
NC_018080:4465618:448459944845994485039441Pseudomonas aeruginosa DK2 chromosome, complete genomeTolR protein2e-1891.3
NC_008463:4566976:459652945965294596969441Pseudomonas aeruginosa UCBPP-PA14, complete genomeTolR protein2e-1891.3
NC_011770:4763506:478338547833854783825441Pseudomonas aeruginosa LESB58, complete genomeTolR protein2e-1891.3
NC_002516:1031386:105456610545661055006441Pseudomonas aeruginosa PAO1, complete genomeTolR protein2e-1891.3
NC_004129:5481629:549889654988965499348453Pseudomonas fluorescens Pf-5, complete genomebiopolymer transport protein TolR1e-1788.6
NC_010943:9294:122121221212637426Stenotrophomonas maltophilia K279a, complete genomeputative biopolymer transport ExbD1 protein2e-1684.3
NC_014315:114151:138951138951139397447Nitrosococcus watsoni C-113 chromosome, complete genomeprotein TolR4e-1683.6
NC_010581:561579:582308582308582775468Beijerinckia indica subsp. indica ATCC 9039, complete genomeprotein TolR4e-1683.2
NC_010278:1749579:175830617583061758716411Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,biopolymer transport ExbD protein5e-1683.2
NC_010939:1809446:182146818214681821878411Actinobacillus pleuropneumoniae serovar 7 str. AP76, completebiopolymer transport ExbD protein5e-1683.2
NC_009053:1785447:179758017975801797990411Actinobacillus pleuropneumoniae L20, complete genomebiopolymer transport ExbD protein5e-1683.2
NC_011071:10842:124281242812853426Stenotrophomonas maltophilia R551-3, complete genomeBiopolymer transport protein ExbD/TolR5e-1682.8
NC_008340:277223:278226278226278675450Alkalilimnicola ehrlichei MLHE-1, complete genomeBiopolymer transport protein ExbD/TolR9e-1682
NC_014924:725380:750181750181750609429Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeprotein TolR1e-1581.6
NC_014394:2765261:278552127855212785928408Gallionella capsiferriformans ES-2 chromosome, complete genomeprotein TolR1e-1478.6
NC_016024:156000:161382161382161813432Candidatus Chloracidobacterium thermophilum B chromosome chromosomebiopolymer transport protein3e-1477
NC_002488:1:122851228512707423Xylella fastidiosa 9a5c, complete genomebiopolymer transport ExbD1 protein4e-1476.6
NC_014910:2585747:260199526019952602405411Alicycliphilus denitrificans BC chromosome, complete genomebiopolymer transport protein exbd/tolr4e-1476.6
NC_004917:340997:342657342657343037381Helicobacter hepaticus ATCC 51449, complete genomebiopolymer transport protein4e-1476.6
NC_004757:230541:250127250127250543417Nitrosomonas europaea ATCC 19718, complete genomeBiopolymer transport protein ExbD/TolR6e-1475.9
NC_014540:2908912:291779329177932918215423Burkholderia sp. CCGE1003 chromosome 2, complete sequenceBiopolymer transport protein ExbD/TolR9e-1475.5
NC_008781:3056407:307737830773783077812435Polaromonas naphthalenivorans CJ2, complete genomeBiopolymer transport protein ExbD/TolR1e-1375.5
NC_014932:1314881:135014513501451350510366Bartonella clarridgeiae 73, complete genomebiopolymer transport protein exbD1e-1375.1
NC_008783:145305:159281159281159733453Bartonella bacilliformis KC583, complete genomeprotein TolR1e-1375.1
NC_018012:1935500:195440119544011954844444Thiocystis violascens DSM 198 chromosome, complete genomecell division and transport-associated protein TolR2e-1374.3
NC_004556:1:122651226512684420Xylella fastidiosa Temecula1, complete genomebiopolymer transport ExbD1 protein2e-1374.3
NC_015726:2817352:283644228364422836885444Cupriavidus necator N-1 chromosome 1, complete sequencebiopolymer transport protein ExbD3e-1373.9
NC_007973:2888824:291116429111642911601438Ralstonia metallidurans CH34 chromosome 1, complete sequenceBiopolymer transport protein ExbD/TolR4e-1373.6
NC_011296:909558:929488929488929892405Thermodesulfovibrio yellowstonii DSM 11347, complete genomeTolR protein4e-1373.2
NC_010577:1:121561215612566411Xylella fastidiosa M23, complete genomeBiopolymer transport protein ExbD/TolR4e-1373.2
NC_008060:341851:356451356451356900450Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceBiopolymer transport protein ExbD/TolR7e-1372.4
NC_011000:3493575:349740734974073497856450Burkholderia cenocepacia J2315 chromosome 1, complete sequenceputative TolR-related protein7e-1372.4
NC_011992:1505106:150908715090871509497411Acidovorax ebreus TPSY, complete genomeBiopolymer transport protein ExbD/TolR1e-1272
NC_014311:2733897:273631027363102736744435Ralstonia solanacearum PSI07 chromosome, complete genomeprotein tolR, component of the tol-pal system3e-1270.9
NC_009715:399159:401369401369401749381Campylobacter curvus 525.92 chromosome, complete genomeTonB system transport protein ExbD3e-1270.5
NC_012856:737170:758360758360758794435Ralstonia pickettii 12D chromosome 1, complete genomeprotein TolR4e-1270.1
NC_010682:701912:720524720524720958435Ralstonia pickettii 12J chromosome 1, complete sequenceprotein TolR4e-1270.1
NC_007953:1088933:108965810896581090128471Burkholderia xenovorans LB400 chromosome 3, complete sequenceBiopolymer transport protein ExbD/TolR9e-1268.9
NC_002929:3568106:356810635681063568564459Bordetella pertussis Tohama I, complete genomeputative TolR-like translocation protein9e-1268.9
NC_014118:2417838:243539924353992435824426Burkholderia sp. CCGE1002 chromosome chromosome 2, completeBiopolymer transport protein ExbD/TolR1e-1168.2
NC_012440:373863:380844380844381248405Persephonella marina EX-H1, complete genomebiopolymer transport protein ExbD1e-1168.2
NC_003902:2469500:250536925053692505806438Xanthomonas campestris pv. campestris str. ATCC 33913, completebiopolymer transport protein4e-1166.6
NC_014166:2319447:233680523368052337194390Arcobacter nitrofigilis DSM 7299 chromosome, complete genomebiopolymer transport protein ExbD/TolR7e-1165.9
NC_007404:387827:389505389505389912408Thiobacillus denitrificans ATCC 25259, complete genomebiopolymer transport protein, ExbD/TolR family1e-1064.7
NC_016513:810259:821617821617822063447Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeTonB system transport protein ExbD5e-1063.2
NC_004556:1:126911269113101411Xylella fastidiosa Temecula1, complete genomebiopolymer transport ExbD2 protein6e-1062.8
NC_010577:1:125731257312983411Xylella fastidiosa M23, complete genomeBiopolymer transport protein ExbD/TolR6e-1062.8
NC_002488:1:127111271113121411Xylella fastidiosa 9a5c, complete genomebiopolymer transport ExbD2 protein8e-1062.4
NC_015276:2171355:217446821744682174890423Marinomonas mediterranea MMB-1 chromosome, complete genomeBiopolymer transport protein ExbD/TolR9e-1062.4
NC_014118:2417838:243583424358342436265432Burkholderia sp. CCGE1002 chromosome chromosome 2, completeBiopolymer transport protein ExbD/TolR1e-0962
NC_017192:2114433:212032021203202120709390Arcobacter sp. L, complete genomebiopolymer transport protein ExbD1e-0962
NC_014761:1321187:134156413415641341959396Oceanithermus profundus DSM 14977 chromosome, complete genomebiopolymer transport protein exbd/tolr2e-0961.6
NC_011071:10842:128571285713270414Stenotrophomonas maltophilia R551-3, complete genomeBiopolymer transport protein ExbD/TolR1e-0961.6
NC_010943:9294:126411264113054414Stenotrophomonas maltophilia K279a, complete genomeputative biopolymer transport ExbD2 protein1e-0961.6
NC_014323:3195178:321381532138153214234420Herbaspirillum seropedicae SmR1 chromosome, complete genomebiopolymer transport ExbD/TolR protein2e-0961.2
NC_003919:2435058:243459724345972435061465Xanthomonas axonopodis pv. citri str. 306, complete genomebiopolymer transport protein2e-0960.8
NC_011883:1601552:161353616135361613970435Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,Biopolymer transport protein ExbD/TolR5e-0959.7
NC_002977:2407392:242890124289012429305405Methylococcus capsulatus str. Bath, complete genomebiopolymer transport protein, ExbD/TolR family6e-0959.7
NC_008599:1489868:149940114994011499793393Campylobacter fetus subsp. fetus 82-40, complete genomeexbd olr family transport protein8e-0959.3
NC_006677:1391984:141283914128391413264426Gluconobacter oxydans 621H, complete genomeBiopolymer transport ExbD protein1e-0858.9
NC_014008:354292:356113356113356520408Coraliomargarita akajimensis DSM 45221 chromosome, complete genomeBiopolymer transport protein ExbD/TolR1e-0858.5
NC_017187:1511567:152020815202081520597390Arcobacter butzleri ED-1, complete genomebiopolymer transport protein ExbD1e-0858.5
NC_009850:1601982:160470116047011605090390Arcobacter butzleri RM4018, complete genomebiopolymer transport protein ExbD1e-0858.5
NC_016147:1788219:178821917882191788698480Pseudoxanthomonas spadix BD-a59 chromosome, complete genomebiopolymer transport protein2e-0858.2
NC_014315:2659479:267831626783162678726411Nitrosococcus watsoni C-113 chromosome, complete genomebiopolymer transport protein ExbD/TolR7e-0856.2
NC_000911:15937:325243252432952429Synechocystis sp. PCC 6803, complete genomebiopolymer transport protein6e-0856.2
NC_017039:15937:325243252432952429Synechocystis sp. PCC 6803 substr. PCC-P, complete genomebiopolymer transport ExbD protein6e-0856.2
NC_017052:15937:325243252432952429Synechocystis sp. PCC 6803 substr. PCC-N, complete genomebiopolymer transport ExbD protein6e-0856.2
NC_017277:15937:325243252432952429Synechocystis sp. PCC 6803, complete genomebiopolymer transport ExbD protein6e-0856.2
NC_020126:1830147:183607618360761836573498Myxococcus stipitatus DSM 14675, complete genomebiopolymer ExbD/TolR family transporter3e-0753.9
NC_002977:652481:668848668848669273426Methylococcus capsulatus str. Bath, complete genomebiopolymer transport protein, ExbD/TolR family8e-0752.4
NC_014012:3356629:335725133572513357661411Shewanella violacea DSS12, complete genomeTonB system transport protein ExbD21e-0652
NC_008027:5576458:559502655950265595427402Pseudomonas entomophila L48, complete genomeBiopolymer transport protein ExbD/TolR2e-0651.6
NC_010794:2157920:217854721785472178966420Methylacidiphilum infernorum V4, complete genomeBiopolymer transport protein2e-0651.6
NC_011891:315182:322069322069322515447Anaeromyxobacter dehalogenans 2CP-1, complete genomeBiopolymer transport protein ExbD/TolR2e-0651.2
NC_011145:306623:313519313519313965447Anaeromyxobacter sp. K, complete genomeBiopolymer transport protein ExbD/TolR2e-0651.2
NC_013446:3209000:322579332257933226224432Comamonas testosteroni CNB-2, complete genomeBiopolymer transport protein ExbD/TolR2e-0651.2
NC_012660:4149487:416806741680674168495429Pseudomonas fluorescens SBW25 chromosome, complete genomebiopolymer transport protein3e-0650.8
NC_007760:308500:310979310979311425447Anaeromyxobacter dehalogenans 2CP-C, complete genomeBiopolymer transport protein ExbD/TolR3e-0650.4
NC_013421:4714478:475547647554764755877402Pectobacterium wasabiae WPP163, complete genomeBiopolymer transport protein ExbD/TolR3e-0650.4
NC_012039:412837:444033444033444422390Campylobacter lari RM2100, complete genomeTonB system transport protein ExbD4e-0650.1