Pre_GI: BLASTP Hits

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Query: NC_017265:3724500:3731657 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 3731657, End: 3732523, Length: 867

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:341233:349067349067349933867Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-164577
NC_008150:3430000:343717934371793438045867Yersinia pestis Antiqua, complete genomehypothetical protein2e-164577
NC_004088:3859173:386629738662973867163867Yersinia pestis KIM, complete genomehypothetical protein2e-164577
NC_005810:3333000:334731133473113348177867Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-164577
NC_008149:650706:664906664906665772867Yersinia pestis Nepal516, complete genomemembrane protein2e-164577
NC_003143:741169:755369755369756235867Yersinia pestis CO92, complete genomehypothetical protein2e-164577
NC_009381:522731:536930536930537796867Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-164577
NC_014029:792719:806913806913807779867Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-164577
NC_017154:734875:749076749076749942867Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-164577
NC_017160:737000:751254751254752120867Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-164577
NC_010159:259695:266819266819267685867Yersinia pestis Angola, complete genomehypothetical protein7e-164576
NC_010634:3905369:391653839165383917404867Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein3e-156551
NC_006155:3992818:400504740050474005943897Yersinia pseudotuberculosis IP 32953, complete genomeputative membrane protein.7e-156549
NC_010465:733916:747130747130748011882Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein5e-151533
NC_009708:692508:706763706763707584822Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein5e-141500
NC_015224:3820338:384102738410273841860834Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative tight adherance operon protein3e-71268
NC_008800:3955284:396275339627533963586834Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative tight adherance operon protein8e-71267
NC_013416:668152:685540685540686364825Aggregatibacter actinomycetemcomitans D11S-1, complete genomeRcpC6e-2098.2
NC_016513:974402:991799991799992623825Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completeflp operon protein C6e-2098.2
NC_002940:1065246:106954010695401070376837Haemophilus ducreyi 35000HP, complete genomeflp operon protein C5e-2098.2
NC_012913:167034:181153181153181980828Aggregatibacter aphrophilus NJ8700, complete genomeRcpC3e-1892.4
NC_013716:4306695:436736843673684368240873Citrobacter rodentium ICC168, complete genomeputative tight adherence protein RcpC9e-0754.3