Pre_GI: BLASTP Hits

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Query: NC_017265:2586729:2609546 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 2609546, End: 2611084, Length: 1539

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:809943:8233748233748249181545Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein01061
NC_008149:3556999:3580308358030835818461539Yersinia pestis Nepal516, complete genomehypothetical protein01061
NC_008150:317903:3322793322793338171539Yersinia pestis Antiqua, complete genomehypothetical protein01061
NC_008149:2802392:2825209282520928267471539Yersinia pestis Nepal516, complete genomehypothetical protein01061
NC_014029:1702338:1726459172645917279971539Yersinia pestis Z176003 chromosome, complete genomehypothetical protein01061
NC_017154:902739:9171169171169186541539Yersinia pestis D106004 chromosome, complete genomehypothetical protein01061
NC_017160:905783:9192259192259207631539Yersinia pestis D182038 chromosome, complete genomehypothetical protein01061
NC_017168:3286:1941219412209501539Yersinia pestis A1122 chromosome, complete genomehypothetical protein01061
NC_005810:1467772:1485848148584814873921545Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein01061
NC_004088:2966331:2989145298914529906891545Yersinia pestis KIM, complete genomehypothetical protein01061
NC_003143:1059580:1084324108432410858681545Yersinia pestis CO92, complete genomehypothetical protein01061
NC_004088:3689000:3712431371243137139751545Yersinia pestis KIM, complete genomehypothetical protein01061
NC_010159:172469:1860181860181875561539Yersinia pestis Angola, complete genomehypothetical protein01058
NC_009381:588137:6015626015626031061545Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein01056
NC_010634:3720214:3743494374349437450321539Yersinia pseudotuberculosis PB1/+, complete genomeEvpB family type VI secretion protein01054
NC_006155:1756000:1776335177633517778851551Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein01051
NC_005810:3917254:3933370393337039349201551Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein01050
NC_003143:1630000:1656937165693716584871551Yersinia pestis CO92, complete genomehypothetical protein01050
NC_010465:893921:9073339073339088771545Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein, EvpB/VC_A0108 family01050
NC_010634:1755548:1776563177656317781071545Yersinia pseudotuberculosis PB1/+, complete genomeEvpB family type VI secretion protein01050
NC_008150:844727:8708078708078723511545Yersinia pestis Antiqua, complete genomehypothetical protein01049
NC_006155:3805640:3830413383041338319571545Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein01049
NC_009381:1682000:1706478170647817080221545Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein01049
NC_014029:961522:9749649749649765081545Yersinia pestis Z176003 chromosome, complete genomehypothetical protein01049
NC_017154:1644404:1668526166852616700701545Yersinia pestis D106004 chromosome, complete genomehypothetical protein01049
NC_017160:1628500:1649021164902116505651545Yersinia pestis D182038 chromosome, complete genomehypothetical protein01049
NC_017168:3977767:4000584400058440021281545Yersinia pestis A1122 chromosome, complete genomehypothetical protein01049
NC_009708:874770:8881868881868897361551Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein01048
NC_009708:2788855:2842819284281928443691551Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein01048
NC_009708:915814:9333999333999349521554Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein01027
NC_009832:1946401:1959481195948119610281548Serratia proteamaculans 568, complete genomeprotein of unknown function DUF8770894
NC_013956:4579759:4598159459815945997061548Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein0886
NC_010067:2529750:2556798255679825583391542Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0883
NC_020181:969599:9875689875689891091542Enterobacter aerogenes EA1509E, complete genomeUncharacterized protein ImpC0875
NC_015663:4447984:4447984444798444495191536Enterobacter aerogenes KCTC 2190 chromosome, complete genometype VI secretion protein, EvpB/VC_A0108 family0873
NC_016612:5600177:5620685562068556222351551Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein0868
NC_016845:2306744:2326771232677123283151545Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,EvpB/family type VI secretion protein0860
NC_010501:3575726:3601556360155636030941539Pseudomonas putida W619, complete genometype VI secretion protein, EvpB/VC_A0108 family0860
NC_012962:3568046:3599289359928936008211533Photorhabdus asymbiotica, complete genomehypothetical protein0846
NC_016590:1183470:1200236120023612017891554Burkholderia sp. YI23 chromosome 3, complete sequencetype VI secretion protein, EvpB0822
NC_010552:592154:5972005972005987501551Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype VI secretion protein, EvpB/VC_A0108 family0810
NC_007348:2011957:2016287201628720178341548Ralstonia eutropha JMP134 chromosome 2, complete sequenceProtein of unknown function DUF8770810
NC_014118:1171411:1184595118459511861661572Burkholderia sp. CCGE1002 chromosome chromosome 2, completetype VI secretion protein, EvpB/VC_A0108 family0806
NC_012721:1395417:1412309141230914138411533Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein0805
NC_012721:240000:2459022459022474341533Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein0805
NC_009255:1250939:1256594125659412580151422Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein0647
NC_009255:2044291:2059004205900420604251422Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein0645
NC_007517:306508:3104583104583119361479Geobacter metallireducens GS-15, complete genomeprotein of unknown function DUF8771e-123443
NC_011274:1129686:1131957113195711334291473Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-118425
NC_011149:1110642:1111055111105511125271473Salmonella enterica subsp. enterica serovar Agona str. SL483,type VI secretion protein, EvpB/family7e-118424
CU928160:256932:2569322569322584071476Escherichia coli IAI1 chromosome, complete genomeconserved hypothetical protein1e-117423
NC_011741:256932:2569322569322584071476Escherichia coli IAI1 chromosome, complete genomehypothetical protein1e-117423
NC_009656:3733913:3742921374292137443961476Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein2e-117422
NC_008570:1986466:1999252199925220007241473Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein9e-116417
NC_012913:1832500:1838456183845618399401485Aggregatibacter aphrophilus NJ8700, complete genometype VI secretion protein, EvpB/family2e-115416
NC_013592:1424560:1439052143905214405301479Dickeya dadantii Ech586, complete genometype VI secretion protein, EvpB/VC_A0108 family2e-115416
NC_013421:1143500:1158353115835311598311479Pectobacterium wasabiae WPP163, complete genometype VI secretion protein, EvpB/VC_A0108 family3e-114412
NC_004578:2797493:2808195280819528096701476Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein3e-114412
NC_015968:4117835:4152858415285841543361479Enterobacter asburiae LF7a chromosome, complete genomeEvpB family type VI secretion protein1e-113410
NC_014355:1865003:1889990188999018914831494Candidatus Nitrospira defluvii, complete genomehypothetical protein1e-113410
NC_013008:261226:2612262612262626171392Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-112407
NC_011353:261220:2612202612202626111392Escherichia coli O157:H7 str. EC4115 chromosome, complete genome1e-112407
NC_002655:261236:2612362612362626271392Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-112407
NC_002695:261235:2612352612352626261392Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-112407
NC_007946:258747:2610242610242625081485Escherichia coli UTI89, complete genomehypothetical protein2e-112406
NC_008563:258725:2610022610022624861485Escherichia coli APEC O1, complete genomehypothetical protein2e-112406
NC_008253:257059:2603492603492618331485Escherichia coli 536, complete genomehypothetical protein2e-112406
NC_011742:258746:2610232610232625071485Escherichia coli S88 chromosome, complete genomehypothetical protein2e-112406
NC_011751:256830:2591072591072605911485Escherichia coli UMN026 chromosome, complete genomehypothetical protein4e-112405
NC_011745:258727:2610042610042624881485Escherichia coli ED1a chromosome, complete genomehypothetical protein6e-112404
NC_014310:785220:8063488063488078381491Ralstonia solanacearum PSI07 megaplasmid, complete sequencehypothetical protein4e-111402
NC_010322:3084834:3101078310107831025801503Pseudomonas putida GB-1 chromosome, complete genomeEvpB family type VI secretion protein7e-109394
NC_009802:114749:1382351382351396831449Campylobacter concisus 13826, complete genometype VI secretion protein, EvpB/family7e-109394
NC_012779:2619871:2632264263226426337511488Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-108392
NC_007510:409843:4253624253624268521491Burkholderia sp. 383 chromosome 1, complete sequenceprotein of unknown function DUF8777e-108391
NC_006350:3710641:3711217371121737127071491Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein2e-107390
NC_009074:3559211:3560327356032735618171491Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein2e-107390
NC_014323:4619344:4632981463298146344741494Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein2e-107390
NC_002947:3492379:3494708349470834962101503Pseudomonas putida KT2440, complete genomehypothetical protein1e-107390
NC_008390:407315:4263644263644278541491Burkholderia cepacia AMMD chromosome 1, complete sequenceprotein of unknown function DUF8779e-108390
NC_014306:679888:6858536858536873521500Erwinia billingiae Eb661, complete genomeconserved uncharacterized protein1e-106387
NC_016816:1823127:1829125182912518306241500Pantoea ananatis LMG 5342, complete genometype VI secretion system, core protein5e-106385
NC_015381:429940:4505244505244520141491Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein6e-106384
NC_012997:1689583:1708917170891717104131497Teredinibacter turnerae T7901, complete genometype VI secretion protein, EvpB/family3e-104379
NC_018868:973379:9796119796119810981488Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genometype VI secretion protein, EvpB/family3e-104379
NC_007435:1914375:1956768195676819582671500Burkholderia pseudomallei 1710b chromosome II, complete sequencehypothetical protein7e-104378
NC_006351:101500:1183021183021198011500Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein7e-104378
NC_010805:1576735:1598803159880316002961494Burkholderia multivorans ATCC 17616 chromosome 2, completehypothetical protein3e-103375
NC_010086:871723:8750088750088765011494Burkholderia multivorans ATCC 17616 chromosome 2, completetype VI secretion protein, EvpB/VC_A0108 family3e-103375
NC_008313:691692:6950296950296965221494Ralstonia eutropha H16 chromosome 1, complete sequencehypothetical protein3e-103375
NC_010159:3120642:313911731391173140106990Yersinia pestis Angola, complete genomepossibly conserved membrane protein7e-103374
NC_020064:2921809:2927930292793029294351506Serratia marcescens FGI94, complete genometype VI secretion protein, EvpB/VC_A0108 family1e-102374
NC_007511:1094050:1097335109733510988281494Burkholderia sp. 383 chromosome 2, complete sequenceprotein of unknown function DUF8776e-102371
NC_013282:1256769:1275116127511612766181503Cronobacter turicensis, complete genomehypothetical protein1e-101370
NC_004088:4073698:4082807408280740843181512Yersinia pestis KIM, complete genomehypothetical protein2e-100366
NC_006155:751235:7607847607847622951512Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-100366
NC_010465:3919572:3926229392622939277401512Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein, EvpB/VC_A0108 family2e-100366
NC_008149:442168:4534884534884549991512Yersinia pestis Nepal516, complete genomehypothetical protein2e-100366
NC_003143:524755:5342855342855357961512Yersinia pestis CO92, complete genomehypothetical protein2e-100366
NC_010634:732016:7425447425447440551512Yersinia pseudotuberculosis PB1/+, complete genomeEvpB family type VI secretion protein2e-100366
NC_005810:4183297:4189954418995441914651512Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein2e-100366
NC_009381:3558018:3564675356467535661861512Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein2e-100366
NC_017154:520400:5299305299305314411512Yersinia pestis D106004 chromosome, complete genomehypothetical protein2e-100366
NC_015963:117178:1377581377581392391482Enterobacter asburiae LF7a plasmid pENTAS01, complete sequenceEvpB family type VI secretion protein2e-100366
NC_014029:576459:5877885877885892901503Yersinia pestis Z176003 chromosome, complete genomehypothetical protein2e-100366
NC_009708:3862044:3871153387115338726551503Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-100366
NC_010159:770172:7768217768217783231503Yersinia pestis Angola, complete genomehypothetical protein2e-100366
NC_017265:3861259:3871768387176838732791512Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein2e-100366
NC_017168:561402:5680595680595695701512Yersinia pestis A1122 chromosome, complete genomehypothetical protein2e-100366
NC_017160:520799:5321195321195336301512Yersinia pestis D182038 chromosome, complete genomehypothetical protein2e-100366
NC_013855:196778:1967781967781982471470Azospirillum sp. B510 plasmid pAB510a, complete sequencehypothetical protein5e-100365
NC_009778:1956225:197762919776291978411783Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-100364
NC_010465:2820500:285503928550392855605567Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein2e-99363
NC_020211:3398281:3407367340736734088931527Serratia marcescens WW4, complete genomehypothetical protein7e-99361
NC_012721:137046:1577751577751592771503Burkholderia glumae BGR1 chromosome 2, complete genomeHypothetical protein superfamily protein3e-98359
NC_008391:271254:2745562745562760491494Burkholderia cepacia AMMD chromosome 2, complete sequenceprotein of unknown function DUF8777e-98358
CU928145:3360967:3385641338564133871191479Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein4e-97355
NC_011748:3360967:3385641338564133871191479Escherichia coli 55989, complete genomehypothetical protein4e-97355
NC_008314:2744553:2747374274737427488851512Ralstonia eutropha H16 chromosome 2, complete sequencehypothetical protein3e-92339
NC_014623:2216825:2237887223788722393801494Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein8e-91334
NC_012997:1689583:1706985170698517084211437Teredinibacter turnerae T7901, complete genometype VI secretion protein, EvpB/family4e-75282
NC_018868:973379:9811629811629826731512Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genometype VI secretion protein, EvpB/family2e-69263
NC_007880:1079634:1098059109805910995791521Francisella tularensis subsp. holarctica, complete genomeintracellular growth locus, subunit B1e-67258
NC_008369:1083598:1101998110199811035421545Francisella tularensis subsp. holarctica OSU18, complete genomeintracellular growth locus B protein9e-68258
NC_016822:267758:270617270617271507891Shigella sonnei 53G, complete genomehypothetical protein2e-62240
NC_016822:267758:270032270032270580549Shigella sonnei 53G, complete genometype VI secretion protein EvpB2e-40167
NC_014355:1865003:1922707192270719242781572Candidatus Nitrospira defluvii, complete genomehypothetical protein4e-39162
NC_008150:4601202:461252246125224613187666Yersinia pestis Antiqua, complete genomehypothetical protein2e-27124
NC_010465:2820500:285580428558042855923120Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein3e-1480.5