Pre_GI: BLASTP Hits

Some Help

Query: NC_017265:2586729:2607499 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 2607499, End: 2608185, Length: 687

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:809943:826279826279826965687Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein8e-131465
NC_004088:3689000:371038437103843711070687Yersinia pestis KIM, complete genomehypothetical protein8e-131465
NC_003143:1630000:165984816598481660534687Yersinia pestis CO92, complete genomehypothetical protein8e-131465
NC_004088:2966331:298709829870982987784687Yersinia pestis KIM, complete genomehypothetical protein8e-131465
NC_008149:3556999:357826135782613578947687Yersinia pestis Nepal516, complete genomemembrane protein8e-131465
NC_010159:172469:183971183971184657687Yersinia pestis Angola, complete genomehypothetical protein8e-131465
NC_008150:317903:335178335178335864687Yersinia pestis Antiqua, complete genomehypothetical protein8e-131465
NC_005810:3917254:393628139362813936967687Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein8e-131465
NC_003143:1059580:108227710822771082963687Yersinia pestis CO92, complete genomehypothetical protein8e-131465
NC_008149:2802392:282316228231622823848687Yersinia pestis Nepal516, complete genomemembrane protein8e-131465
NC_008150:844727:873712873712874398687Yersinia pestis Antiqua, complete genomehypothetical protein8e-131465
NC_005810:1467772:148875314887531489439687Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein8e-131465
NC_017168:3286:223112231122997687Yersinia pestis A1122 chromosome, complete genomehypothetical protein8e-131465
NC_017160:905783:922124922124922810687Yersinia pestis D182038 chromosome, complete genomehypothetical protein8e-131465
NC_017154:902739:920015920015920701687Yersinia pestis D106004 chromosome, complete genomehypothetical protein8e-131465
NC_017154:1644404:167143116714311672117687Yersinia pestis D106004 chromosome, complete genomehypothetical protein8e-131465
NC_014029:961522:977869977869978555687Yersinia pestis Z176003 chromosome, complete genomehypothetical protein8e-131465
NC_014029:1702338:172935817293581730044687Yersinia pestis Z176003 chromosome, complete genomehypothetical protein8e-131465
NC_009381:588137:604467604467605153687Yersinia pestis Pestoides F chromosome, complete genomemembrane protein8e-131465
NC_009381:1682000:170443117044311705117687Yersinia pestis Pestoides F chromosome, complete genomemembrane protein8e-131465
NC_017168:3977767:399853739985373999223687Yersinia pestis A1122 chromosome, complete genomehypothetical protein8e-131465
NC_009708:874770:891097891097891783687Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-129462
NC_010634:1755548:177946817794681780154687Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein2e-129461
NC_006155:1756000:177924617792461779932687Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein2e-129461
NC_006155:3805640:382836638283663829052687Yersinia pseudotuberculosis IP 32953, complete genomePossibly conserved membrane protein6e-129459
NC_010634:3720214:374144737414473742133687Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein6e-129459
NC_009708:2788855:284077228407722841458687Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein7e-128456
NC_010465:893921:910238910238910924687Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein2e-127454
NC_009708:915814:936427936427937113687Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein7e-111399
NC_017160:1628500:165192616519261652534609Yersinia pestis D182038 chromosome, complete genomemembrane protein5e-107386
NC_010159:3120642:313911731391173140106990Yersinia pestis Angola, complete genomepossibly conserved membrane protein5e-80296
NC_013956:4579759:459611545961154596804690Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein5e-65247
NC_009832:1946401:196238219623821963071690Serratia proteamaculans 568, complete genomehypothetical protein7e-65246
NC_014121:1822895:182289518228951823587693Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative OmpA-family membrane protein2e-64245
NC_012731:2302974:230228823022882302977690Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-58225
NC_009648:1487692:148700614870061487695690Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein2e-58225
NC_016845:2306744:232966523296652330354690Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein2e-58225
NC_008563:3119284:312061831206183121283666Escherichia coli APEC O1, complete genomehypothetical protein8e-53206
NC_011283:942594:959882959882960547666Klebsiella pneumoniae 342 chromosome, complete genometype IV/VI secretion system protein, DotU family5e-47187
NC_012962:3568046:359726535972653597930666Photorhabdus asymbiotica, complete genomemembrane protein1e-46186
NC_010501:3575726:359950035995003600168669Pseudomonas putida W619, complete genomehypothetical protein3e-38158
NC_010067:2529750:255475025547502555439690Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-36152
NC_016612:5600177:561867956186795619317639Klebsiella oxytoca KCTC 1686 chromosome, complete genometype VI secretion system protein ImpK3e-34145
NC_016845:3238507:326168232616823262335654Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,membrane protein1e-31136
NC_011283:2103500:210496821049682105621654Klebsiella pneumoniae 342 chromosome, complete genometype IV/VI secretion system protein, DotU family2e-31135
NC_012731:3193880:321288232128823213535654Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein3e-31135
NC_005126:3812054:386016238601623860554393Photorhabdus luminescens subsp. laumondii TTO1, complete genome4e-28124
NC_012721:1395417:141624114162411416972732Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein6e-1994.4
NC_007348:2011957:201418120141812014828648Ralstonia eutropha JMP134 chromosome 2, complete sequencehypothetical protein1e-1893.2
NC_016590:1183470:120417612041761204904729Burkholderia sp. YI23 chromosome 3, complete sequencehypothetical protein6e-1890.9
NC_014118:1171411:118871411887141189445732Burkholderia sp. CCGE1002 chromosome chromosome 2, completetype IV / VI secretion system protein, DotU family1e-1789.7
NC_010552:592154:593929593929594603675Burkholderia ambifaria MC40-6 chromosome 2, complete sequencehypothetical protein1e-1480.5
NC_009255:1250939:125453212545321255194663Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein2e-1065.9
NC_009255:2044291:206182520618252062487663Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein3e-1065.1
NC_005126:349658:391509391509392279771Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-0858.9
NC_012721:137046:154493154493155251759Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein4e-0858.5
NC_005966:2653945:265532426553242656127804Acinetobacter sp. ADP1, complete genomehypothetical protein4e-0858.5
NC_008570:1986466:200714520071452007855711Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein1e-0757
NC_005773:106000:148075148075148788714Pseudomonas syringae pv. phaseolicola 1448A, complete genomehypothetical protein7e-0754.3
NC_007435:1914375:195344919534491954126678Burkholderia pseudomallei 1710b chromosome II, complete sequencehypothetical protein7e-0754.3
NC_006351:101500:115016115016115672657Burkholderia pseudomallei K96243 chromosome 2, complete sequencehypothetical protein8e-0753.9
NC_012962:293976:311260311260312030771Photorhabdus asymbiotica, complete genomehypothetical protein1e-0653.1
NC_014310:785220:802006802006802797792Ralstonia solanacearum PSI07 megaplasmid, complete sequencesecretion system protein2e-0653.1