Pre_GI: BLASTP Hits

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Query: NC_017265:2586729:2586729 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 2586729, End: 2590151, Length: 3423

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010804:324396:3470683470683501543087Burkholderia multivorans ATCC 17616 chromosome 1, complete2e-31138
NC_009778:1956225:1976281197628119776511371Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-137489
NC_007510:409843:4438784438784478253948Burkholderia sp. 383 chromosome 1, complete sequencehypothetical protein1e-30136
NC_014355:1865003:1882727188272718863563630Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-1895.5
NC_018000:2964500:2989499298949929930293531Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein5e-0964.3
NC_017168:3977767:3977767397776739811893423Yersinia pestis A1122 chromosome, complete genomehypothetical protein02138
NC_013956:4579759:4579759457975945832923534Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein01289
NC_005126:3812054:3830821383082138341713351Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein01140
NC_009648:2465613:2467510246751024709203411Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein0830
NC_012721:1395417:1398827139882714023513525Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein4e-153543
NC_005126:349658:3824313824313859763546Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-1068.2
NC_004088:2966331:2966331296633129697533423Yersinia pestis KIM, complete genomehypothetical protein02138
NC_008563:3119284:3133547313354731368853339Escherichia coli APEC O1, complete genomehypothetical protein0929
NC_012731:3193880:3195777319577731991933417Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein0826
NC_005126:349658:3568883568883604333546Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein3e-1068.6
NC_004917:241053:2432372432372467913555Helicobacter hepaticus ATCC 51449, complete genomehypothetical protein2e-0862.8
NC_020126:3979792:3998997399899740028813885Myxococcus stipitatus DSM 14675, complete genomehypothetical protein7e-0653.9
NC_012731:2302974:2318423231842323219263504Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein01249
NC_005126:3812054:3843641384364138470123372Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein01134
NC_005126:4919689:4927191492719149305503360Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein01036
NC_009648:3476000:3487423348742334905003078Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein0934
NC_013282:2026083:2050468205046820537793312Cronobacter turicensis, complete genomehypothetical protein0872
NC_016845:3238507:3240404324040432438143411Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein0827
NC_004605:1092476:1095070109507010985883519Vibrio parahaemolyticus RIMD 2210633 chromosome II, completehypothetical protein1e-1482.8
NC_012962:293976:3021943021943057393546Photorhabdus asymbiotica, complete genomehypothetical protein1e-0863.2
NC_009381:1682000:1683661168366116870833423Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein02138
NC_009708:2788855:2820654282065428240763423Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein02122
NC_009648:1487692:1505225150522515085993375Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein01259
NC_005126:3812054:3819697381969738230683372Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein01138
NC_012962:4427000:4437011443701144403073297Photorhabdus asymbiotica, complete genomehypothetical protein01060
NC_010067:2529750:2532006253200625353773372Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein0884
NC_016612:5600177:5603309560330956067283420Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein0828
NC_016626:400080:4228984228984264283531Burkholderia sp. YI23 plasmid byi_1p, complete sequencehypothetical protein2e-169597
NC_012721:240000:2571702571702606913522Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein1e-151537
NC_011740:1991941:2010341201034120138623522Escherichia fergusonii ATCC 35469, complete genomeIcmF-like protein7e-0757
NC_010465:2820500:2847223284722328506453423Yersinia pseudotuberculosis YPIII, complete genomeImcF domain protein02127
NC_015062:130359:1432731432731466893417Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequenceImcF domain protein01013
NC_010501:3575726:3580163358016335835073345Pseudomonas putida W619, complete genomeImcF domain protein0924
NC_014118:1171411:1172998117299811765823585Burkholderia sp. CCGE1002 chromosome chromosome 2, completeImcF domain protein3e-149530
NC_014837:3766426:3791881379188137952373357Pantoea sp. At-9b chromosome, complete genomeImcF domain-containing protein01141
NC_017060:125480:1401031401031435193417Rahnella aquatilis HX2 plasmid PRA1, complete sequenceImcF domain-containing protein01013
NC_009436:3117661:3154619315461931579033285Enterobacter sp. 638, complete genomeImcF domain-containing protein0861
NC_014539:3619511:3622840362284036263163477Burkholderia sp. CCGE1003 chromosome 1, complete sequenceImcF domain-containing protein7e-155548
NC_009255:1250939:1271735127173512752893555Burkholderia vietnamiensis G4 chromosome 2, complete sequenceImcF domain-containing protein2e-144514
NC_011283:942594:9464689464689498033336Klebsiella pneumoniae 342 chromosome, complete genomeImcF domain-containing protein0940
NC_009255:2044291:2047201204720120507283528Burkholderia vietnamiensis G4 chromosome 2, complete sequenceImcF domain-containing protein2e-144514
NC_008570:2014151:2014151201415120176363486Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeImcF family protein5e-0654.3
NC_005773:106000:1441241441241480443921Pseudomonas syringae pv. phaseolicola 1448A, complete genomeImcF-related family3e-35151
NC_011283:2103500:2116315211631521192812967Klebsiella pneumoniae 342 chromosome, complete genomeImcF-related family protein0808
NC_012721:710887:7242107242107277733564Burkholderia glumae BGR1 chromosome 2, complete genomeImcF-related protein2e-144514
NC_007347:1:2498224982285963615Ralstonia eutropha JMP134 chromosome 1, complete sequenceImcF-related:Protein of unknown function DUF12151e-145518
NC_007005:5882205:5882205588220558861373933Pseudomonas syringae pv. syringae B728a, complete genomeImcF-related:Protein of unknown function DUF12152e-35152
NC_007348:2011957:2025768202576820292383471Ralstonia eutropha JMP134 chromosome 2, complete sequenceImcF-related:Protein of unknown function DUF12154e-150533
NC_008149:2802392:2802392280239228058143423Yersinia pestis Nepal516, complete genomemembrane protein02138
NC_003296:941920:9611259611259650663942Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSMEMBRANE PROTEIN4e-24114
NC_010552:592154:6071386071386109563819Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceprotein of unknown function DUF12153e-155550
NC_014306:4376012:4390795439079543938933099Erwinia billingiae Eb661, complete genomePutative Type VI secretion system, ImcF domain-containing protein6e-134479
NC_014310:811977:8415608415608454893930Ralstonia solanacearum PSI07 megaplasmid, complete sequencesecretion system protein3e-23111
NC_012962:2639500:2648526264852626518913366Photorhabdus asymbiotica, complete genomesimilar to putative membrane protein of y. pestis01105
NC_012962:3568046:3578063357806335814103348Photorhabdus asymbiotica, complete genomesimilar to putative membrane protein of y. pestis01107
NC_014323:816027:8334198334198372943876Herbaspirillum seropedicae SmR1 chromosome, complete genometransmembrane protein1e-34149
NC_014323:4619344:4619344461934446231443801Herbaspirillum seropedicae SmR1 chromosome, complete genometransmembrane protein7e-34146
NC_010084:3173757:3173757317375731777043948Burkholderia multivorans ATCC 17616 chromosome 1, completetype VI secretion protein IcmF3e-31138
NC_012913:1832500:1849033184903318525303498Aggregatibacter aphrophilus NJ8700, complete genometype VI secretion protein IcmF7e-0860.5
NC_014931:6031645:6031645603164560354903846Variovorax paradoxus EPS chromosome, complete genometype VI secretion protein IcmF6e-28127
NC_014121:1822895:1834869183486918383423474Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein ImpL01328
NC_016612:4823529:4823529482352948269993471Klebsiella oxytoca KCTC 1686 chromosome, complete genometype VI secretion system protein ImpL01342