Pre_GI: BLASTP Hits

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Query: NC_017265:2306500:2316939 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 2316939, End: 2317358, Length: 420

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:3535786:354099635409963541415420Yersinia pestis A1122 chromosome, complete genomehypothetical protein4e-58222
NC_003143:2101902:211959821195982120044447Yersinia pestis CO92, complete genomehypothetical protein6e-58222
NC_004088:2691565:269674826967482697194447Yersinia pestis KIM, complete genometransposase6e-58222
NC_005810:1663672:166919316691931669639447Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein6e-58222
NC_010634:2124185:214026321402632140682420Yersinia pseudotuberculosis PB1/+, complete genometransposase IS3/IS911 family protein4e-58222
NC_008149:2517538:253192025319202532339420Yersinia pestis Nepal516, complete genomehypothetical protein4e-58222
NC_006155:2208686:222393922239392224358420Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein4e-58222
NC_009381:1414985:141617714161771416596420Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein4e-58222
NC_014029:2388500:239001123900112390430420Yersinia pestis Z176003 chromosome, complete genomehypothetical protein4e-58222
NC_017160:2414000:241831724183172418736420Yersinia pestis D182038 chromosome, complete genomehypothetical protein4e-58222
NC_012912:3853377:388393338839333884415483Dickeya zeae Ech1591, complete genometransposase IS3/IS911 family protein1e-51201
NC_012912:3853377:388608638860863886568483Dickeya zeae Ech1591, complete genometransposase IS3/IS911 family protein2e-43174
NC_012912:3853377:386182438618243862327504Dickeya zeae Ech1591, complete genometransposase IS3/IS911 family protein3e-43173
NC_014228:1712339:172665817266581726969312Xenorhabdus nematophila ATCC 19061, complete genometransposase (fragment)2e-35147
NC_009784:2129069:214547521454752145912438Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein5e-23106
NC_007954:2440000:245381824538182454318501Shewanella denitrificans OS217, complete genomehypothetical protein2e-2097.4
NC_019940:3341794:335278433527843353281498Thioflavicoccus mobilis 8321 chromosome, complete genometransposase4e-2096.7
NC_019940:2546500:256393225639322564429498Thioflavicoccus mobilis 8321 chromosome, complete genometransposase6e-2096.3
NC_019940:1540434:155181115518111552308498Thioflavicoccus mobilis 8321 chromosome, complete genometransposase6e-2096.3
NC_019940:2485000:249543524954352495932498Thioflavicoccus mobilis 8321 chromosome, complete genometransposase6e-2096.3
NC_019940:389979:404741404741405238498Thioflavicoccus mobilis 8321 chromosome, complete genometransposase6e-2096.3
NC_019940:389979:403984403984404481498Thioflavicoccus mobilis 8321 chromosome, complete genometransposase6e-2096.3
NC_019940:1:206972069721194498Thioflavicoccus mobilis 8321 chromosome, complete genometransposase6e-2096.3
NC_019940:2432689:244162524416252442122498Thioflavicoccus mobilis 8321 chromosome, complete genometransposase6e-2096.3
NC_019940:3863124:387119938711993871696498Thioflavicoccus mobilis 8321 chromosome, complete genometransposase6e-2096.3
NC_019940:1837863:184625718462571846697441Thioflavicoccus mobilis 8321 chromosome, complete genometransposase7e-2095.9
NC_011830:4722607:472371947237194724216498Desulfitobacterium hafniense DCB-2, complete genometransposase IS3/IS911 family protein2e-1994.4
NC_010524:4644587:465561346556134656104492Leptothrix cholodnii SP-6, complete genometransposase IS3/IS911 family protein2e-1994
NC_010524:3445641:345703734570373457528492Leptothrix cholodnii SP-6, complete genometransposase IS3/IS911 family protein3e-1994
NC_011206:2019577:202618020261802026680501Acidithiobacillus ferrooxidans ATCC 53993, complete genometransposase IS3/IS911 family protein4e-1993.2
NC_011761:2131911:214069321406932141148456Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeISAfe5, transposase orfA5e-1992.8
NC_010170:4800000:485840548584054858896492Bordetella petrii, complete genomeputative transposase4e-1890.1
NC_010170:1152131:116778911677891168280492Bordetella petrii, complete genomeputative transposase4e-1890.1
NC_010170:4463000:449531444953144495805492Bordetella petrii, complete genomeputative transposase4e-1890.1
NC_010170:1152131:117620311762031176694492Bordetella petrii, complete genomeputative transposase4e-1890.1
NC_010170:209514:236003236003236494492Bordetella petrii, complete genomeputative transposase4e-1890.1
NC_008340:1733735:174910317491031749591489Alkalilimnicola ehrlichei MLHE-1, complete genometransposase IS3/IS911 family protein1e-1788.2
NC_010337:803748:817131817131817643513Heliobacterium modesticaldum Ice1, complete genometransposase, putative4e-1786.7
NC_010337:803748:821777821777822289513Heliobacterium modesticaldum Ice1, complete genometransposase, putative4e-1786.7
NC_016613:2103792:210504721050472105349303Vibrio sp. EJY3 chromosome 1, complete sequencehypothetical protein3e-1684
NC_009428:725871:743435743435743935501Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomehypothetical protein5e-1682.8
NC_009052:144619:147869147869148369501Shewanella baltica OS155, complete genomehypothetical protein3e-1580.5
NC_009052:5089963:509156950915695092069501Shewanella baltica OS155, complete genomehypothetical protein3e-1580.5
NC_009483:4434375:446263144626314463155525Geobacter uraniireducens Rf4 chromosome, complete genometransposase IS3/IS911 family protein7e-1372.4
NC_009483:1779601:179439317943931794917525Geobacter uraniireducens Rf4 chromosome, complete genometransposase IS3/IS911 family protein7e-1372.4
NC_013223:448343:4560974560974629526856Desulfohalobium retbaense DSM 5692, complete genome4e-1270.1
NC_009349:78000:794967949679945450Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completetransposase2e-1167.8
NC_009348:1347500:135783713578371358286450Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase2e-1167.8
NC_009348:47974:598625986260311450Aeromonas salmonicida subsp. salmonicida A449, complete genometransposase2e-1167.8
NC_009349:78000:780487804810171623669Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete3e-1167
NC_020908:2466446:248352324835232483867345Octadecabacter arcticus 238, complete genomeputative IS3 family mobile element-associated protein2e-1064.7
NC_013223:448343:461071461071461553483Desulfohalobium retbaense DSM 5692, complete genomeputative transposase5e-1063.2
NC_020908:4550414:455425645542564554582327Octadecabacter arcticus 238, complete genomeputative IS3 family mobile element-associated protein4e-0960.1
NC_015740:2998500:301133830113383011685348Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein5e-0959.7
NC_006371:1848487:186274618627461863267522Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical transposase5e-0959.7
NC_013223:724394:749035749035749415381Desulfohalobium retbaense DSM 5692, complete genome1e-0858.5
NC_005139:518760:534289534289534801513Vibrio vulnificus YJ016 chromosome I, complete sequencehypothetical protein3e-0857.4
NC_015572:2713599:271568727156872716187501Methylomonas methanica MC09 chromosome, complete genomeputative transposase9e-0855.5
NC_015572:1421782:143399114339911434491501Methylomonas methanica MC09 chromosome, complete genomeputative transposase2e-0754.7
NC_015572:4209000:421101542110154211515501Methylomonas methanica MC09 chromosome, complete genomeputative transposase2e-0754.7
NC_015572:1252000:125219812521981252698501Methylomonas methanica MC09 chromosome, complete genomeputative transposase2e-0754.7
NC_020911:2998000:302264730226473023132486Octadecabacter antarcticus 307, complete genomehypothetical protein1e-0652.4
NC_010162:8760128:877344687734468773907462Sorangium cellulosum 'So ce 56', complete genometransposase1e-0651.6
NC_006513:1695487:170271117027111703124414Azoarcus sp. EbN1, complete genometransposition helper protein6e-0649.7
NC_010524:3302398:330704933070493307522474Leptothrix cholodnii SP-6, complete genometransposition helper protein6e-0649.7