Pre_GI: BLASTP Hits

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Query: NC_017265:1000342:1017416 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 1017416, End: 1017760, Length: 345

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017168:199381:215328215328215672345Yersinia pestis A1122 chromosome, complete genomegeneral secretion pathway protein I6e-60228
NC_003143:875367:889602889602889946345Yersinia pestis CO92, complete genomegeneral secretion pathway protein I6e-60228
NC_008150:513783:530854530854531198345Yersinia pestis Antiqua, complete genomegeneral secretion pathway protein I6e-60228
NC_005810:3142384:315946131594613159805345Yersinia pestis biovar Microtus str. 91001, complete genomegeneral secretion pathway protein I6e-60228
NC_008149:3373229:338746433874643387808345Yersinia pestis Nepal516, complete genomegeneral secretion pathway protein I6e-60228
NC_009708:1131500:114746911474691147813345Yersinia pseudotuberculosis IP 31758 chromosome, complete genomegeneral secretion pathway protein I7e-56215
NC_006155:3596120:361036736103673610711345Yersinia pseudotuberculosis IP 32953, complete genomeGeneral secretion pathway protein I2e-55214
NC_009381:775357:791348791348791647300Yersinia pestis Pestoides F chromosome, complete genomegeneral secretion pathway protein I4e-51199
NC_010465:1118147:113598111359811136271291Yersinia pseudotuberculosis YPIII, complete genometype II secretion system protein I/J1e-45181
NC_010634:3509880:352412735241273524417291Yersinia pseudotuberculosis PB1/+, complete genometype II secretion system protein I/J3e-45180
NC_010159:3448490:346376534637653464004240Yersinia pestis Angola, complete genomegeneral secretion pathway protein I3e-40163
NC_008800:3642679:365765836576583658020363Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,general secretion pathway protein I8e-22102
NC_015224:1067390:108476010847601085044285Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,general secretion pathway protein I2e-1684.7
NC_011663:180889:183173183173183541369Shewanella baltica OS223 chromosome, complete genomegeneral secretion pathway protein I9e-1165.5
NC_011745:3511600:353004035300403530411372Escherichia coli ED1a chromosome, complete genomeputative GspI-like type II secretion protein3e-1063.9
NC_020064:3998715:405514340551434055511369Serratia marcescens FGI94, complete genomegeneral secretion pathway protein I6e-1062.8
NC_016612:2902628:294043029404302940795366Klebsiella oxytoca KCTC 1686 chromosome, complete genomegeneral secretion pathway protein I2e-0961.6
NC_008253:3161311:320066232006623201033372Escherichia coli 536, complete genomehypothetical type II secretion protein GspI2e-0651.2
NC_011751:3530954:355566735556673556038372Escherichia coli UMN026 chromosome, complete genomeputative type II secretion protein4e-0650.4
NC_011750:3584000:360356136035613603932372Escherichia coli IAI39 chromosome, complete genomeputative GspI-like type II secretion protein3e-0650.4
NC_012912:3749156:376466137646613765035375Dickeya zeae Ech1591, complete genometype II secretion system protein I/J3e-0650.4
NC_012967:3012317:303281130328113033182372Escherichia coli B str. REL606 chromosome, complete genometype II secretion protein4e-0650.1
NC_016818:362548:377591377591377980390Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completegeneral secretion pathway protein I4e-0650.1
NC_013364:3701895:376292837629283763299372Escherichia coli O111:H- str. 11128, complete genomeputative type II secretion protein GspI5e-0649.7