Pre_GI: BLASTP Hits

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Query: NC_017259:480656:492747 Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,

Start: 492747, End: 493088, Length: 342

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004061:498483:514996514996515322327Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomecytochrome O ubiquinol oxidase D2e-1890.9
NC_017253:509494:514773514773515090318Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,cytochrome O ubiquinol oxidase subunit IV2e-1580.9
NC_002528:505951:513872513872514189318Buchnera aphidicola str. APS (Acyrthosiphon pisum), completecytochrome O ubiquinol oxidase subunit IV4e-1580.1
NC_015723:1047418:105118610511861051611426Cupriavidus necator N-1 chromosome 2, complete sequencecytochrome o ubiquinol oxidase protein CyoD1e-1375.1
NC_010943:1379707:139737813973781397719342Stenotrophomonas maltophilia K279a, complete genomeputative transmembrane quinol oxidase subunit 42e-1374.3
NC_012779:2127542:213816321381632138501339Edwardsiella ictaluri 93-146, complete genomecytochrome o ubiquinol oxidase subunit IV, putative4e-1373.6
NC_007508:1446526:146796114679611468296336Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomecytochrome O ubiquinol oxidase subunit IV1e-1272
NC_009654:91096:103477103477103800324Marinomonas sp. MWYL1, complete genomecytochrome o ubiquinol oxidase subunit IV3e-1167.4
NC_015663:2694373:272537727253772725706330Enterobacter aerogenes KCTC 2190 chromosome, complete genomecytochrome o ubiquinol oxidase subunit IV3e-1167
NC_020181:2714559:271952727195272720402876Enterobacter aerogenes EA1509E, complete genomeCytochrome O ubiquinol oxidase subunit III6e-1166.2
NC_017328:385552:399233399233399562330Shigella flexneri 2002017 chromosome, complete genomeCytochrome O ubiquinol oxidase protein CyoD3e-1063.9
NC_008258:401786:419020419020419349330Shigella flexneri 5 str. 8401, complete genomecytochrome o ubiquinol oxidase subunit IV3e-1063.9
NC_004337:367687:381369381369381698330Shigella flexneri 2a str. 301, complete genomecytochrome o ubiquinol oxidase subunit IV3e-1063.9
NC_004741:366822:380502380502380831330Shigella flexneri 2a str. 2457T, complete genomecytochrome o ubiquinol oxidase subunit IV3e-1063.9
NC_004129:5781413:579222157922215792550330Pseudomonas fluorescens Pf-5, complete genomecytochrome o ubiquinol oxidase, subunit IV6e-1063.2
NC_015422:2326942:234745923474592347833375Alicycliphilus denitrificans K601 chromosome, complete genomecytochrome o ubiquinol oxidase subunit IV7e-0959.3
NC_014910:2045088:206409620640962064470375Alicycliphilus denitrificans BC chromosome, complete genomecytochrome o ubiquinol oxidase subunit iv7e-0959.3
NC_015497:3614817:362285636228563623173318Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomecytochrome o ubiquinol oxidase subunit IV3e-0753.9