Pre_GI: BLASTP Hits

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Query: NC_017259:480656:491870 Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,

Start: 491870, End: 492745, Length: 876

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017253:509494:513879513879514745867Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,protoheme IX farnesyltransferase2e-81302
NC_002528:505951:512987512987513844858Buchnera aphidicola str. APS (Acyrthosiphon pisum), completeprotohaeme IX farnesyltransferase3e-81301
NC_004061:498483:514111514111514965855Buchnera aphidicola str. Sg (Schizaphis graminum), complete genomeprotoheme IX farnesyltransferase5e-64244
NC_020181:2714559:272041427204142721301888Enterobacter aerogenes EA1509E, complete genomeHeme O synthase, protoheme IX farnesyltransferase COX10-CtaB1e-60233
NC_015663:2694373:272447827244782725365888Enterobacter aerogenes KCTC 2190 chromosome, complete genomeprotoheme IX farnesyltransferase1e-60233
NC_004337:367687:380467380467381354888Shigella flexneri 2a str. 301, complete genomeprotoheme IX farnesyltransferase1e-59230
NC_004741:366822:379600379600380487888Shigella flexneri 2a str. 2457T, complete genomeprotoheme IX farnesyltransferase1e-59230
NC_017328:385552:398331398331399221891Shigella flexneri 2002017 chromosome, complete genomeCytochrome o ubiquinol oxidase C subunit1e-59230
NC_012779:2127542:213725521372552138145891Edwardsiella ictaluri 93-146, complete genomeprotoheme IX farnesyltransferase, putative9e-60230
NC_008258:401786:418118418118419008891Shigella flexneri 5 str. 8401, complete genome9e-59227
NC_004129:5781413:579132357913235792210888Pseudomonas fluorescens Pf-5, complete genomeprotoheme IX farnesyltransferase7e-57221
NC_015497:3614817:362195136219513622841891Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeprotoheme IX farnesyltransferase8e-51200
NC_009654:91096:103872103872104762891Marinomonas sp. MWYL1, complete genomeprotoheme IX farnesyltransferase6e-50197
NC_018677:111500:146818146818147672855Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, completeHeme O synthase protoheme IX farnesyltransferase COX10-CtaB6e-47187
NC_017190:1465079:152155415215541522471918Bacillus amyloliquefaciens LL3 chromosome, complete genomecytochrome caa3 oxidase assembly factor2e-31136
NC_016830:81382:943229432295221900Pseudomonas fluorescens F113 chromosome, complete genomeprotein CtaB2e-28126
NC_013161:212941:235136235136236107972Cyanothece sp. PCC 8802, complete genomeprotoheme IX farnesyltransferase4e-27122
NC_011726:213956:234955234955235926972Cyanothece sp. PCC 8801, complete genomeprotoheme IX farnesyltransferase5e-27121
NC_006177:2211458:223331422333142234210897Symbiobacterium thermophilum IAM 14863, complete genomeputative heme O synthase2e-26120
NC_014831:1906691:1922629192262919236481020Thermaerobacter marianensis DSM 12885 chromosome, complete genomeprotoheme IX farnesyltransferase3e-26119
NC_015379:89441:108850108850109749900Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative protoheme IX farnesyltransferase1e-25116
NC_013894:1380564:138139313813931382283891Thermocrinis albus DSM 14484 chromosome, complete genomeprotoheme IX farnesyltransferase2e-25116
NC_014643:2056280:2105364210536421064431080Rothia dentocariosa ATCC 17931 chromosome, complete genomeprotoheme IX farnesyltransferase2e-25116
NC_011884:1029328:104392110439211044895975Cyanothece sp. PCC 7425, complete genomeprotoheme IX farnesyltransferase5e-24111
NC_020133:2886541:289006828900682891042975Mycobacterium liflandii 128FXT, complete genomecytochrome C oxidase assembly factor CtaB4e-23108
NC_015563:3074691:309197030919703092875906Delftia sp. Cs1-4 chromosome, complete genomeprotoheme IX farnesyltransferase6e-23108
NC_012522:7596039:760104176010417602024984Rhodococcus opacus B4, complete genomeputative protoheme IX farnesyltransferase2e-22106
NC_014315:3278386:328155832815583282457900Nitrosococcus watsoni C-113 chromosome, complete genomeprotoheme IX farnesyltransferase1e-21103
NC_007484:3429140:343528634352863436185900Nitrosococcus oceani ATCC 19707, complete genomeProtoheme IX farnesyltransferase1e-21103
NC_014012:207289:219014219014219928915Shewanella violacea DSS12, complete genomeprotoheme IX farnesyltransferase4e-21102
NC_015848:1647523:165833516583351659261927Mycobacterium canettii CIPT 140010059, complete genomeputative cytochrome C oxidase assembly factor CTAB9e-21100
NC_009565:1629780:163962516396251640551927Mycobacterium tuberculosis F11, complete genomecytochrome C oxidase assembly factor ctaB9e-21100
NC_016768:2764000:277422527742252775151927Mycobacterium tuberculosis KZN 4207 chromosome, complete genomecytochrome C oxidase assembly factor ctaB9e-21100
NC_013446:3034486:305666830566683057573906Comamonas testosteroni CNB-2, complete genomeprotoheme IX farnesyltransferase2e-2099.8
NC_006370:166000:1780171780171790481032Photobacterium profundum SS9 chromosome 1, complete sequenceprotoheme IX farnesyltransferase2e-2099.8
NC_004757:1089057:109800210980021098898897Nitrosomonas europaea ATCC 19718, complete genomeprotoheme IX farnesyltransferase3e-2099.4
NC_002945:1621765:163161316316131632539927Mycobacterium bovis AF2122/97, complete genomeprotoheme IX farnesyltransferase3e-2099
NC_005955:427142:443031443031443966936Bartonella quintana str. Toulouse, complete genomeprotoheme IX farnesyltransferase4e-2099
NC_006677:2042387:204238720423872043337951Gluconobacter oxydans 621H, complete genomeprotoheme IX farnesyltransferase4e-2098.6
NC_013521:2193203:221636822163682217252885Sanguibacter keddieii DSM 10542, complete genomeprotoheme IX farnesyltransferase4e-1995.5
NC_017278:48630:5038150381522071827Thermus sp. CCB_US3_UF1 chromosome, complete genomeProtoheme IX farnesyltransferase5e-1995.1
NC_009465:29735:311203112032013894Candidatus Vesicomyosocius okutanii HA, complete genomeprotoheme IX farnesyltransferase6e-1995.1
NC_015731:402280:416575416575417468894Nitrosomonas sp. Is79A3 chromosome, complete genomeProtoheme IX farnesyltransferase4e-1892
NC_015387:1965711:1967458196745819692811824Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeProtoheme IX farnesyltransferase2e-1790.1
NC_015942:1824847:184796518479651848909945Acidithiobacillus ferrivorans SS3 chromosome, complete genomeProtoheme IX farnesyltransferase1e-1687
NC_015703:3444025:345537034553703456245876Runella slithyformis DSM 19594 chromosome, complete genomeProtoheme IX farnesyltransferase5e-1685.1
NC_011206:2685499:272649527264952727439945Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotoheme IX farnesyltransferase6e-1684.7
NC_011761:2785660:282665628266562827600945Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeprotoheme IX farnesyltransferase6e-1684.7
NC_015914:2658845:267112826711282672030903Cyclobacterium marinum DSM 745 chromosome, complete genomeProtoheme IX farnesyltransferase1e-1584
NC_020054:1335699:134823613482361349141906Fibrella aestuarina BUZ 2 drat genomeprotoheme IX farnesyltransferase2e-1583.2
NC_013124:1784117:179765217976521798545894Acidimicrobium ferrooxidans DSM 10331, complete genomeprotoheme IX farnesyltransferase2e-1582.8
NC_015850:169180:191525191525192469945Acidithiobacillus caldus SM-1 chromosome, complete genomeheme O synthase, protoheme IX farnesyltransferase COX10-CtaB5e-1582
NC_002935:1237585:131033913103391311271933Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein1e-1480.9
NC_016800:1243000:131259613125961313543948Corynebacterium diphtheriae BH8 chromosome, complete genomeprotoheme IX farnesyltransferase1e-1480.9
NC_016782:1251796:128402812840281284975948Corynebacterium diphtheriae 241 chromosome, complete genomeprotoheme IX farnesyltransferase9e-1580.9
NC_016783:1274000:130832813083281309275948Corynebacterium diphtheriae INCA 402 chromosome, complete genomeprotoheme IX farnesyltransferase9e-1580.9
NC_016786:1251765:128399712839971284944948Corynebacterium diphtheriae HC01 chromosome, complete genomeprotoheme IX farnesyltransferase9e-1580.9
NC_016802:1256287:128492812849281285875948Corynebacterium diphtheriae HC02 chromosome, complete genomeprotoheme IX farnesyltransferase9e-1580.9
NC_016510:1072709:107839510783951079300906Flavobacterium columnare ATCC 49512 chromosome, complete genomeprotoheme IX farnesyltransferase6e-1478.2
NC_016645:633988:6476246476246489131290Pyrobaculum sp. 1860 chromosome, complete genomeprenyltransferase9e-1477.8
NC_014973:54449:553365533656181846Geobacter sp. M18 chromosome, complete genomeUbiA prenyltransferase2e-1273.2
NC_013730:6901725:691304969130496913927879Spirosoma linguale DSM 74, complete genomeprotoheme IX farnesyltransferase2e-1273.2
NC_014910:3727887:375135437513543752256903Alicycliphilus denitrificans BC chromosome, complete genomeprotoheme ix farnesyltransferase7e-0858.2