Pre_GI: BLASTP Hits

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Query: NC_017259:480656:487019 Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,

Start: 487019, End: 487450, Length: 432

Host Lineage: Buchnera aphidicola; Buchnera; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: It is believed that the Buchnera provide the essential nutrients the host lacks. Besides a nutritional co-dependence, due to a co-existence of millions of years, Buchnera have lost the ability to produce cell surface components such as lipopolysaccharides. This makes for an obligate endosymbiont relationship between host and Buchnera. Buchnera are prokaryotic cells which belong to the gamma-Proteobacteria, closely related to the Enterobacteriaceae family. Phylogenetic studies using 16S rRNA indicate that the symbiotic relationship was established around 200-250 million years ago. Since Buchnera are closely related to Escherichia coli and Haemophilus influenzae, comparative genomic studies can shed light on the evolutionary mechanisms of intracellular endosymbiosis as well as the different underlying molecular basis between organisms with parasitic behavior and symbionts.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002528:505951:508106508106508537432Buchnera aphidicola str. APS (Acyrthosiphon pisum), completetranscription antitermination protein NusB5e-63239
NC_004061:498483:509330509330509758429Buchnera aphidicola str. Sg (Schizaphis graminum), complete genometranscription antitermination protein NusB3e-59226
NC_020181:2714559:275404027540402754459420Enterobacter aerogenes EA1509E, complete genomeTranscription termination protein NusB2e-39160
NC_018691:896464:922490922490922969480Alcanivorax dieselolei B5 chromosome, complete genometranscription antitermination protein NusB8e-29125
NC_014532:3036109:304138330413833041883501Halomonas elongata DSM 2581, complete genometranscription antitermination protein NusB6e-26115
NC_007651:1726472:173153017315301731967438Burkholderia thailandensis E264 chromosome I, complete sequencetranscription antitermination factor NusB1e-21101
NC_012856:737170:738398738398738865468Ralstonia pickettii 12D chromosome 1, complete genomeNusB antitermination factor5e-2199.8
NC_007510:973828:979842979842980279438Burkholderia sp. 383 chromosome 1, complete sequencetranscription antitermination protein NusB8e-2199
NC_010682:701912:701912701912702379468Ralstonia pickettii 12J chromosome 1, complete sequenceNusB antitermination factor7e-2199
NC_012724:829830:852442852442852879438Burkholderia glumae BGR1 chromosome 1, complete genomeNusB antitermination factor4e-2096.7
NC_008340:420126:423528423528424064537Alkalilimnicola ehrlichei MLHE-1, complete genomeNusB antitermination factor1e-1995.1
NC_015731:169989:170468170468170968501Nitrosomonas sp. Is79A3 chromosome, complete genomeNusB antitermination factor7e-1992.4
NC_019940:203718:220653220653221168516Thioflavicoccus mobilis 8321 chromosome, complete genometranscription antitermination factor NusB2e-1891.3
NC_008781:3056407:307431930743193074840522Polaromonas naphthalenivorans CJ2, complete genomeNusB antitermination factor2e-1787.8
NC_018607:805966:816447816447816971525Brachyspira pilosicoli B2904 chromosome, complete genometranscription antitermination protein NusB8e-1785.9
NC_014330:609982:629102629102629626525Brachyspira pilosicoli 95/1000 chromosome, complete genometranscription antitermination protein NusB8e-1785.9
NC_018604:2053585:207551220755122076036525Brachyspira pilosicoli WesB complete genometranscription antitermination protein NusB1e-1684.7
NC_015738:629297:648993648993649520528Eggerthella sp. YY7918, complete genometranscription termination factor8e-1682.4
NC_010520:2061502:207968120796812080106426Clostridium botulinum A3 str. Loch Maree, complete genomeN utilization substance protein B1e-1582
NC_013204:2955500:297178429717842972371588Eggerthella lenta DSM 2243, complete genomeNusB antitermination factor2e-1581.3
NC_017297:2054000:207200520720052072436432Clostridium botulinum F str. 230613 chromosome, complete genomeN utilization substance protein B2e-1580.9
NC_009699:2056500:207190720719072072338432Clostridium botulinum F str. Langeland chromosome, complete genometranscription antitermination protein NusB2e-1580.9
NC_010516:1999500:201488720148872015318432Clostridium botulinum B1 str. Okra, complete genomeN utilization substance protein B2e-1580.9
NC_011060:459615:495793495793496308516Pelodictyon phaeoclathratiforme BU-1, complete genomeNusB antitermination factor2e-1477.4
NC_014219:2491021:249443924944392494843405Bacillus selenitireducens MLS10 chromosome, complete genomeNusB antitermination factor3e-1477.4
NC_014652:1758787:176014817601481760552405Caldicellulosiruptor hydrothermalis 108 chromosome, completenusb antitermination factor2e-1271.2
NC_014972:847099:851362851362851784423Desulfobulbus propionicus DSM 2032 chromosome, complete genomeNusB antitermination factor6e-1269.7
NC_010003:1052997:107106710710671071522456Petrotoga mobilis SJ95, complete genomeNusB antitermination factor3e-1167
NC_013169:1290000:130395113039511304364414Kytococcus sedentarius DSM 20547, complete genomeNusB antitermination factor3e-1063.5
NC_016799:1343020:138201013820101382609600Corynebacterium diphtheriae 31A chromosome, complete genomeN utilization substance protein B9e-1062.4
NC_013410:3358008:337860533786053379045441Fibrobacter succinogenes subsp. succinogenes S85 chromosome,NusB antitermination factor8e-1062.4
NC_016782:1316467:132655813265581327157600Corynebacterium diphtheriae 241 chromosome, complete genomeN utilization substance protein B8e-1062.4
NC_016786:1316436:132652813265281327127600Corynebacterium diphtheriae HC01 chromosome, complete genomeN utilization substance protein B8e-1062.4
NC_016787:1276983:131597613159761316575600Corynebacterium diphtheriae HC03 chromosome, complete genomeN utilization substance protein B8e-1062.4
NC_016790:1259356:129335812933581293957600Corynebacterium diphtheriae VA01 chromosome, complete genomeN utilization substance protein B8e-1062.4
NC_016785:1297208:130814113081411308740600Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomeN utilization substance protein B7e-1062.4
NC_016789:1334514:137236513723651372964600Corynebacterium diphtheriae PW8 chromosome, complete genomeN utilization substance protein B7e-1062.4
NC_016800:1344189:135512213551221355721600Corynebacterium diphtheriae BH8 chromosome, complete genomeN utilization substance protein B7e-1062.4
NC_016801:1361597:137168513716851372284600Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeN utilization substance protein B7e-1062.4
NC_002935:1315019:135286613528661353414549Corynebacterium diphtheriae NCTC 13129, complete genometranscription antitermination protein NusB1e-0961.6
NC_016783:1313008:135085713508571351456600Corynebacterium diphtheriae INCA 402 chromosome, complete genomeN utilization substance protein B-like protein2e-0961.2
NC_016788:1315877:132596813259681326567600Corynebacterium diphtheriae HC04 chromosome, complete genomeN utilization substance protein B2e-0961.2
NC_016802:1317365:132745713274571328056600Corynebacterium diphtheriae HC02 chromosome, complete genomeN utilization substance protein B2e-0961.2
NC_011244:94756:117305117305117745441Borrelia recurrentis A1, complete genometranscription antitermination protein NusB3e-0960.8
NC_016048:2243108:224439022443902244842453Oscillibacter valericigenes Sjm18-20, complete genomeantitermination protein NusB3e-0960.5
NC_010475:953618:961936961936962577642Synechococcus sp. PCC 7002, complete genometranscription antitermination factor NusB4e-0960.1
NC_015185:875324:887673887673888095423Desulfurobacterium thermolithotrophum DSM 11699 chromosome,NusB antitermination factor7e-0959.3
NC_007925:2892371:289237128923712892880510Rhodopseudomonas palustris BisB18, complete genomeNusB antitermination factor2e-0858.2
NC_011661:1049767:106035510603551060789435Dictyoglomus turgidum DSM 6724, complete genomeNusB antitermination factor3e-0857.4
NC_020411:558153:563101563101563520420Hydrogenobaculum sp. HO, complete genomeNusB antitermination factor3e-0857.4
NC_015587:558180:563128563128563547420Hydrogenobaculum sp. SHO chromosome, complete genomeNusB antitermination factor3e-0857.4
NC_015557:558127:563075563075563494420Hydrogenobaculum sp. 3684 chromosome, complete genomeNusB antitermination factor3e-0857.4
NC_014638:1509637:151431515143151514986672Bifidobacterium bifidum PRL2010 chromosome, complete genomen utilization substance protein B NusB7e-0855.8
NC_011126:555483:574205574205574624420Hydrogenobaculum sp. Y04AAS1, complete genomeNusB antitermination factor1e-0755.1
NC_010830:475248:4891174891174902531137Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein4e-0753.1
NC_010544:850502:874559874559874975417Candidatus Phytoplasma australiense, complete genomeTranscription termination factor2e-0651.2
NC_020134:2237421:2243462224346222448111350Clostridium stercorarium subsp. stercorarium DSM 8532, completeribosomal RNA small subunit methyltransferase B4e-0650.1
NC_015873:1901939:1926015192601519273551341Megasphaera elsdenii DSM 20460, complete genomeribosomal RNA small subunit methyltransferase B6e-0649.7
NC_015499:119200:130723130723131127405Thermodesulfobium narugense DSM 14796 chromosome, complete genomeNusB antitermination factor7e-0649.3